BLASTX nr result

ID: Atractylodes22_contig00008335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00008335
         (1015 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273461.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   199   7e-49
ref|XP_002311305.1| predicted protein [Populus trichocarpa] gi|2...   188   2e-45
gb|ABK96350.1| unknown [Populus trichocarpa x Populus deltoides]      188   2e-45
ref|XP_002316133.1| predicted protein [Populus trichocarpa] gi|1...   186   8e-45
ref|XP_002522447.1| zinc finger protein, putative [Ricinus commu...   184   2e-44

>ref|XP_002273461.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 233

 Score =  199 bits (507), Expect = 7e-49
 Identities = 116/220 (52%), Positives = 142/220 (64%), Gaps = 27/220 (12%)
 Frame = +2

Query: 200 MASDAEAS----VSSLIEGL---------MAMPFLSGVISTSPESDSDH---ESTDRPHP 331
           MAS++EAS     +S +E L         M +PF+ G   T+   +SD    E+TD P P
Sbjct: 1   MASESEASGASSSASFLERLISSRNRDLSMFIPFILGFTDTTTRQESDDPDDETTDTPTP 60

Query: 332 GSSLDRIILINPLTQGMVVIRGSATGFDSLLNDLMKKDGQPPASQASIDAMPTLEIRGTE 511
               DRIILINP TQGM+VI G+++ FDSLL +L  K GQPPA++ASI+AMP++E+ G +
Sbjct: 61  R---DRIILINPFTQGMIVIEGNSS-FDSLLRELASKGGQPPATKASIEAMPSVEVGGDD 116

Query: 512 EIENFGGECVICLKEWEVGDVAKEMPCKHKFHGECVEKWLKIHGSCPVCRHKMPVDDSD- 688
                 GECVICL+EW+VG VAKEMPCKHKFH  C+ KWL IHGSCPVCRHKMPVD+ D 
Sbjct: 117 ------GECVICLEEWKVGCVAKEMPCKHKFHENCIVKWLGIHGSCPVCRHKMPVDEEDL 170

Query: 689 -KK----FADESGR-----RREIWVTLSFGSGSEEERPNQ 778
            KK      DE GR      REIWV+ SF S S     NQ
Sbjct: 171 GKKREGSVGDEEGRGRRRVEREIWVSFSFNSNSRRNDSNQ 210


>ref|XP_002311305.1| predicted protein [Populus trichocarpa] gi|222851125|gb|EEE88672.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  188 bits (478), Expect = 2e-45
 Identities = 104/210 (49%), Positives = 135/210 (64%), Gaps = 17/210 (8%)
 Frame = +2

Query: 200 MASDAE--ASVSSLIEGLMA-------MPFLSGVISTSPESDSDHESTDRPHPGSSLDRI 352
           MAS+ E  A +SS+ E L+        +PF+ G  ST+   + D +    P      +RI
Sbjct: 1   MASETELPAELSSMFERLLRHRDLSLFLPFIFGFTSTNSTEERDPDQ--EPQTTDPNERI 58

Query: 353 ILINPLTQGMVVIRGSATGFDSLLNDLMKKDGQPPASQASIDAMPTLEIRGTEEIENFGG 532
           ILINPLTQGMVVI G+A+  +SLL D+  K+GQPPAS+ASI+AMP++EI      +N  G
Sbjct: 59  ILINPLTQGMVVIEGAAS-LESLLRDIGNKNGQPPASKASIEAMPSVEIGE----DNKDG 113

Query: 533 ECVICLKEWEVGDVAKEMPCKHKFHGECVEKWLKIHGSCPVCRHKMPVDDSD---KKFAD 703
           EC ICL+EWE G V KEMPCKH+FHG CVEKWLKIHG+CPVCR+KMPVD+ +   K+   
Sbjct: 114 ECAICLEEWEPGAVVKEMPCKHRFHGNCVEKWLKIHGNCPVCRYKMPVDEEELGKKRDGG 173

Query: 704 ESGR-----RREIWVTLSFGSGSEEERPNQ 778
           + GR      REIWV+ +F         N+
Sbjct: 174 DGGREWRRAEREIWVSFAFNGNRRNRDSNE 203


>gb|ABK96350.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 225

 Score =  188 bits (478), Expect = 2e-45
 Identities = 104/210 (49%), Positives = 135/210 (64%), Gaps = 17/210 (8%)
 Frame = +2

Query: 200 MASDAE--ASVSSLIEGLMA-------MPFLSGVISTSPESDSDHESTDRPHPGSSLDRI 352
           MAS+ E  A +SS+ E L+        +PF+ G  ST+   + D +    P      +RI
Sbjct: 1   MASETELPAELSSMFERLLRHRDLSLFLPFIFGFTSTNSTEERDPDQ--EPQTTDPNERI 58

