BLASTX nr result

ID: Atractylodes22_contig00008097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00008097
         (1842 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270595.2| PREDICTED: DNA primase small subunit-like [V...   486   e-140
emb|CBI34473.3| unnamed protein product [Vitis vinifera]              486   e-137
ref|XP_002515859.1| DNA primase, putative [Ricinus communis] gi|...   464   e-132
ref|XP_003545171.1| PREDICTED: LOW QUALITY PROTEIN: DNA primase ...   449   e-123
ref|XP_004141619.1| PREDICTED: DNA primase small subunit-like [C...   440   e-123

>ref|XP_002270595.2| PREDICTED: DNA primase small subunit-like [Vitis vinifera]
          Length = 457

 Score =  486 bits (1250), Expect(2) = e-140
 Identities = 229/279 (82%), Positives = 255/279 (91%), Gaps = 4/279 (1%)
 Frame = -2

Query: 1328 GRHPACDKSYFGRREFSFTLDNDIYLRYQSFKSASELENGIKDKCPFKIDIGPVYSVDPA 1149
            G+HPACD+SY GRREFSFTL +DIYLR+QSF S  E+EN IK+KCPFKIDIGPVYSVDP 
Sbjct: 61   GKHPACDQSYIGRREFSFTLADDIYLRFQSFNSVHEMENSIKEKCPFKIDIGPVYSVDPT 120

Query: 1148 KRLAYVQSGDNIFTPVERELVFDIDISDYDDARYCCSGADVCLDCWPLMTIAIKVIDTAL 969
            KR AY QSGDN+FTPVERELVFDIDI+DYDD RYCCSGADVCLDCWPLMT+AIKVIDTAL
Sbjct: 121  KRHAYAQSGDNVFTPVERELVFDIDITDYDDVRYCCSGADVCLDCWPLMTVAIKVIDTAL 180

Query: 968  RDDFGFNHVLWVYSGRRGVHCWVCDGKARRFNNEQRAAVADYFRMYKGNSNSKSKVSLVG 789
            RDDFGFNH+LWVYSGRRGVHCWVCDG+ARR +NEQRAA+ADYFR+YKGN NS+ KVSLVG
Sbjct: 181  RDDFGFNHILWVYSGRRGVHCWVCDGRARRLSNEQRAAIADYFRVYKGNENSQKKVSLVG 240

Query: 788  PALHPFLVRSYGDVLKDFFEEKLLPSQQLLS-DERYEKILEMIPDESITAELRGKW--NR 618
            PALHPFL RSY +VLKDFFEEKLLP Q+L S +ERYEKIL++IPDESIT+ELRGKW  NR
Sbjct: 241  PALHPFLARSYTEVLKDFFEEKLLPGQKLFSTEERYEKILKIIPDESITSELRGKWQENR 300

Query: 617  RSS-SGKDVNVVRWEQLKHLLQSGKQKAPGIRRCVEEIV 504
            RSS S +D+N +RWEQLKH+LQSGKQKA G+RRCVEEIV
Sbjct: 301  RSSISKEDINAIRWEQLKHMLQSGKQKAQGLRRCVEEIV 339



 Score = 42.7 bits (99), Expect(2) = e-140
 Identities = 22/40 (55%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
 Frame = -1

Query: 1554 EEAHNGRDDMLIDDPEPQNAQV---DAFPDGFNPNYLKVY 1444
            EE  +GRD M ID  EP+  +    +A PDGFN NYLKVY
Sbjct: 2    EEVDSGRDAMEIDGCEPEGQEKMRENAVPDGFNANYLKVY 41



 Score = 73.2 bits (178), Expect(2) = 1e-18
 Identities = 31/40 (77%), Positives = 36/40 (90%)
 Frame = -3

Query: 367 CVHPKTGRVCVPINPEICDEFDPTNVPTLSKLLGEINTAG 248
           CVHPKTGRVCVPI+P+ C+EFDPT+VPTLSKLL E+N  G
Sbjct: 364 CVHPKTGRVCVPIDPKSCEEFDPTSVPTLSKLLEELNMGG 403



