BLASTX nr result

ID: Atractylodes22_contig00008303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00008303
         (1060 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330570.1| high mobility group family [Populus trichoca...   290   4e-76
ref|XP_002531766.1| transcription factor, putative [Ricinus comm...   287   4e-75
ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 ...   263   7e-68
ref|XP_002518095.1| transcription factor, putative [Ricinus comm...   234   2e-59
ref|XP_003527572.1| PREDICTED: LOW QUALITY PROTEIN: high mobilit...   232   1e-58

>ref|XP_002330570.1| high mobility group family [Populus trichocarpa]
           gi|222872128|gb|EEF09259.1| high mobility group family
           [Populus trichocarpa]
          Length = 316

 Score =  290 bits (742), Expect = 4e-76
 Identities = 146/278 (52%), Positives = 194/278 (69%), Gaps = 15/278 (5%)
 Frame = -1

Query: 982 GTPTTSYPSPEASYEEITQNPQFFLEKLQIFHSIFGTKFKIPIIGGKSLDLHRLFIEVTS 803
           G    SYP   A YE+I Q+   F EKL+ FH  FGTKF +P +GGK+LDLH LF+EVTS
Sbjct: 25  GQSFRSYPPATAKYEDIAQSSDLFWEKLKAFHQSFGTKFMVPTVGGKALDLHHLFVEVTS 84

Query: 802 RGGIEKIVSDRRWREVMAVFKFGPTITNASFVLRKYYLSLLYHFEQVYYFRKKTPTIVPA 623
           RGGIEK+++DR+W+EV+  F F  TIT+ASFVLRK+YLSLLYHFEQVY+F K+ P +   
Sbjct: 85  RGGIEKVITDRKWKEVITAFNFPTTITSASFVLRKHYLSLLYHFEQVYHFNKQIPLVSGT 144

Query: 622 DTTN--RLSDGSVS---GSVKNLFSARRIVEVGGQVTGTIDKRFDHGYVVTVDMGTEKLS 458
           D  N   L +GS +   G++ N FS+ + +++G  V+G ID +FD+GY+VTV++GT +L 
Sbjct: 145 DAMNGRSLVNGSATLEEGAITNQFSSSQQLQIGCSVSGIIDGKFDNGYLVTVNLGTNQLK 204

Query: 457 GFLYHLP---------SESPAPSHGTHDMYQLALREPS-PEPDVSGYDVFFTEHYIRLKP 308
           G LYH+P           S  P        +LALR+PS P+ + SGY+ FFTEHY +LKP
Sbjct: 205 GVLYHIPHTFHESQDSRSSDLPPRRRRKRSRLALRDPSQPKSNRSGYNFFFTEHYAQLKP 264

Query: 307 LYHGQENVIRKRIQVLWSTLTQEEKQVYQEKGSRGRER 194
           L+HGQE VI K+I +LW+ LT+ EKQVYQEKG R +E+
Sbjct: 265 LHHGQEKVISKKIGLLWNNLTEAEKQVYQEKGLRDKEK 302


>ref|XP_002531766.1| transcription factor, putative [Ricinus communis]
           gi|223528602|gb|EEF30622.1| transcription factor,
           putative [Ricinus communis]
          Length = 313

 Score =  287 bits (734), Expect = 4e-75
 Identities = 143/271 (52%), Positives = 190/271 (70%), Gaps = 13/271 (4%)
 Frame = -1

Query: 967 SYPSPEASYEEITQNPQFFLEKLQIFHSIFGTKFKIPIIGGKSLDLHRLFIEVTSRGGIE 788
           SYPSP A +E++ Q+   F EKL+ FH  FGTKF +P +GGK+LDLH LF+EVTSRGG+E
Sbjct: 29  SYPSPTAQFEDVVQSSDLFWEKLKSFHKSFGTKFMVPTVGGKALDLHHLFVEVTSRGGLE 88

Query: 787 KIVSDRRWREVMAVFKFGPTITNASFVLRKYYLSLLYHFEQVYYFRKKTPTIVPADTTN- 611
           K+V DR+W+EV+A F F  TIT+ASFVLRKYYLSLLYHFEQVY F K+ P++  +D  N 
Sbjct: 89  KVVRDRKWKEVIAAFNFPSTITSASFVLRKYYLSLLYHFEQVYQFHKQVPSVSVSDDVNG 148

