BLASTX nr result

ID: Atractylodes22_contig00008343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00008343
         (1986 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40579.3| unnamed protein product [Vitis vinifera]               72   5e-10
ref|XP_002264456.1| PREDICTED: uncharacterized protein LOC100241...    72   5e-10
emb|CAN69136.1| hypothetical protein VITISV_019124 [Vitis vinifera]    72   5e-10
ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcript...    59   6e-10
gb|ABK28243.1| unknown [Arabidopsis thaliana]                          59   6e-10

>emb|CBI40579.3| unnamed protein product [Vitis vinifera]
          Length = 617

 Score = 72.0 bits (175), Expect = 5e-10
 Identities = 32/46 (69%), Positives = 39/46 (84%)
 Frame = +2

Query: 1847 RLLLSSSVDNTVRM*QAGHNECLKSFTQNNYVTCVEFNPMNDNYFI 1984
            + LLSSSVD TVR+ Q G N+CLK F+ NNYVTCV+FNP++DNYFI
Sbjct: 336  KYLLSSSVDKTVRLWQVGCNQCLKVFSHNNYVTCVQFNPVDDNYFI 381


>ref|XP_002264456.1| PREDICTED: uncharacterized protein LOC100241604 [Vitis vinifera]
          Length = 753

 Score = 72.0 bits (175), Expect = 5e-10
 Identities = 32/46 (69%), Positives = 39/46 (84%)
 Frame = +2

Query: 1847 RLLLSSSVDNTVRM*QAGHNECLKSFTQNNYVTCVEFNPMNDNYFI 1984
            + LLSSSVD TVR+ Q G N+CLK F+ NNYVTCV+FNP++DNYFI
Sbjct: 392  KYLLSSSVDKTVRLWQVGCNQCLKVFSHNNYVTCVQFNPVDDNYFI 437


>emb|CAN69136.1| hypothetical protein VITISV_019124 [Vitis vinifera]
          Length = 717

 Score = 72.0 bits (175), Expect = 5e-10
 Identities = 32/46 (69%), Positives = 39/46 (84%)
 Frame = +2

Query: 1847 RLLLSSSVDNTVRM*QAGHNECLKSFTQNNYVTCVEFNPMNDNYFI 1984
            + LLSSSVD TVR+ Q G N+CLK F+ NNYVTCV+FNP++DNYFI
Sbjct: 344  KYLLSSSVDKTVRLWQVGCNQCLKVFSHNNYVTCVQFNPVDDNYFI 389


>ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
            protein [Arabidopsis thaliana]
            gi|5732057|gb|AAD48956.1|AF149414_5 contains similarity
            to a family of Arabidopsis thaliana predicted proteins,
            which have similarity to reverse transcriptases; see
            T14P8.10 (GB:AF069298) [Arabidopsis thaliana]
            gi|7267223|emb|CAB80830.1| AT4g04650 [Arabidopsis
            thaliana] gi|332657009|gb|AEE82409.1| RNA-directed DNA
            polymerase (reverse transcriptase)-related family protein
            [Arabidopsis thaliana]
          Length = 332

 Score = 58.9 bits (141), Expect(3) = 6e-10
 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
 Frame = -1

Query: 1083 DNVMWRNN-GGGNVRFSSKAVWDSLLPSAANVDWHEVVWPKVRIPKHTFTLWLAARNGLA 907
            D+ +W+ +    + RFS+   W +L P +  V WH+ VW K  +PKH F  W+ A N L 
Sbjct: 96   DSFLWKTDLHAPSNRFSAPRTWSALHPQSHTVPWHKAVWFKNHVPKHAFICWVVAWNRLH 155

Query: 906  TQERLILW 883
            T++RL  W
Sbjct: 156  TRDRLQNW 163



 Score = 31.6 bits (70), Expect(3) = 6e-10
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = -3

Query: 676 IMRLCFAASIYHLWLERNRRVFQKQELKVENVVKRI 569
           I+RL F + +Y +W ERN+R+        E+++K I
Sbjct: 229 IIRLAFHSCVYAIWRERNQRLHSGVSRSTESILKDI 264



 Score = 20.8 bits (42), Expect(3) = 6e-10
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -2

Query: 854 LFCECVPDSIKHFFSLAKQSTIVW 783
           L C    DS  H F   + S +VW
Sbjct: 172 LLCNAHDDSRAHLFFECQFSGVVW 195


>gb|ABK28243.1| unknown [Arabidopsis thaliana]
          Length = 297

 Score = 58.9 bits (141), Expect(3) = 6e-10
 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
 Frame = -1

Query: 1083 DNVMWRNN-GGGNVRFSSKAVWDSLLPSAANVDWHEVVWPKVRIPKHTFTLWLAARNGLA 907
            D+ +W+ +    + RFS+   W +L P +  V WH+ VW K  +PKH F  W+ A N L 
Sbjct: 96   DSFLWKTDLHAPSNRFSAPRTWSALHPQSHTVPWHKAVWFKNHVPKHAFICWVVAWNRLH 155

Query: 906  TQERLILW 883
            T++RL  W
Sbjct: 156  TRDRLQNW 163



 Score = 31.6 bits (70), Expect(3) = 6e-10
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = -3

Query: 676 IMRLCFAASIYHLWLERNRRVFQKQELKVENVVKRI 569
           I+RL F + +Y +W ERN+R+        E+++K I
Sbjct: 229 IIRLAFHSCVYAIWRERNQRLHSGVSRSTESILKDI 264



 Score = 20.8 bits (42), Expect(3) = 6e-10
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -2

Query: 854 LFCECVPDSIKHFFSLAKQSTIVW 783
           L C    DS  H F   + S +VW
Sbjct: 172 LLCNAHDDSRAHLFFECQFSGVVW 195


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