 Score = 47.8 bits (112), Expect(2) = 1e-18
 Identities = 23/46 (50%), Positives = 28/46 (60%)
 Frame = -2

Query: 152 WDGTSMGKYIRYFRESFLQPLLKSCXXXXXXXXXXXXXXXKNSLSW 15
           W+ TS+GK +++FR SFLQPLLKSC               KNSLSW
Sbjct: 412 WERTSLGKSVKFFRLSFLQPLLKSCKEEIESAYNAKLQLSKNSLSW 457


>emb|CBI34473.3| unnamed protein product [Vitis vinifera]
          Length = 447

 Score =  486 bits (1250), Expect(2) = e-137
 Identities = 229/279 (82%), Positives = 255/279 (91%), Gaps = 4/279 (1%)
 Frame = -2

Query: 1328 GRHPACDKSYFGRREFSFTLDNDIYLRYQSFKSASELENGIKDKCPFKIDIGPVYSVDPA 1149
            G+HPACD+SY GRREFSFTL +DIYLR+QSF S  E+EN IK+KCPFKIDIGPVYSVDP 
Sbjct: 51   GKHPACDQSYIGRREFSFTLADDIYLRFQSFNSVHEMENSIKEKCPFKIDIGPVYSVDPT 110

Query: 1148 KRLAYVQSGDNIFTPVERELVFDIDISDYDDARYCCSGADVCLDCWPLMTIAIKVIDTAL 969
            KR AY QSGDN+FTPVERELVFDIDI+DYDD RYCCSGADVCLDCWPLMT+AIKVIDTAL
Sbjct: 111  KRHAYAQSGDNVFTPVERELVFDIDITDYDDVRYCCSGADVCLDCWPLMTVAIKVIDTAL 170

Query: 968  RDDFGFNHVLWVYSGRRGVHCWVCDGKARRFNNEQRAAVADYFRMYKGNSNSKSKVSLVG 789
            RDDFGFNH+LWVYSGRRGVHCWVCDG+ARR +NEQRAA+ADYFR+YKGN NS+ KVSLVG
Sbjct: 171  RDDFGFNHILWVYSGRRGVHCWVCDGRARRLSNEQRAAIADYFRVYKGNENSQKKVSLVG 230

Query: 788  PALHPFLVRSYGDVLKDFFEEKLLPSQQLLS-DERYEKILEMIPDESITAELRGKW--NR 618
            PALHPFL RSY +VLKDFFEEKLLP Q+L S +ERYEKIL++IPDESIT+ELRGKW  NR
Sbjct: 231  PALHPFLARSYTEVLKDFFEEKLLPGQKLFSTEERYEKILKIIPDESITSELRGKWQENR 290

Query: 617  RSS-SGKDVNVVRWEQLKHLLQSGKQKAPGIRRCVEEIV 504
            RSS S +D+N +RWEQLKH+LQSGKQKA G+RRCVEEIV
Sbjct: 291  RSSISKEDINAIRWEQLKHMLQSGKQKAQGLRRCVEEIV 329



 Score = 33.1 bits (74), Expect(2) = e-137
 Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = -1

Query: 1527 MLIDDPEPQNAQV---DAFPDGFNPNYLKVY 1444
            M ID  EP+  +    +A PDGFN NYLKVY
Sbjct: 1    MEIDGCEPEGQEKMRENAVPDGFNANYLKVY 31



 Score = 73.2 bits (178), Expect(2) = 1e-18
 Identities = 31/40 (77%), Positives = 36/40 (90%)
 Frame = -3

Query: 367 CVHPKTGRVCVPINPEICDEFDPTNVPTLSKLLGEINTAG 248
           CVHPKTGRVCVPI+P+ C+EFDPT+VPTLSKLL E+N  G
Sbjct: 354 CVHPKTGRVCVPIDPKSCEEFDPTSVPTLSKLLEELNMGG 393