Query: 610 RLSDGS--VSGSVKNLFSARRIVEVGGQVTGTIDKRFDHGYVVTVDMGTEKLSGFLYHLP 437
            L +GS  V G   N F     +++G  V GTID +FD+GY++TV +G+E+L G LYH+P
Sbjct: 149 NLVNGSATVEGVTVNQFPGSSQLQLGSSVNGTIDGKFDNGYLITVTLGSEQLKGVLYHIP 208

Query: 436 SE---------SPAPSHGTHDMYQLALREPS-PEPDVSGYDVFFTEHYIRLKPLYHGQEN 287
           +E         S  P        +L LR+PS P+   SGY+ FF EHY +LKPL++GQE 
Sbjct: 209 NEFYMSQSSHNSDLPPRRHRKRSRLLLRDPSRPKSHRSGYNFFFAEHYAQLKPLHYGQEK 268

Query: 286 VIRKRIQVLWSTLTQEEKQVYQEKGSRGRER 194
           VI K+I +LW+ LT+ EK++YQEKG + +ER
Sbjct: 269 VISKKIGLLWNNLTEAEKEIYQEKGLKDKER 299


>ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 [Vitis vinifera]
            gi|296090037|emb|CBI39856.3| unnamed protein product
            [Vitis vinifera]
          Length = 331

 Score =  263 bits (671), Expect = 7e-68
 Identities = 142/291 (48%), Positives = 186/291 (63%), Gaps = 18/291 (6%)
 Frame = -1

Query: 1012 PKTAVFTNGYGTPTTSYPSPEASYEEITQNPQFFLEKLQIFHSIFGTKFKIPIIGGKSLD 833
            P++   T  + +    YP   A Y+E+ Q+   F + L+ FH  FGTKF +P  GGK+LD
Sbjct: 24   PQSEAATPTHVSAHRPYPEAAAQYQEVVQSADLFWQTLKDFHRSFGTKFMVPTTGGKALD 83

Query: 832  LHRLFIEVTSRGGIEKIVSDRRWREVMAVFKFGPTITNASFVLRKYYLSLLYHFEQVYYF 653
            LHRLF+EVTSRGG+EK++ DR+W+EV  VFKF  TIT+ASFVLRKYYLSLL+H+EQVYYF
Sbjct: 84   LHRLFVEVTSRGGLEKVIRDRKWKEVTTVFKFPTTITSASFVLRKYYLSLLHHYEQVYYF 143

Query: 652  RKKTPTIVPADTTNRLS-DGSVS------GSVKNLFSARRIVEVGGQVTGTIDKRFDHGY 494
            RK++  I  AD  N    +GS +       +  N       ++ G  VTGTID +FD+GY
Sbjct: 144  RKQSFPISMADPLNSSPINGSATTPVFQDSATTNDLPVSPRLQPGCLVTGTIDGKFDNGY 203

Query: 493  VVTVDMGTEKLSGFLYHLPSE----------SPAPSHGTHDMYQLALREPS-PEPDVSGY 347
            +V+V++G++ L G LYH+P+           S  P        QLALR+PS P+   SGY
Sbjct: 204  LVSVNLGSDVLKGVLYHIPNNESHMSRSSNASAVPPPRNWKRSQLALRDPSRPKRSQSGY 263

Query: 346  DVFFTEHYIRLKPLYHGQENVIRKRIQVLWSTLTQEEKQVYQEKGSRGRER 194
            + FF E+Y RLKPLY GQE  I K+I  LW+ LT  EKQVYQEKG   +ER
Sbjct: 264  NFFFAENYARLKPLYSGQERAISKKIGFLWNRLTDAEKQVYQEKGMIDKER 314


>ref|XP_002518095.1| transcription factor, putative [Ricinus communis]
           gi|223542691|gb|EEF44228.1| transcription factor,
           putative [Ricinus communis]
          Length = 466

 Score =  234 bits (598), Expect = 2e-59
 Identities = 127/301 (42%), Positives = 175/301 (58%), Gaps = 44/301 (14%)
 Frame = -1

