BLASTX nr result

ID: Atractylodes22_contig00008126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00008126
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002876806.1| hypothetical protein ARALYDRAFT_322561 [Arab...    60   3e-07
dbj|BAD22387.1| F-box family protein-like [Oryza sativa Japonica...    59   4e-07
gb|EAZ25046.1| hypothetical protein OsJ_08836 [Oryza sativa Japo...    59   4e-07
ref|NP_973399.1| F-box protein [Arabidopsis thaliana] gi|1222136...    59   6e-07
ref|XP_002892485.1| phloem protein 2-B15 [Arabidopsis lyrata sub...    56   3e-06

>ref|XP_002876806.1| hypothetical protein ARALYDRAFT_322561 [Arabidopsis lyrata subsp.
           lyrata] gi|297322644|gb|EFH53065.1| hypothetical protein
           ARALYDRAFT_322561 [Arabidopsis lyrata subsp. lyrata]
          Length = 317

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
 Frame = -1

Query: 286 QSRFQQGIEILSQQVFRIKCKIKSQMLLSHTNYVCYLVFKLSEKCCGL-HCPVKVRDILH 110
           +SRF++  E+L+   F I+ K  +++L   T Y  Y+VFK ++ C GL H PV+V   L 
Sbjct: 176 ESRFEKVAELLNVCWFEIRGKTSTRLLSPGTRYSAYIVFKTNDGCPGLGHLPVEVGLGLV 235

Query: 109 WKNKKKEILYFRSPRPWNL-HDTHHA--PKKREDGWME 5
            +   K  +YF  PR      +T     P++REDGWME
Sbjct: 236 GQESSKRFIYFVGPRDRRRGRETRDVTKPEQREDGWME 273


>dbj|BAD22387.1| F-box family protein-like [Oryza sativa Japonica Group]
          Length = 198

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 32/99 (32%), Positives = 53/99 (53%)
 Frame = -1

Query: 298 KFFRQSRFQQGIEILSQQVFRIKCKIKSQMLLSHTNYVCYLVFKLSEKCCGLHCPVKVRD 119
           K F  +RF++G E++      I+C I S+ML  ++ Y  ++VFK++E   GL  P++   
Sbjct: 56  KPFLYNRFEEGAELIDVCWMEIRCNIDSKMLSPNSTYAAFMVFKIAEGFYGLDTPLQEGT 115

Query: 118 ILHWKNKKKEILYFRSPRPWNLHDTHHAPKKREDGWMEV 2
           +     + +  + F S  P     +   P+KR DGWMEV
Sbjct: 116 VSLGGRESRREVAFTSIDPRPPQGSAAYPQKRADGWMEV 154


>gb|EAZ25046.1| hypothetical protein OsJ_08836 [Oryza sativa Japonica Group]
          Length = 171

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 32/99 (32%), Positives = 53/99 (53%)
 Frame = -1

Query: 298 KFFRQSRFQQGIEILSQQVFRIKCKIKSQMLLSHTNYVCYLVFKLSEKCCGLHCPVKVRD 119
           K F  +RF++G E++      I+C I S+ML  ++ Y  ++VFK++E   GL  P++   
Sbjct: 29  KPFLYNRFEEGAELIDVCWMEIRCNIDSKMLSPNSTYAAFMVFKIAEGFYGLDTPLQEGT 88

Query: 118 ILHWKNKKKEILYFRSPRPWNLHDTHHAPKKREDGWMEV 2
           +     + +  + F S  P     +   P+KR DGWMEV
Sbjct: 89  VSLGGRESRREVAFTSIDPRPPQGSAAYPQKRADGWMEV 127


>ref|NP_973399.1| F-box protein [Arabidopsis thaliana]
           gi|122213648|sp|Q3E6P4.1|FB95_ARATH RecName: Full=F-box
           protein At2g02240 gi|330250466|gb|AEC05560.1| F-box
           protein [Arabidopsis thaliana]
          Length = 320

 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 50/166 (30%), Positives = 77/166 (46%), Gaps = 9/166 (5%)
 Frame = -1

Query: 475 LERSKYYVPDDSKEEPYVLISECIPHDEGAK-FSPSKVDEKKCHIYVLPAGMVLYDFSNE 299
           + RS+ +     KE  + L    +  ++G K F   K   K+C +       + +  S E
Sbjct: 113 VSRSRVFA--SKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPE 170

Query: 298 KF----FRQSRFQQGIEILSQQVFRIKCKIKSQMLLSHTNYVCYLVFKLSEKCCGL-HCP 134
            +      +SRF +  E+L    F I+ K  +++L   T Y  Y+VFK  ++C GL H P
Sbjct: 171 YWQWISIPESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAYIVFKTKDRCPGLGHLP 230

Query: 133 VKVRDILHWKNKKKEILYFRSPRP-WNLHDTHHA--PKKREDGWME 5
           V+V   L  +   K  +YF  PR      +T     P +REDGWME
Sbjct: 231 VEVGLGLVGQESSKRFIYFIGPRDRRGRRETRDVTKPDQREDGWME 276


>ref|XP_002892485.1| phloem protein 2-B15 [Arabidopsis lyrata subsp. lyrata]
           gi|297338327|gb|EFH68744.1| phloem protein 2-B15
           [Arabidopsis lyrata subsp. lyrata]
          Length = 289

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 28/175 (16%)
 Frame = -1

Query: 442 SKEEPYVLISECIPHDEGAK-FSPSKVDEKKCHIYVLPAGMVLYDFSNEKFF------RQ 284
           SK+E Y  + E I  D G K F   K+  K    Y+L A  +   +S+++ +        
Sbjct: 64  SKKELYRYLCESILIDNGRKIFKIEKLSGKIS--YILSARDLSITWSDQRHYWSWSPRSD 121

Query: 283 SRFQQGIEILSQQVFRIKCKIKSQMLLSHTNYVCYLVFKLSEKCCGL------------H 140
           SRF +G+E++      I  KI++ +L  +TNY  YL+ K++ +  GL            +
Sbjct: 122 SRFSEGVELIMTDWLEIIGKIQTGVLSPNTNYGAYLIMKVTSRAYGLDLVPAETSIKVGN 181

Query: 139 CPVKVR----DILHWKNKKKEILYFRSPRPWNLHD-----THHAPKKREDGWMEV 2
           C  K+R      L  K ++ E +++R        D         P+ R+DGWME+
Sbjct: 182 CEKKIRSTYLSCLDNKKQQMERMFYRQREQRMAMDKVVGSNRREPELRDDGWMEI 236


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