Query: 353 ILINPLTQGMVVIRGSATGFDSLLNDLMKKDGQPPASQASIDAMPTLEIRGTEEIENFGG 532
           ILINPLTQGMVVI G+A+  +SLL D+  K+GQPPAS+ASI+AMP++EI      +N  G
Sbjct: 59  ILINPLTQGMVVIEGAAS-LESLLRDMGNKNGQPPASKASIEAMPSVEIGE----DNKDG 113

Query: 533 ECVICLKEWEVGDVAKEMPCKHKFHGECVEKWLKIHGSCPVCRHKMPVDDSD---KKFAD 703
           EC ICL+EWE G V KEMPCKH+FHG CVEKWLKIHG+CPVCR+KMPVD+ +   K+   
Sbjct: 114 ECAICLEEWEPGAVVKEMPCKHRFHGNCVEKWLKIHGNCPVCRYKMPVDEEELGKKRDGG 173

Query: 704 ESGR-----RREIWVTLSFGSGSEEERPNQ 778
           + GR      REIWV+ +F         N+
Sbjct: 174 DGGREWRRAEREIWVSFAFNGNRRNRDSNE 203


>ref|XP_002316133.1| predicted protein [Populus trichocarpa] gi|118483434|gb|ABK93617.1|
           unknown [Populus trichocarpa]
           gi|222865173|gb|EEF02304.1| predicted protein [Populus
           trichocarpa]
          Length = 218

 Score =  186 bits (472), Expect = 8e-45
 Identities = 107/214 (50%), Positives = 137/214 (64%), Gaps = 22/214 (10%)
 Frame = +2

Query: 200 MASDAE--ASVSSLIEGLMA-------MPFLSGVISTSP--ESDSDHESTDRPHPGSSLD 346
           MAS+ E  A  SS+ E L+        +PF+ G  ST+   + D D E+     P    +
Sbjct: 1   MASETEFPAEFSSMFERLLRHRDLSLFLPFILGFTSTNTTEQRDPDQEAPQTTDPN---E 57

Query: 347 RIILINPLTQGMVVIRGSATGFDSLLNDLMKKDGQPPASQASIDAMPTLEIRGTEEIENF 526
           RIILINP TQGMVVI G+A+  +SLL D+  K GQPPAS+ASI+AMP +EI      +N 
Sbjct: 58  RIILINPFTQGMVVIEGAAS-LESLLRDIGNKKGQPPASKASIEAMPKVEIGE----DNK 112

Query: 527 GGECVICLKEWEVGDVAKEMPCKHKFHGECVEKWLKIHGSCPVCRHKMPVDDSD---KKF 697
            GEC ICL+EWE+G V KEMPCKH+FHG CVEKWLKIHG+CPVCR+KMPVD+ +   K+ 
Sbjct: 113 DGECAICLEEWELGGVVKEMPCKHRFHGGCVEKWLKIHGNCPVCRYKMPVDEEELGKKRD 172

Query: 698 ADESGR----RREIWVTLSFG----SGSEEERPN 775
             + GR     REIWV+ +F     +G   E P+
Sbjct: 173 EGDGGRERRVEREIWVSFAFNGSRRNGDSNENPS 206


>ref|XP_002522447.1| zinc finger protein, putative [Ricinus communis]
           gi|223538332|gb|EEF39939.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 233

 Score =  184 bits (468), Expect = 2e-44
 Identities = 94/182 (51%), Positives = 126/182 (69%), Gaps = 10/182 (5%)
 Frame = +2

Query: 254 MPFLSGVISTSPESDSDHESTDRPHPGSSLDRIILINPLTQGMVVIRGSATGFDSLLNDL 433
           +PF+ G  ST+  +++++   +     S  +RIILINP TQGMVVI G+ +  DSLL +L
Sbjct: 27  LPFILGFTSTTTNTNTENPDQENQETTSRHERIILINPFTQGMVVIEGTES-LDSLLREL 85

Query: 434 MKKDGQPPASQASIDAMPTLEIRGTEEIENFGGECVICLKEWEVGD--VAKEMPCKHKFH 607
             K+G PPAS+ASI+++P++++   +EI +   EC ICL+EWE+G   V KEMPCKH+FH
Sbjct: 86  AAKNGHPPASRASIESLPSVDV---QEIGDRDSECAICLEEWEIGAGAVVKEMPCKHRFH 142

Query: 608 GECVEKWLKIHGSCPVCRHKMPVDD---SDKKFADESG-----RRREIWVTLSFGSGSEE 763
           G C+EKWL IHGSCPVCR+KMPVDD   S K+  +E G     RRREIWV+ SF S S  
Sbjct: 143 GNCIEKWLGIHGSCPVCRYKMPVDDEELSKKRDHEEEGEGGRERRREIWVSFSFNSSSSN 202

Query: 764 ER 769
            R
Sbjct: 203 RR 204