Query: 964 YPSPEASYEEITQNPQFFLEKLQIFHSIFGTKFKIPIIGGKSLDLHRLFIEVTSRGGIEK 785
           YP+P+A YE++  +P+ F+  L+  H+  GTKF IPIIGG+ LDLHRLF+EVTSRGG+EK
Sbjct: 24  YPAPQARYEDVASDPKLFMSTLESLHAAMGTKFMIPIIGGRELDLHRLFVEVTSRGGLEK 83

Query: 784 IVSDRRWREVMAVFKFGPTITNASFVLRKYYLSLLYHFEQVYYFRKK--TP--------- 638
           I+ +RRW+EV A+F F  T TNASFVLRKYY SLL+H+EQ+Y+F+ +  TP         
Sbjct: 84  IIRERRWKEVTAIFNFPSTATNASFVLRKYYGSLLHHYEQLYFFKARGWTPGSSVPMQSP 143

Query: 637 ---------TIVPADTTNRLSDGSVSGSVKNLFSARRIVEVGGQVTGTIDKRFDHGYVVT 485
                    T+ P+      +      +   L+ AR       QV G ID +F+ GY+VT
Sbjct: 144 LASRLPAQVTVQPSPEYQAATAQQQRTNTAELYGARIASSGSSQVMGVIDGKFESGYLVT 203

Query: 484 VDMGTEKLSGFLYHLPSESPA--------PSHGTHD---------------MYQLALREP 374
           V +GTEKL G LY  P   P         P++ T D                 ++  R+P
Sbjct: 204 VTIGTEKLKGVLYQAPQNHPGQEPQSYSIPANNTGDARAASGMQRRRRRRKKNEIKRRDP 263

Query: 373 S-PEPDVSGYDVFFTEHYIRLKPLYHGQENVIRKRIQVLWSTLTQEEKQVYQEKGSRGRE 197
           + P+P+ SGY+ FF E + RLKPLY G++  I + I  LWS + + EK VYQEK  + +E
Sbjct: 264 AHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGELWSNVNETEKAVYQEKAVKDKE 323

Query: 196 R 194
           R
Sbjct: 324 R 324


>ref|XP_003527572.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group B protein
           10-like [Glycine max]
          Length = 339

 Score =  232 bits (591), Expect = 1e-58
 Identities = 134/296 (45%), Positives = 172/296 (58%), Gaps = 35/296 (11%)
 Frame = -1

Query: 976 PTTSYPSPEASYEEITQNPQFFLEKLQIFHSIFGTKFKIPIIGGKSLDLHRLFIEVTSRG 797
           PT  YP+P A Y++I ++   F   LQ FH   GTK+KI  +GG  LDLHRLF+EVTSRG
Sbjct: 34  PTKLYPAPTARYQDIVRDANLFWGTLQAFHKTLGTKYKISTVGGTPLDLHRLFVEVTSRG 93

Query: 796 GIEKIVSDRRWREVMAVFKFGPTITNASFVLRKYYLSLLYHFEQVYYF-RKKTPTIVPAD 620
           GIEK++ DR+W+EV+  F F  TITNASF++RK YLS+LYHFEQVYYF R+  P   P  
Sbjct: 94  GIEKVIVDRKWKEVILTFNFKDTITNASFMVRKSYLSMLYHFEQVYYFGRQGIPPTTP-- 151

Query: 619 TTNRLSDGSVSGSVKNLFSARRIVEVGG----------------QVTGTIDKRFDHGYVV 488
                 D  + G     +S+  I EV                   V+GTID +FD GYVV
Sbjct: 152 ------DLMIRGQSCQPYSSTTIPEVAAVNDSPVQSTPVQAHDDMVSGTIDAKFDVGYVV 205

Query: 487 TVDMGTEKLS----GFLYHLPSESPAPSHGTHDMY-------------QLALREP-SPEP 362
           TV +G+E+L      FL   P      +H  H +              + A R+P  P+ 
Sbjct: 206 TVTLGSEQLQVSCFMFLITCPRVLMPKAHLVHRILVMTRXNLQSRKRAKYAPRDPFRPKS 265

Query: 361 DVSGYDVFFTEHYIRLKPLYHGQENVIRKRIQVLWSTLTQEEKQVYQEKGSRGRER 194
           + SGY+ FF E+Y RLKP YHGQE  I KRI  LW+ L++ E+QVYQEKG R +ER
Sbjct: 266 NRSGYNFFFAENYARLKPSYHGQERAISKRIGFLWNNLSEAERQVYQEKGIRDKER 321


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