BLASTX nr result

ID: Atractylodes22_contig00007978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00007978
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270335.1| PREDICTED: protein VERNALIZATION INSENSITIVE...    83   2e-14
gb|AFD98847.1| vernalization insensitive 3 [Solanum lycopersicum]      79   3e-13
ref|XP_003549399.1| PREDICTED: protein VERNALIZATION INSENSITIVE...    79   4e-13
ref|XP_003541436.1| PREDICTED: protein VERNALIZATION INSENSITIVE...    79   4e-13
ref|XP_004146321.1| PREDICTED: protein VERNALIZATION INSENSITIVE...    79   5e-13

>ref|XP_002270335.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Vitis
           vinifera]
          Length = 738

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 56/125 (44%), Positives = 65/125 (52%), Gaps = 14/125 (11%)
 Frame = +2

Query: 197 KIIKNFSRNDE-----NPGKEFDPSVPRIAAKLPITPCKTESIKDAILARKTRLQASQKN 361
           +II+  S + E       G E  P V    A LPITPCK E  KD  L R  R + S  +
Sbjct: 557 QIIEEMSTDKEANTPVRTGMECVPFVGSSEAGLPITPCKLEIFKDG-LGRNGRPKPSTMD 615

Query: 362 LDNGCXXXXXXXXXXXDGSSSKKRSGEEAD---------DRDFGYYVKVIRWLECEGHMD 514
           LD+G             GSSSKKRS E  D         DRDF YYVKVIRWLECEGH++
Sbjct: 616 LDDGSGKGDEPQA----GSSSKKRSAERQDEECAANGPSDRDFEYYVKVIRWLECEGHVE 671

Query: 515 TGFRK 529
             FR+
Sbjct: 672 KNFRQ 676


>gb|AFD98847.1| vernalization insensitive 3 [Solanum lycopersicum]
          Length = 739

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 47/102 (46%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
 Frame = +2

Query: 242 EFDPSVPRIAAKLPITPCKTESIKDAILARKTRLQASQKNLDNGCXXXXXXXXXXXDGSS 421
           EF P V  + A LPITPCK E++K + L RK + +   K+LDNG             G S
Sbjct: 581 EFAPFVGSVDAGLPITPCKMENVKGS-LGRKGKSEHCSKDLDNGSGKEDGPQV----GCS 635

Query: 422 SKKRSGEEAD------DRDFGYYVKVIRWLECEGHMDTGFRK 529
           SKKR GE  +      D+DF YYVKV+RWLEC  H+D  FR+
Sbjct: 636 SKKRVGEWHEECAGTGDKDFEYYVKVVRWLECGEHIDKTFRQ 677


>ref|XP_003549399.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max]
          Length = 737

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 47/107 (43%), Positives = 60/107 (56%), Gaps = 9/107 (8%)
 Frame = +2

Query: 236 GKEFDPSVPRIAAKLPITPCKTESIKDAILARKTRLQASQKNLDNGCXXXXXXXXXXXDG 415
           G+E  P V      LP TPCK E++KD    +  R ++S K+ +N             DG
Sbjct: 574 GRECVPLVGSSKGGLPNTPCKLETLKDGP-GKNKRSKSSGKDQEN----VSGKREGPQDG 628

Query: 416 SSSKKRSGEEAD---------DRDFGYYVKVIRWLECEGHMDTGFRK 529
           S+SKKRSGE  +         DRDF YYVKVIRWLECEGH++  FR+
Sbjct: 629 STSKKRSGERQEEGRVANGFSDRDFEYYVKVIRWLECEGHIEKNFRQ 675


>ref|XP_003541436.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max]
          Length = 736

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 47/107 (43%), Positives = 60/107 (56%), Gaps = 9/107 (8%)
 Frame = +2

Query: 236 GKEFDPSVPRIAAKLPITPCKTESIKDAILARKTRLQASQKNLDNGCXXXXXXXXXXXDG 415
           G+E  P V      LP TPCK E++KD    +  R ++S K+ +N             DG
Sbjct: 573 GRECVPLVGSSEGGLPNTPCKLETLKDGP-GKNKRSKSSGKDQEN----VSGKREGPQDG 627

Query: 416 SSSKKRSGEEAD---------DRDFGYYVKVIRWLECEGHMDTGFRK 529
           S+SKKRSGE  +         DRDF YYVKVIRWLECEGH++  FR+
Sbjct: 628 STSKKRSGERQEEGRVANGFSDRDFEYYVKVIRWLECEGHIEKNFRQ 674


>ref|XP_004146321.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Cucumis
           sativus] gi|449502927|ref|XP_004161782.1| PREDICTED:
           protein VERNALIZATION INSENSITIVE 3-like [Cucumis
           sativus]
          Length = 737

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 45/107 (42%), Positives = 61/107 (57%), Gaps = 9/107 (8%)
 Frame = +2

Query: 236 GKEFDPSVPRIAAKLPITPCKTESIKDAILARKTRLQASQKNLDNGCXXXXXXXXXXXDG 415
           G +  P V    A LP+TPCK E +KD +L R  R ++S K+ D+             +G
Sbjct: 574 GTKSTPFVSSSEAGLPVTPCKMEILKD-VLGRSGRSKSSTKDRDD----KGSGGEELRNG 628

Query: 416 SSSKKRSGEEAD---------DRDFGYYVKVIRWLECEGHMDTGFRK 529
           S+SKKR+ E  D         D+DF YYVK+IRWLECEGH++  FR+
Sbjct: 629 STSKKRNAERQDVDCTANGISDKDFEYYVKLIRWLECEGHIEKNFRQ 675


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