BLASTX nr result

ID: Atractylodes22_contig00008208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00008208
         (806 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632111.1| PREDICTED: 60S ribosomal protein L12-like [V...   318   9e-85
ref|XP_002281255.1| PREDICTED: 60S ribosomal protein L12 [Vitis ...   316   4e-84
ref|XP_002530279.1| 60S ribosomal protein L12, putative [Ricinus...   315   6e-84
ref|XP_002274407.1| PREDICTED: 60S ribosomal protein L12 [Vitis ...   315   1e-83
gb|ADR71265.1| 60S ribosomal protein L12A [Hevea brasiliensis]        313   3e-83

>ref|XP_003632111.1| PREDICTED: 60S ribosomal protein L12-like [Vitis vinifera]
          Length = 166

 Score =  318 bits (815), Expect = 9e-85
 Identities = 160/166 (96%), Positives = 165/166 (99%)
 Frame = +2

Query: 44  MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 223
           MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60

Query: 224 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKVMRPR 403
           VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKK KNIKH+GNISLDDVIEIAK+MRPR
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKIMRPR 120

Query: 404 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIADGDVEIPLD 541
           SMAK+L+G+VKEILGTCVSVGCTVDGKDPKDLQQEIADGDVEIPLD
Sbjct: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEIADGDVEIPLD 166


>ref|XP_002281255.1| PREDICTED: 60S ribosomal protein L12 [Vitis vinifera]
           gi|147835636|emb|CAN66258.1| hypothetical protein
           VITISV_001237 [Vitis vinifera]
          Length = 166

 Score =  316 bits (809), Expect = 4e-84
 Identities = 159/166 (95%), Positives = 164/166 (98%)
 Frame = +2

Query: 44  MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 223
           MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60

Query: 224 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKVMRPR 403
           VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKK KNIKH+GNISLDDVIEIAK+MRPR
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKIMRPR 120

Query: 404 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIADGDVEIPLD 541
           SMAK+L+G+VKEILGTCVSVGCTVDGKDPKDLQQEIADGDVEIP D
Sbjct: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEIADGDVEIPQD 166


>ref|XP_002530279.1| 60S ribosomal protein L12, putative [Ricinus communis]
           gi|223530177|gb|EEF32086.1| 60S ribosomal protein L12,
           putative [Ricinus communis]
          Length = 166

 Score =  315 bits (808), Expect = 6e-84
 Identities = 158/166 (95%), Positives = 164/166 (98%)
 Frame = +2

Query: 44  MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 223
           MPPKFDPSQVVDV+VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60

Query: 224 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKVMRPR 403
           VKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKK KNIKHSGNISLDDVIEIAKVM+PR
Sbjct: 61  VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKTKNIKHSGNISLDDVIEIAKVMKPR 120

Query: 404 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIADGDVEIPLD 541
           SMAK+L+GTVKEILGTCVSVGCTVDGKDPKDLQQEI DGDVE+PLD
Sbjct: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPLD 166


>ref|XP_002274407.1| PREDICTED: 60S ribosomal protein L12 [Vitis vinifera]
           gi|147785001|emb|CAN75443.1| hypothetical protein
           VITISV_019658 [Vitis vinifera]
          Length = 166

 Score =  315 bits (806), Expect = 1e-83
 Identities = 158/166 (95%), Positives = 164/166 (98%)
 Frame = +2

Query: 44  MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 223
           MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60

Query: 224 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKVMRPR 403
           VKLTVQNRQAKVSVVPSAAALVIK+LKEPERDRKK KNIKH+GNISLDDVIEIA+VMRPR
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKSLKEPERDRKKTKNIKHNGNISLDDVIEIARVMRPR 120

Query: 404 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIADGDVEIPLD 541
           SMAK+L+GTVKEILGTCVSVGCTVDGKDPKDLQQEIADGDVE+P D
Sbjct: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEIADGDVEVPED 166


>gb|ADR71265.1| 60S ribosomal protein L12A [Hevea brasiliensis]
          Length = 166

 Score =  313 bits (802), Expect = 3e-83
 Identities = 157/166 (94%), Positives = 164/166 (98%)
 Frame = +2

Query: 44  MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 223
           MPPKFDPSQVVDV+VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60

Query: 224 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKVMRPR 403
           VKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKK KNIKHSGNISLDDVIEIAKVMRPR
Sbjct: 61  VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKTKNIKHSGNISLDDVIEIAKVMRPR 120

Query: 404 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIADGDVEIPLD 541
           SMAK+L+GTVKEILGTCVSVGCTVDGK+PKDLQQEI DG+VE+PLD
Sbjct: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKNPKDLQQEITDGEVEVPLD 166


Top