BLASTX nr result

ID: Atractylodes22_contig00008131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00008131
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273034.2| PREDICTED: structural maintenance of chromos...   107   8e-22
emb|CBI37123.3| unnamed protein product [Vitis vinifera]              107   8e-22
ref|XP_002307647.1| condensin complex components subunit [Populu...    99   3e-19
ref|XP_002532030.1| Structural maintenance of chromosome 1 prote...    97   1e-18
ref|XP_002444536.1| hypothetical protein SORBIDRAFT_07g023430 [S...    96   3e-18

>ref|XP_002273034.2| PREDICTED: structural maintenance of chromosomes protein 1A-like
            [Vitis vinifera]
          Length = 1309

 Score =  107 bits (268), Expect = 8e-22
 Identities = 58/115 (50%), Positives = 79/115 (68%), Gaps = 13/115 (11%)
 Frame = +2

Query: 179  QLPSKCKLEQIILPTVA--------APVPVYDFSQLSSSHQQKMIPAEREKLEAEFNQKI 334
            ++  KC++E IILPTV+         P PV+DFSQL+ SHQ  M P+EREK+E EF QK+
Sbjct: 1020 EILEKCEVEHIILPTVSDAMEIGSSMPSPVFDFSQLNRSHQVDMRPSEREKVEVEFKQKM 1079

Query: 335  GGIISEIDSTAPN-----QYAALQEKERAASKELKEAREEEQQIGKQFESVRNRR 484
              +ISEI+ TAPN     QY ALQEKER  ++E + AR+EE++I  ++ SV+ RR
Sbjct: 1080 DALISEIERTAPNLKALDQYEALQEKERHVTEEFEVARKEEKEITDKYNSVKQRR 1134


>emb|CBI37123.3| unnamed protein product [Vitis vinifera]
          Length = 2295

 Score =  107 bits (268), Expect = 8e-22
 Identities = 58/115 (50%), Positives = 79/115 (68%), Gaps = 13/115 (11%)
 Frame = +2

Query: 179  QLPSKCKLEQIILPTVA--------APVPVYDFSQLSSSHQQKMIPAEREKLEAEFNQKI 334
            ++  KC++E IILPTV+         P PV+DFSQL+ SHQ  M P+EREK+E EF QK+
Sbjct: 2006 EILEKCEVEHIILPTVSDAMEIGSSMPSPVFDFSQLNRSHQVDMRPSEREKVEVEFKQKM 2065

Query: 335  GGIISEIDSTAPN-----QYAALQEKERAASKELKEAREEEQQIGKQFESVRNRR 484
              +ISEI+ TAPN     QY ALQEKER  ++E + AR+EE++I  ++ SV+ RR
Sbjct: 2066 DALISEIERTAPNLKALDQYEALQEKERHVTEEFEVARKEEKEITDKYNSVKQRR 2120


>ref|XP_002307647.1| condensin complex components subunit [Populus trichocarpa]
            gi|222857096|gb|EEE94643.1| condensin complex components
            subunit [Populus trichocarpa]
          Length = 1232

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 66/151 (43%), Positives = 89/151 (58%), Gaps = 21/151 (13%)
 Frame = +2

Query: 95   KEETKKHYCF-SILCHGSSILGCKEALITQLPS-------KCKLEQIILPTVAAPV---- 238
            +E TKK     S L   + ++  KE  I QL S       KC+LE I LPTV+ P+    
Sbjct: 908  REWTKKGSAVTSNLSKLTRLINSKETQIAQLSSWKQDIVEKCELENINLPTVSDPMDIDS 967

Query: 239  ----PVYDFSQLSSSHQQKMIPAEREKLEAEFNQKIGGIISEIDSTAPN-----QYAALQ 391
                P YDFSQL+ S Q +  P+ REK+EA+F QKI  +ISEI+ TAPN     QY AL+
Sbjct: 968  PIPGPDYDFSQLNRSLQDRR-PSVREKIEADFKQKIDALISEIEKTAPNLKALDQYEALR 1026

Query: 392  EKERAASKELKEAREEEQQIGKQFESVRNRR 484
            E+ER  ++E + AR+EE+QI   +  V+ RR
Sbjct: 1027 ERERVVTEEFEAARKEEKQIADSYNGVKQRR 1057


>ref|XP_002532030.1| Structural maintenance of chromosome 1 protein, putative [Ricinus
            communis] gi|223528300|gb|EEF30346.1| Structural
            maintenance of chromosome 1 protein, putative [Ricinus
            communis]
          Length = 1220

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 57/131 (43%), Positives = 80/131 (61%), Gaps = 20/131 (15%)
 Frame = +2

Query: 152  LGCKEALITQLPS-------KCKLEQIILPTVAAPV--------PVYDFSQLSSSHQQKM 286
            +  KE  I QL S       KC+LE I LPT++ P+        P +DFS+L+ S  Q  
Sbjct: 915  INSKEGQIEQLLSRKQDIVEKCELEHINLPTISDPMEVDSMIPGPFFDFSELNRSLLQDR 974

Query: 287  IPAEREKLEAEFNQKIGGIISEIDSTAPN-----QYAALQEKERAASKELKEAREEEQQI 451
             P++REKLE +F QK+  I+SEI+ TAPN     QY ALQEKER  ++E + AR+EE+++
Sbjct: 975  RPSDREKLEVDFKQKMDAIMSEIEKTAPNLKALDQYEALQEKERVVTEEFEAARKEEKRV 1034

Query: 452  GKQFESVRNRR 484
               + SV+ RR
Sbjct: 1035 ADAYNSVKQRR 1045


>ref|XP_002444536.1| hypothetical protein SORBIDRAFT_07g023430 [Sorghum bicolor]
            gi|241940886|gb|EES14031.1| hypothetical protein
            SORBIDRAFT_07g023430 [Sorghum bicolor]
          Length = 1253

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 55/128 (42%), Positives = 81/128 (63%), Gaps = 20/128 (15%)
 Frame = +2

Query: 161  KEALITQLPS-------KCKLEQIILPTVAAPV--------PVYDFSQLSSSHQQKMIPA 295
            KEA + QL S       KC+LEQ+ LPTV  P+        P+ D+SQLS SH Q + P+
Sbjct: 951  KEAQLAQLISRQREVHEKCELEQLKLPTVNDPMDTGTSSQEPILDYSQLSKSHLQDIRPS 1010

Query: 296  EREKLEAEFNQKIGGIISEIDSTAPN-----QYAALQEKERAASKELKEAREEEQQIGKQ 460
            ER+K EAEF ++ G ++++I+ TAPN     QY ALQ KE+  ++  + AR+EE++I  +
Sbjct: 1011 ERDKHEAEFKKRTGVLLADIERTAPNLKALDQYDALQRKEKEVTERFEAARKEEREIADK 1070

Query: 461  FESVRNRR 484
            + SV+ RR
Sbjct: 1071 YNSVKQRR 1078


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