 Score = 47.8 bits (112), Expect(2) = 1e-18
 Identities = 23/46 (50%), Positives = 28/46 (60%)
 Frame = -2

Query: 152 WDGTSMGKYIRYFRESFLQPLLKSCXXXXXXXXXXXXXXXKNSLSW 15
           W+ TS+GK +++FR SFLQPLLKSC               KNSLSW
Sbjct: 402 WERTSLGKSVKFFRLSFLQPLLKSCKEEIESAYNAKLQLSKNSLSW 447


>ref|XP_002515859.1| DNA primase, putative [Ricinus communis] gi|223545014|gb|EEF46528.1|
            DNA primase, putative [Ricinus communis]
          Length = 515

 Score =  464 bits (1194), Expect(2) = e-132
 Identities = 220/279 (78%), Positives = 247/279 (88%), Gaps = 4/279 (1%)
 Frame = -2

Query: 1328 GRHPACDKSYFGRREFSFTLDNDIYLRYQSFKSASELENGIKDKCPFKIDIGPVYSVDPA 1149
            G+HPACDKSYFGRREFSFTLDNDIYLR+QSF + S+L+  IKDKCPFKIDIGPVY+VDPA
Sbjct: 50   GKHPACDKSYFGRREFSFTLDNDIYLRFQSFNNESQLKTSIKDKCPFKIDIGPVYTVDPA 109

Query: 1148 KRLAYVQSGDNIFTPVERELVFDIDISDYDDARYCCSGADVCLDCWPLMTIAIKVIDTAL 969
            KR AY QSGDN+FTPVEREL+FDID+SDYD+ RYCCSGADVCLDCWPLMTIAIKVI++AL
Sbjct: 110  KRHAYSQSGDNVFTPVERELIFDIDMSDYDNVRYCCSGADVCLDCWPLMTIAIKVINSAL 169

Query: 968  RDDFGFNHVLWVYSGRRGVHCWVCDGKARRFNNEQRAAVADYFRMYKGNSNSKSKVSLVG 789
            RDDFGFNH+LWVYSGRRGVHCWVCDGKARR  NEQRAA+ DY R+YKGN NS   VSL G
Sbjct: 170  RDDFGFNHILWVYSGRRGVHCWVCDGKARRLTNEQRAAIVDYLRVYKGNENSNKMVSLTG 229

Query: 788  PALHPFLVRSYGDVLKDFFEEKLLPSQQLLS-DERYEKILEMIPDESITAELRGKW---N 621
            P LHPFLVRSY +VLKDFFE KLL SQ++ S +ERYEKILEMIPDES+T+ELRGKW    
Sbjct: 230  P-LHPFLVRSYAEVLKDFFETKLLSSQEIFSTEERYEKILEMIPDESVTSELRGKWQNTK 288

Query: 620  RRSSSGKDVNVVRWEQLKHLLQSGKQKAPGIRRCVEEIV 504
            + SSS + VN+VRWEQLK  LQSG +KAPG+R+CVEEIV
Sbjct: 289  QTSSSKEGVNLVRWEQLKRTLQSGTKKAPGLRKCVEEIV 327



 Score = 37.0 bits (84), Expect(2) = e-132
 Identities = 19/36 (52%), Positives = 22/36 (61%)
 Frame = -1

Query: 1551 EAHNGRDDMLIDDPEPQNAQVDAFPDGFNPNYLKVY 1444
            E  NGRDDMLID         +A  + FNPNYLK+Y
Sbjct: 3    EVDNGRDDMLID--------ANAVSNEFNPNYLKLY 30



 Score = 71.2 bits (173), Expect(2) = 8e-16
 Identities = 30/40 (75%), Positives = 35/40 (87%)
 Frame = -3

