BLASTX nr result

ID: Atractylodes22_contig00007906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00007906
         (1042 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270058.1| PREDICTED: RING-H2 finger protein ATL7 [Viti...   233   6e-59
emb|CAN65442.1| hypothetical protein VITISV_011419 [Vitis vinifera]   233   6e-59
ref|XP_002511792.1| ring finger protein, putative [Ricinus commu...   233   8e-59
ref|XP_002301320.1| predicted protein [Populus trichocarpa] gi|2...   214   2e-53
ref|XP_004145049.1| PREDICTED: RING-H2 finger protein ATL54-like...   201   2e-49

>ref|XP_002270058.1| PREDICTED: RING-H2 finger protein ATL7 [Vitis vinifera]
            gi|296089077|emb|CBI38780.3| unnamed protein product
            [Vitis vinifera]
          Length = 201

 Score =  233 bits (594), Expect = 6e-59
 Identities = 117/164 (71%), Positives = 131/164 (79%), Gaps = 16/164 (9%)
 Frame = +1

Query: 562  MNLITTVIGFAMSATFIVFVCARLVCGRFRRYEPRQLFEIDSRIDLEMQEHQVTGLEPVM 741
            MNLITTVIGF MSATFIVFVC RL+CGR R  E RQ+FEIDSRIDLE  EH+++GLEPVM
Sbjct: 5    MNLITTVIGFGMSATFIVFVCTRLICGRLRGVESRQMFEIDSRIDLEQPEHRISGLEPVM 64

Query: 742  VAAIPTMKFEREAFGSMEDAQCTICLGEYQEKEVLRIMPKCGHSFHLSCIDLWLRKQATC 921
            VAAIPTMKF REAF S+EDAQC+ICLGEYQEKEVLRIMPKCGH+FHLSCID+WLRKQ+TC
Sbjct: 65   VAAIPTMKFNREAFSSVEDAQCSICLGEYQEKEVLRIMPKCGHNFHLSCIDVWLRKQSTC 124

Query: 922  PVCRLSI----------------IAAVNSPGISREISIRQWLLP 1005
            PVCRLS+                  +V+SP IS + S  QWLLP
Sbjct: 125  PVCRLSLQDSFETKHVRPEAFDTAQSVDSPEISVDRS-HQWLLP 167


>emb|CAN65442.1| hypothetical protein VITISV_011419 [Vitis vinifera]
          Length = 224

 Score =  233 bits (594), Expect = 6e-59
 Identities = 117/164 (71%), Positives = 131/164 (79%), Gaps = 16/164 (9%)
 Frame = +1

Query: 562  MNLITTVIGFAMSATFIVFVCARLVCGRFRRYEPRQLFEIDSRIDLEMQEHQVTGLEPVM 741
            MNLITTVIGF MSATFIVFVC RL+CGR R  E RQ+FEIDSRIDLE  EH+++GLEPVM
Sbjct: 28   MNLITTVIGFGMSATFIVFVCTRLICGRLRGVESRQMFEIDSRIDLEQPEHRISGLEPVM 87

Query: 742  VAAIPTMKFEREAFGSMEDAQCTICLGEYQEKEVLRIMPKCGHSFHLSCIDLWLRKQATC 921
            VAAIPTMKF REAF S+EDAQC+ICLGEYQEKEVLRIMPKCGH+FHLSCID+WLRKQ+TC
Sbjct: 88   VAAIPTMKFNREAFSSVEDAQCSICLGEYQEKEVLRIMPKCGHNFHLSCIDVWLRKQSTC 147

Query: 922  PVCRLSI----------------IAAVNSPGISREISIRQWLLP 1005
            PVCRLS+                  +V+SP IS + S  QWLLP
Sbjct: 148  PVCRLSLQDSFETKHVRPEAFDTAQSVDSPEISVDRS-HQWLLP 190


>ref|XP_002511792.1| ring finger protein, putative [Ricinus communis]
            gi|223548972|gb|EEF50461.1| ring finger protein, putative
            [Ricinus communis]
          Length = 201

 Score =  233 bits (593), Expect = 8e-59
 Identities = 114/169 (67%), Positives = 133/169 (78%), Gaps = 16/169 (9%)
 Frame = +1

