BLASTX nr result

ID: Atractylodes22_contig00008059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00008059
         (814 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM53298.1| putative proteasome regulatory subunit S3 [Arabid...    93   6e-17
ref|NP_173447.1| 26S proteasome regulatory subunit N3 [Arabidops...    93   6e-17
ref|XP_002893093.1| EMB2719 [Arabidopsis lyrata subsp. lyrata] g...    93   6e-17
gb|AAL09760.1| At1g20200/T20H2_4 [Arabidopsis thaliana]                93   6e-17
gb|AAF79894.1|AC022472_3 Contains similarity to 26s proteasome r...    93   6e-17

>gb|AAM53298.1| putative proteasome regulatory subunit S3 [Arabidopsis thaliana]
          Length = 488

 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 43/51 (84%), Positives = 47/51 (92%)
 Frame = -3

Query: 191 KFCCYFFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWV*LL 39
           +FC Y FYLGKIRTIQLEYTDAKESLLQAARKAP+AALGFR+QCNKW  L+
Sbjct: 238 QFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRIQCNKWAILV 288


>ref|NP_173447.1| 26S proteasome regulatory subunit N3 [Arabidopsis thaliana]
           gi|30316389|sp|Q9LNU4.3|PSD31_ARATH RecName:
           Full=Probable 26S proteasome non-ATPase regulatory
           subunit 3a; Short=26S proteasome subunit S3-a; AltName:
           Full=26S proteasome regulatory subunit RPN3a; AltName:
           Full=Protein EMBRYO DEFECTIVE 2719
           gi|32700016|gb|AAP86658.1| 26S proteasome subunit RPN3a
           [Arabidopsis thaliana] gi|332191829|gb|AEE29950.1| 26S
           proteasome regulatory subunit N3 [Arabidopsis thaliana]
          Length = 488

 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 43/51 (84%), Positives = 47/51 (92%)
 Frame = -3

Query: 191 KFCCYFFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWV*LL 39
           +FC Y FYLGKIRTIQLEYTDAKESLLQAARKAP+AALGFR+QCNKW  L+
Sbjct: 238 QFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRIQCNKWAILV 288


>ref|XP_002893093.1| EMB2719 [Arabidopsis lyrata subsp. lyrata]
           gi|297338935|gb|EFH69352.1| EMB2719 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 488

 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 43/51 (84%), Positives = 47/51 (92%)
 Frame = -3

Query: 191 KFCCYFFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWV*LL 39
           +FC Y FYLGKIRTIQLEYTDAKESLLQAARKAP+AALGFR+QCNKW  L+
Sbjct: 238 QFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRIQCNKWAILV 288


>gb|AAL09760.1| At1g20200/T20H2_4 [Arabidopsis thaliana]
          Length = 378

 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 43/51 (84%), Positives = 47/51 (92%)
 Frame = -3

Query: 191 KFCCYFFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWV*LL 39
           +FC Y FYLGKIRTIQLEYTDAKESLLQAARKAP+AALGFR+QCNKW  L+
Sbjct: 238 QFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRIQCNKWAILV 288


>gb|AAF79894.1|AC022472_3 Contains similarity to 26s proteasome regulatory subunit S3 from
           Nicotiana tabacum gi|3914467 and contains a PCI PF|01399
           domain. ESTs gb|AV527569, gb|T75824, gb|T88578,
           gb|F15139, gb|AV520993, gb|AV440056, gb|AI099602,
           gb|F15138 come from this gene [Arabidopsis thaliana]
          Length = 519

 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 43/51 (84%), Positives = 47/51 (92%)
 Frame = -3

Query: 191 KFCCYFFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWV*LL 39
           +FC Y FYLGKIRTIQLEYTDAKESLLQAARKAP+AALGFR+QCNKW  L+
Sbjct: 269 QFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRIQCNKWAILV 319


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