Query: 367 CVHPKTGRVCVPINPEICDEFDPTNVPTLSKLLGEINTAG 248
           C+HPKTGRVCVPI+P+ CDEFDPT VPTLS+LL E+N  G
Sbjct: 352 CIHPKTGRVCVPIDPKHCDEFDPTAVPTLSQLLKELNMGG 391



 Score = 40.4 bits (93), Expect(2) = 8e-16
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = -2

Query: 149 DGTSMGKYIRYFRESFLQPLLKSC 78
           D TS+GK I +FR SFLQPLLKSC
Sbjct: 401 DRTSLGKSISFFRSSFLQPLLKSC 424


>ref|XP_003545171.1| PREDICTED: LOW QUALITY PROTEIN: DNA primase small subunit-like
            [Glycine max]
          Length = 435

 Score =  449 bits (1154), Expect = e-123
 Identities = 216/280 (77%), Positives = 241/280 (86%), Gaps = 5/280 (1%)
 Frame = -2

Query: 1328 GRHPACDKSYFGRREFSFTLDNDIYLRYQSFKSASELENGIKDKCPFKIDIGPVYSVDPA 1149
            G+HP CD+SY GRREFSFTL+NDIYLR+QSF +A ELEN IK+KCP KIDIGPVY+VDPA
Sbjct: 37   GKHPGCDQSYIGRREFSFTLENDIYLRFQSFHNAHELENSIKEKCPVKIDIGPVYTVDPA 96

Query: 1148 KRLAYVQSGDN-IFTPVERELVFDIDISDYDDARYCCSGADVCLDCWPLMTIAIKVIDTA 972
            KR AY QSGDN +F PVEREL+FDID+SDYDD RYCCSGADVCL CWPLMT AIKVIDTA
Sbjct: 97   KRNAYAQSGDNNVFAPVERELIFDIDMSDYDDVRYCCSGADVCLVCWPLMTTAIKVIDTA 156

Query: 971  LRDDFGFNHVLWVYSGRRGVHCWVCDGKARRFNNEQRAAVADYFRMYKGNSNSKSKVSLV 792
            LRDDFGF H+LWVYSGRRGVHCWVCDGKARR  NEQR A+ADYFR+YKGN NS  KVSL+
Sbjct: 157  LRDDFGFKHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSHKKVSLM 216

Query: 791  GPALHPFLVRSYGDVLKDFFEEKLLPSQQLL-SDERYEKILEMIPDESITAELRGKW--N 621
            G ALHPFL  SY +VLKD+FE+ LL  Q LL ++ERYEKIL MIPDESI +ELRG+W  +
Sbjct: 217  GAALHPFLATSYTNVLKDYFEKNLLTGQNLLATEERYEKILGMIPDESIASELRGRWQDS 276

Query: 620  RRSSSGK-DVNVVRWEQLKHLLQSGKQKAPGIRRCVEEIV 504
            RRSSS K D+NVVRWEQ K LLQSGK KA G+RRC+EEIV
Sbjct: 277  RRSSSAKEDINVVRWEQCKQLLQSGKHKAQGLRRCIEEIV 316



 Score = 69.3 bits (168), Expect(2) = 7e-14
 Identities = 29/40 (72%), Positives = 35/40 (87%)
 Frame = -3

Query: 367 CVHPKTGRVCVPINPEICDEFDPTNVPTLSKLLGEINTAG 248
           CVHPKTGRVCVPI+P+ C+EFDPT VPTLS+L+ E+N  G
Sbjct: 341 CVHPKTGRVCVPIDPKRCEEFDPTTVPTLSQLIEELNYEG 380



 Score = 35.8 bits (81), Expect(2) = 7e-14
 Identities = 19/43 (44%), Positives = 23/43 (53%)
 Frame = -2

Query: 143 TSMGKYIRYFRESFLQPLLKSCXXXXXXXXXXXXXXXKNSLSW 15
           T++G  I  FR SFLQPLLK+C               KNSL+W
Sbjct: 393 TTLGNAITLFRLSFLQPLLKACKEEIENSYYLKLQQSKNSLAW 435