Query: 547  MFGKTMNLITTVIGFAMSATFIVFVCARLVCGRFRRYEPRQLFEIDSRIDLEMQEHQVTG 726
            M G  MNLITTVIGF MSATFIVFVC R++CGR R  E RQ FE++SRIDL+  EHQ++G
Sbjct: 1    MLGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRASESRQTFELESRIDLDQPEHQISG 60

Query: 727  LEPVMVAAIPTMKFEREAFGSMEDAQCTICLGEYQEKEVLRIMPKCGHSFHLSCIDLWLR 906
            LEPVMVAAIPTMKF REAF ++EDAQC+ICLGEYQEKEVLRIMPKCGH+FHLSCID+WLR
Sbjct: 61   LEPVMVAAIPTMKFNREAFTAVEDAQCSICLGEYQEKEVLRIMPKCGHNFHLSCIDVWLR 120

Query: 907  KQATCPVCR----------------LSIIAAVNSPGISREISIRQWLLP 1005
            KQ+TCPVCR                +S++ +++SP  S E S RQWLLP
Sbjct: 121  KQSTCPVCRFPIQDTLEAKHMRQATMSMVRSIDSPETSTEHS-RQWLLP 168


>ref|XP_002301320.1| predicted protein [Populus trichocarpa] gi|222843046|gb|EEE80593.1|
            predicted protein [Populus trichocarpa]
          Length = 197

 Score =  214 bits (546), Expect = 2e-53
 Identities = 105/164 (64%), Positives = 125/164 (76%), Gaps = 16/164 (9%)
 Frame = +1

Query: 562  MNLITTVIGFAMSATFIVFVCARLVCGRFRRYEPRQLFEIDSRIDLEMQEHQVTGLEPVM 741
            MNLITT IGF MSATFIVFVCAR++CGR R  E RQ+FEI+SRID E  EH++ GLEPV+
Sbjct: 1    MNLITTAIGFGMSATFIVFVCARIICGRIRGTESRQMFEIESRIDPEQPEHRIGGLEPVL 60

Query: 742  VAAIPTMKFEREAFGSMEDAQCTICLGEYQEKEVLRIMPKCGHSFHLSCIDLWLRKQATC 921
            +AAIPT++F  E F S EDAQC+ICLGEYQEKEVLRIMP CGH+FHLSCID+WLRKQ+TC
Sbjct: 61   LAAIPTLRFTHEEFSSAEDAQCSICLGEYQEKEVLRIMPGCGHNFHLSCIDVWLRKQSTC 120

Query: 922  PVCR----------------LSIIAAVNSPGISREISIRQWLLP 1005
            PVCR                +S++ +++SP    E S RQWLLP
Sbjct: 121  PVCRFPIQDSFEAKHMRQTAISMVQSIDSPDTRSEQS-RQWLLP 163


>ref|XP_004145049.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus]
           gi|449472490|ref|XP_004153610.1| PREDICTED: RING-H2
           finger protein ATL54-like [Cucumis sativus]
           gi|449516541|ref|XP_004165305.1| PREDICTED: RING-H2
           finger protein ATL54-like [Cucumis sativus]
          Length = 203

 Score =  201 bits (512), Expect = 2e-49
 Identities = 96/134 (71%), Positives = 114/134 (85%), Gaps = 2/134 (1%)
 Frame = +1

Query: 547 MFGKTMNLITTVIGFAMSATFIVFVCARLVCGRFRRYEPRQL-FEIDSRIDLEMQ-EHQV 720
           M G  MNLITTVIGF MSATFIVFVC R++CGR R  +     +EI+SR+DLE Q E + 
Sbjct: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA 60

Query: 721 TGLEPVMVAAIPTMKFEREAFGSMEDAQCTICLGEYQEKEVLRIMPKCGHSFHLSCIDLW 900
           +GLEPV++AAIPTM F+REAF S+EDAQC+ICLGEY+EKEVLRIMPKCGHSFHL+CID+W
Sbjct: 61  SGLEPVLIAAIPTMTFDREAFSSIEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120

Query: 901 LRKQATCPVCRLSI 942
           LRKQ+TCPVCRL +
Sbjct: 121 LRKQSTCPVCRLPL 134


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