BLASTX nr result

ID: Atractylodes22_contig00007917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00007917
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P30155.1|RK27_TOBAC RecName: Full=50S ribosomal protein L27, ...   224   1e-56
ref|XP_002509506.1| ribosomal protein L27, putative [Ricinus com...   218   1e-54
gb|ACQ90306.1| auxin-repressed protein 1 [Brassica rapa subsp. p...   214   2e-53
gb|ABK96514.1| unknown [Populus trichocarpa x Populus deltoides]      213   3e-53
ref|NP_198911.1| 50S ribosomal protein L27 [Arabidopsis thaliana...   212   4e-53

>sp|P30155.1|RK27_TOBAC RecName: Full=50S ribosomal protein L27, chloroplastic; AltName:
           Full=CL27; Flags: Precursor gi|170306|gb|AAA34104.1|
           ribosomal protein L27 [Nicotiana tabacum]
           gi|170326|gb|AAA34115.1| ribosomal protein L27
           [Nicotiana tabacum]
          Length = 179

 Score =  224 bits (570), Expect = 1e-56
 Identities = 111/152 (73%), Positives = 125/152 (82%)
 Frame = +1

Query: 112 ALSFNLVGAXXXXXXXXXXXXXXXXXXXXXXPTARKSSISLPLRTPLTIQNAHKKGAGST 291
           A+SF+LVGA                      P A K S+S PL++PLTI++AHKKGAGST
Sbjct: 2   AVSFSLVGAFKGLSLASSSSFLKGDFGAAF-PVAPKFSVSFPLKSPLTIESAHKKGAGST 60

Query: 292 KNGRDSPGQRLGVKIYGNQLAKPGAIIIRQRGTKVHPGKNVGIGKDHTIFSLIDGLVKFE 471
           KNGRDSPGQRLGVKI+G+Q+AKPG+II+RQRGTK HPGKNVG+GKDHTIFSLIDGLVKFE
Sbjct: 61  KNGRDSPGQRLGVKIFGDQVAKPGSIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFE 120

Query: 472 KFGPDRKKVSVYPREVQPENPNSYRNRKRESF 567
           KFGPDRKK+SVYPREVQPENPNSYRNRKRESF
Sbjct: 121 KFGPDRKKISVYPREVQPENPNSYRNRKRESF 152


>ref|XP_002509506.1| ribosomal protein L27, putative [Ricinus communis]
           gi|223549405|gb|EEF50893.1| ribosomal protein L27,
           putative [Ricinus communis]
          Length = 195

 Score =  218 bits (554), Expect = 1e-54
 Identities = 119/186 (63%), Positives = 131/186 (70%), Gaps = 2/186 (1%)
 Frame = +1

Query: 97  MAAATALSFNLVGAXXXXXXXXXXXXXXXXXXXXXXPTARKSSISLPLRTP--LTIQNAH 270
           +A A A+SFNL+G                        +  ++ +SLPL+ P  LTI+ AH
Sbjct: 4   IATAGAISFNLIGTFKGLSLSSSSSFFKGDTTLNL--SLSRNCVSLPLKAPFPLTIEMAH 61

Query: 271 KKGAGSTKNGRDSPGQRLGVKIYGNQLAKPGAIIIRQRGTKVHPGKNVGIGKDHTIFSLI 450
           KKGAGSTKNGRDSPGQRLGVKI+GNQ AKPGAII+RQRGTK HPGKNVG+GKDHTIFSLI
Sbjct: 62  KKGAGSTKNGRDSPGQRLGVKIFGNQAAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLI 121

Query: 451 DGLVKFEKFGPDRKKVSVYPREVQPENPNSYRNRKRESFXXXXXXXXXXXXXXXGTAAEP 630
           DGLVKFEKFGPDRKKVSVYPREVQPENPNSYR RKRE F               G  AEP
Sbjct: 122 DGLVKFEKFGPDRKKVSVYPREVQPENPNSYRARKREYF---RLQRERKKARKEGLIAEP 178

Query: 631 LLVLAS 648
            LVLAS
Sbjct: 179 QLVLAS 184


>gb|ACQ90306.1| auxin-repressed protein 1 [Brassica rapa subsp. pekinensis]
          Length = 198

 Score =  214 bits (544), Expect = 2e-53
 Identities = 116/191 (60%), Positives = 131/191 (68%), Gaps = 5/191 (2%)
 Frame = +1

Query: 97  MAAATALSFNLVGAXXXXXXXXXXXXXXXXXXXXXXPTARKSSISLPLR-----TPLTIQ 261
           MA AT++S NL+GA                       +    +++LPL       PLTI+
Sbjct: 1   MAIATSMSLNLIGAFKGLSLSSTSSFLRGDLNLNPKTSF---TVTLPLEKLQAPVPLTIE 57

Query: 262 NAHKKGAGSTKNGRDSPGQRLGVKIYGNQLAKPGAIIIRQRGTKVHPGKNVGIGKDHTIF 441
           +AHKKGAGSTKNGRDSPGQRLGVKIYG+Q+AKPGAII+RQRGTK H GKNVGIGKDHTIF
Sbjct: 58  SAHKKGAGSTKNGRDSPGQRLGVKIYGDQVAKPGAIIVRQRGTKFHAGKNVGIGKDHTIF 117