>ref|XP_004141619.1| PREDICTED: DNA primase small subunit-like [Cucumis sativus]
            gi|449517297|ref|XP_004165682.1| PREDICTED: DNA primase
            small subunit-like [Cucumis sativus]
          Length = 450

 Score =  440 bits (1131), Expect(2) = e-123
 Identities = 210/277 (75%), Positives = 240/277 (86%), Gaps = 2/277 (0%)
 Frame = -2

Query: 1328 GRHPACDKSYFGRREFSFTLDNDIYLRYQSFKSASELENGIKDKCPFKIDIGPVYSVDPA 1149
            G+HP  D+SYFGRREFSFTLDNDIYLR+QSF + SE+E  IK+KCPFKIDIGPVYSVDPA
Sbjct: 58   GKHPGSDQSYFGRREFSFTLDNDIYLRFQSFNNLSEMEISIKEKCPFKIDIGPVYSVDPA 117

Query: 1148 KRLAYVQSGDNIFTPVERELVFDIDISDYDDARYCCSGADVCLDCWPLMTIAIKVIDTAL 969
            KR AY    DN+FTPVERELVFDID++DYDD RYCCSGADVCLDCWPLMT AIKVI T L
Sbjct: 118  KRHAYAD--DNVFTPVERELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVIHTTL 175

Query: 968  RDDFGFNHVLWVYSGRRGVHCWVCDGKARRFNNEQRAAVADYFRMYKGNSNSKSKVSLVG 789
            RDDFGFNH+LWV+SGRRGVHCWVCDGKARR +NEQRAA+A+YF +Y+GN NS+ K+SL G
Sbjct: 176  RDDFGFNHILWVFSGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTG 235

Query: 788  PALHPFLVRSYGDVLKDFFEEKLLPSQQLLS-DERYEKILEMIPDESITAELRGKW-NRR 615
            P LHPFLVRSY +VLKD FE +LL SQ++ S +ERYEKIL+MIPDESIT++LRG+W + R
Sbjct: 236  PVLHPFLVRSYTEVLKDSFESQLLCSQKIFSTEERYEKILDMIPDESITSDLRGRWQDNR 295

Query: 614  SSSGKDVNVVRWEQLKHLLQSGKQKAPGIRRCVEEIV 504
             SS  DVN +RWEQLK LLQSGK KA G+RR VEEIV
Sbjct: 296  RSSKNDVNSLRWEQLKSLLQSGKHKAQGMRRHVEEIV 332



 Score = 31.6 bits (70), Expect(2) = e-123
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -1

Query: 1563 MTKEEAHNGRDDMLIDDPE--PQNAQVDAFPDGFNPNYLKVY 1444
            M      NG  DM+ID  E  P+N       DGF+ NYLK+Y
Sbjct: 1    MVTAAVENGGSDMVIDGNEQKPKNT----VSDGFDANYLKIY 38



 Score = 70.9 bits (172), Expect(2) = 3e-18
 Identities = 29/39 (74%), Positives = 35/39 (89%)
 Frame = -3

Query: 367 CVHPKTGRVCVPINPEICDEFDPTNVPTLSKLLGEINTA 251
           CVHPKTGR+CVPI+PE CDEFDPT VPT+++LL E+N A
Sbjct: 357 CVHPKTGRICVPIDPEHCDEFDPTTVPTVAQLLEELNAA 395



 Score = 49.3 bits (116), Expect(2) = 3e-18
 Identities = 24/46 (52%), Positives = 28/46 (60%)
 Frame = -2

Query: 152 WDGTSMGKYIRYFRESFLQPLLKSCXXXXXXXXXXXXXXXKNSLSW 15
           WD TS+G+ IR+FR +FLQPLLKSC               KNSLSW
Sbjct: 405 WDRTSLGESIRFFRSAFLQPLLKSCKEEIESSYNAKVQQSKNSLSW 450


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