BLASTX nr result

ID: Atractylodes22_contig00007946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00007946
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containi...    97   2e-18
ref|XP_002325369.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containi...    95   5e-18
ref|XP_002522032.1| pentatricopeptide repeat-containing protein,...    94   1e-17
emb|CAN80394.1| hypothetical protein VITISV_001596 [Vitis vinifera]    94   1e-17

>ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial [Vitis vinifera]
           gi|296085168|emb|CBI28663.3| unnamed protein product
           [Vitis vinifera]
          Length = 454

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 43/56 (76%), Positives = 53/56 (94%)
 Frame = +3

Query: 3   RGGRYVEAANYLMEMTEFKLSPMSRHFDMVTDGLKNCGKHDMAKRIEQLEISLRGM 170
           RGGR+V+AANYL+EMTE  L+P+SR FDMVTDGLKNCGKHD+A++IEQLE+SLRG+
Sbjct: 399 RGGRFVDAANYLVEMTELNLTPISRCFDMVTDGLKNCGKHDLARKIEQLEVSLRGV 454


>ref|XP_002325369.1| predicted protein [Populus trichocarpa] gi|222862244|gb|EEE99750.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/55 (81%), Positives = 51/55 (92%)
 Frame = +3

Query: 3   RGGRYVEAANYLMEMTEFKLSPMSRHFDMVTDGLKNCGKHDMAKRIEQLEISLRG 167
           RGG++VEAANYL+EMTE  L P+SR FDMVTDGLKNCGKHD+AKRIEQLE+SLRG
Sbjct: 368 RGGKHVEAANYLVEMTEIGLVPISRCFDMVTDGLKNCGKHDLAKRIEQLEVSLRG 422


>ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial-like [Cucumis sativus]
           gi|449518358|ref|XP_004166209.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial-like [Cucumis sativus]
          Length = 455

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 43/56 (76%), Positives = 51/56 (91%)
 Frame = +3

Query: 3   RGGRYVEAANYLMEMTEFKLSPMSRHFDMVTDGLKNCGKHDMAKRIEQLEISLRGM 170
           RGGR+V+AANYLMEM E  L P+SR FDMVTDGLKNCGKHD+AK+IEQLE+S+RG+
Sbjct: 400 RGGRFVDAANYLMEMAELGLPPISRCFDMVTDGLKNCGKHDLAKKIEQLEVSIRGI 455


>ref|XP_002522032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538836|gb|EEF40436.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 451

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 43/53 (81%), Positives = 50/53 (94%)
 Frame = +3

Query: 3   RGGRYVEAANYLMEMTEFKLSPMSRHFDMVTDGLKNCGKHDMAKRIEQLEISL 161
           RGG+YVEAANYL+EMTE  L+P+SR FDMVTDGLKNCGKHD+AKRIEQLE+S+
Sbjct: 396 RGGKYVEAANYLVEMTEMGLTPISRCFDMVTDGLKNCGKHDLAKRIEQLEVSV 448


>emb|CAN80394.1| hypothetical protein VITISV_001596 [Vitis vinifera]
          Length = 356

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 42/55 (76%), Positives = 51/55 (92%)
 Frame = +3

Query: 3   RGGRYVEAANYLMEMTEFKLSPMSRHFDMVTDGLKNCGKHDMAKRIEQLEISLRG 167
           RGGR+V+AANYL+EMTE  L+P+SR FDMVTDGLKNCGKHD+A++IEQLE+SL G
Sbjct: 299 RGGRFVDAANYLVEMTELNLTPISRCFDMVTDGLKNCGKHDLARKIEQLEVSLSG 353


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