Query: 442 SLIDGLVKFEKFGPDRKKVSVYPREVQPENPNSYRNRKRESFXXXXXXXXXXXXXXXGTA 621
           SLIDGLVKFEKFGPDRKK+SVYPRE+ PENPNSYR RKRE+F                T 
Sbjct: 118 SLIDGLVKFEKFGPDRKKISVYPREIVPENPNSYRARKREAFRVQREKKKARRENYTYTL 177

Query: 622 AEPLLVLASAT 654
             P LVLASAT
Sbjct: 178 PTPELVLASAT 188


>gb|ABK96514.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 197

 Score =  213 bits (541), Expect = 3e-53
 Identities = 116/188 (61%), Positives = 127/188 (67%), Gaps = 6/188 (3%)
 Frame = +1

Query: 103 AATALSFNLVGAXXXXXXXXXXXXXXXXXXXXXXPTARKSSISLPLRTP------LTIQN 264
           A  A+SFNL+G+                          KSS  LP + P      LTIQ 
Sbjct: 2   ALMAVSFNLIGSFKGLSLSSSSSSSFFKGDAGSLKFGLKSSALLPFKAPVKAPLPLTIQM 61

Query: 265 AHKKGAGSTKNGRDSPGQRLGVKIYGNQLAKPGAIIIRQRGTKVHPGKNVGIGKDHTIFS 444
           AHKKGAGSTKNGRDS G+RLGVKIYG+Q AKPGAII+RQRGTK HPGKNVGIGKDHTIFS
Sbjct: 62  AHKKGAGSTKNGRDSKGKRLGVKIYGDQAAKPGAIIVRQRGTKFHPGKNVGIGKDHTIFS 121

Query: 445 LIDGLVKFEKFGPDRKKVSVYPREVQPENPNSYRNRKRESFXXXXXXXXXXXXXXXGTAA 624
           LIDGLVKFEKFGPDRKK+SVYPRE+QPENPNSYR RKRE+F               G  A
Sbjct: 122 LIDGLVKFEKFGPDRKKISVYPREIQPENPNSYRARKRENF---RLQRERKKARKEGIVA 178

Query: 625 EPLLVLAS 648
           +P LVLAS
Sbjct: 179 QPQLVLAS 186


>ref|NP_198911.1| 50S ribosomal protein L27 [Arabidopsis thaliana]
           gi|20139726|sp|Q9FLN4.1|RK27_ARATH RecName: Full=50S
           ribosomal protein L27, chloroplastic; AltName:
           Full=CL27; Flags: Precursor gi|189096146|pdb|3BBO|X
           Chain X, Homology Model For The Spinach Chloroplast 50s
           Subunit Fitted To 9.4a Cryo-Em Map Of The 70s
           Chlororibosome gi|9759141|dbj|BAB09697.1| 50S ribosomal
           protein L27 [Arabidopsis thaliana]
           gi|15028249|gb|AAK76713.1| putative 50S ribosomal
           protein L27 [Arabidopsis thaliana]
           gi|21436345|gb|AAM51342.1| putative 50S ribosomal
           protein L27 [Arabidopsis thaliana]
           gi|332007235|gb|AED94618.1| 50S ribosomal protein L27
           [Arabidopsis thaliana]
          Length = 198

 Score =  212 bits (540), Expect = 4e-53
 Identities = 115/191 (60%), Positives = 131/191 (68%), Gaps = 5/191 (2%)
 Frame = +1

Query: 97  MAAATALSFNLVGAXXXXXXXXXXXXXXXXXXXXXXPTARKSSISLPLRT-----PLTIQ 261
           MA AT++S NL+GA                       +    +++LPL       PLTI+
Sbjct: 1   MAMATSMSLNLIGAFKGLSLSSTSSFLRGDLSFSPKTSF---TVTLPLENLQAPIPLTIE 57

Query: 262 NAHKKGAGSTKNGRDSPGQRLGVKIYGNQLAKPGAIIIRQRGTKVHPGKNVGIGKDHTIF 441
           +AHKKGAGSTKNGRDSPGQRLGVKIYG+Q+AKPGAII+RQRGTK H GKNVGIGKDHTIF
Sbjct: 58  SAHKKGAGSTKNGRDSPGQRLGVKIYGDQVAKPGAIIVRQRGTKFHAGKNVGIGKDHTIF 117

Query: 442 SLIDGLVKFEKFGPDRKKVSVYPREVQPENPNSYRNRKRESFXXXXXXXXXXXXXXXGTA 621
           SLIDGLVKFEKFGPDRKK+SVYPRE+ PENPNSYR RKRE+F                T 
Sbjct: 118 SLIDGLVKFEKFGPDRKKISVYPREIVPENPNSYRARKRENFRLQREKKKARRENYSYTL 177

Query: 622 AEPLLVLASAT 654
             P LVLASA+
Sbjct: 178 PTPELVLASAS 188


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