BLASTX nr result

ID: Atractylodes22_contig00007844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00007844
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518663.1| U520, putative [Ricinus communis] gi|2235420...   214   6e-54
ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa h...   213   1e-53
ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei...   213   1e-53
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]   213   1e-53
ref|XP_003546783.1| PREDICTED: U5 small nuclear ribonucleoprotei...   213   2e-53

>ref|XP_002518663.1| U520, putative [Ricinus communis] gi|223542044|gb|EEF43588.1| U520,
            putative [Ricinus communis]
          Length = 1809

 Score =  214 bits (545), Expect = 6e-54
 Identities = 99/107 (92%), Positives = 105/107 (98%)
 Frame = +1

Query: 1    GEYILHNEYFLLKKQYIDEDHTLNFTVPIYEPLPPQYFIKVVSDRWLGSLSVLPVSFRHL 180
            GEYILH+EYF+LKKQYIDEDHTLNFTVPIYEPLPPQYFI+VVSD+WLGS +VLPVSFRHL
Sbjct: 894  GEYILHHEYFMLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDKWLGSQTVLPVSFRHL 953

Query: 181  ILPEKYPPPTELLDLQPLPVTALRNPLYEALYQEFKHFNPVQTQVFT 321
            ILPEKYPPPTELLDLQPLPVTALRNP YEALYQ+FKHFNPVQTQVFT
Sbjct: 954  ILPEKYPPPTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVFT 1000


>ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Medicago
            truncatula] gi|355485040|gb|AES66243.1| U5 small nuclear
            ribonucleoprotein 200 kDa helicase [Medicago truncatula]
          Length = 2223

 Score =  213 bits (543), Expect = 1e-53
 Identities = 99/107 (92%), Positives = 105/107 (98%)
 Frame = +1

Query: 1    GEYILHNEYFLLKKQYIDEDHTLNFTVPIYEPLPPQYFIKVVSDRWLGSLSVLPVSFRHL 180
            GEYILH+EYFLLKKQYI+EDHTLNFTVPIYEPLPPQYFI+VVSD+WLGS +VLPVSFRHL
Sbjct: 1311 GEYILHHEYFLLKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSDKWLGSQTVLPVSFRHL 1370

Query: 181  ILPEKYPPPTELLDLQPLPVTALRNPLYEALYQEFKHFNPVQTQVFT 321
            ILPEKYPPPTELLDLQPLPVTALRNP YEALYQ+FKHFNPVQTQVFT
Sbjct: 1371 ILPEKYPPPTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVFT 1417


>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
            vinifera]
          Length = 2177

 Score =  213 bits (542), Expect = 1e-53
 Identities = 99/107 (92%), Positives = 104/107 (97%)
 Frame = +1

Query: 1    GEYILHNEYFLLKKQYIDEDHTLNFTVPIYEPLPPQYFIKVVSDRWLGSLSVLPVSFRHL 180
            GEYILH+EYF++KKQYIDE HTLNFTVPIYEPLPPQYFI+VVSDRWLGS SVLPVSFRHL
Sbjct: 1261 GEYILHHEYFMMKKQYIDEVHTLNFTVPIYEPLPPQYFIRVVSDRWLGSQSVLPVSFRHL 1320

Query: 181  ILPEKYPPPTELLDLQPLPVTALRNPLYEALYQEFKHFNPVQTQVFT 321
            ILPEKYPPPTELLDLQPLPVTALRNP YEALYQEFKHFNP+QTQVFT
Sbjct: 1321 ILPEKYPPPTELLDLQPLPVTALRNPSYEALYQEFKHFNPIQTQVFT 1367


>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
          Length = 2144

 Score =  213 bits (542), Expect = 1e-53
 Identities = 99/107 (92%), Positives = 104/107 (97%)
 Frame = +1

Query: 1    GEYILHNEYFLLKKQYIDEDHTLNFTVPIYEPLPPQYFIKVVSDRWLGSLSVLPVSFRHL 180
            GEYILH+EYF++KKQYIDE HTLNFTVPIYEPLPPQYFI+VVSDRWLGS SVLPVSFRHL
Sbjct: 1228 GEYILHHEYFMMKKQYIDEVHTLNFTVPIYEPLPPQYFIRVVSDRWLGSQSVLPVSFRHL 1287

Query: 181  ILPEKYPPPTELLDLQPLPVTALRNPLYEALYQEFKHFNPVQTQVFT 321
            ILPEKYPPPTELLDLQPLPVTALRNP YEALYQEFKHFNP+QTQVFT
Sbjct: 1288 ILPEKYPPPTELLDLQPLPVTALRNPSYEALYQEFKHFNPIQTQVFT 1334


>ref|XP_003546783.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Glycine max]
          Length = 2183

 Score =  213 bits (541), Expect = 2e-53
 Identities = 98/107 (91%), Positives = 105/107 (98%)
 Frame = +1

Query: 1    GEYILHNEYFLLKKQYIDEDHTLNFTVPIYEPLPPQYFIKVVSDRWLGSLSVLPVSFRHL 180
            GEYILH+EYF+LKKQYIDEDHTLNFTVPIYEPLPPQYFI+VVSDRWLGS +VLPVSFRHL
Sbjct: 1266 GEYILHHEYFMLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDRWLGSQTVLPVSFRHL 1325

Query: 181  ILPEKYPPPTELLDLQPLPVTALRNPLYEALYQEFKHFNPVQTQVFT 321
            ILPEKYPPPTELLDLQPLPVTALRNP YE+LY++FKHFNPVQTQVFT
Sbjct: 1326 ILPEKYPPPTELLDLQPLPVTALRNPSYESLYKDFKHFNPVQTQVFT 1372


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