BLASTX nr result
ID: Atractylodes22_contig00007770
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00007770
(893 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot... 313 4e-83
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 311 1e-82
ref|XP_002324295.1| rna-dependent RNA polymerase [Populus tricho... 311 1e-82
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata] 311 1e-82
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa] 311 2e-82
>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
Length = 1197
Score = 313 bits (801), Expect = 4e-83
Identities = 153/200 (76%), Positives = 172/200 (86%)
Frame = +1
Query: 1 CGRKYSFLAFSANQLRDRSAWFFAENGKIFCKDIISWMGKFNNKNVAKCAARMGQCFSST 180
CGRKYSFLAFSANQLRDRSAWFFAE+ KI IISWMG+F+N+NVAKCAARMGQCFSST
Sbjct: 502 CGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSST 561
Query: 181 YATVEVPRDEVDLKLEDIERNGYVFSDGIGKMSPELALEVAEKLQLEDNQPCAYQIRYAG 360
YATVEVP EV+ +L DIERNGYVFSDGIG +S +LALEVAEKL L N P AYQIRYAG
Sbjct: 562 YATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLALEVAEKLHLSVNPPSAYQIRYAG 621
Query: 361 CKGVIVWWPDKKGDNIKLSLRPSMNKFESEHTILEICNWTRLQPGFLNRQIITLLSALNV 540
CKGV+ WP K D I LSLRPSM KF+S HTILEIC+WTR QPGFLNRQI+TLLS+L+V
Sbjct: 622 CKGVVACWP-TKNDGILLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDV 680
Query: 541 QDGIFWDMQTKMVSKLNQML 600
+DGIFW+MQ +M+S LN+ML
Sbjct: 681 KDGIFWEMQKEMISGLNKML 700
Score = 90.1 bits (222), Expect = 6e-16
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = +2
Query: 737 ASCAESGNTASIMLAAGFKPQTEPHLRGMLSSIRVAQLEDLREKARIFVPDG 892
ASCAE+GNTA+IML+AGFKPQ+EPHLRGMLSSIR +QL DLR KARIFVP G
Sbjct: 712 ASCAEAGNTAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSG 763
>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Length = 1197
Score = 311 bits (798), Expect = 1e-82
Identities = 151/200 (75%), Positives = 173/200 (86%)
Frame = +1
Query: 1 CGRKYSFLAFSANQLRDRSAWFFAENGKIFCKDIISWMGKFNNKNVAKCAARMGQCFSST 180
CGRKYSFLAFSANQLRDRSAWFFAE+ KI IISWMG+F+N+NVAKCAARMGQCFSST
Sbjct: 502 CGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSST 561
Query: 181 YATVEVPRDEVDLKLEDIERNGYVFSDGIGKMSPELALEVAEKLQLEDNQPCAYQIRYAG 360
YATVEVP EV+ +L DIERNGYVFSDGIG +S +LA+EVAEKL L N P AYQIRYAG
Sbjct: 562 YATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAIEVAEKLHLSVNPPSAYQIRYAG 621
Query: 361 CKGVIVWWPDKKGDNIKLSLRPSMNKFESEHTILEICNWTRLQPGFLNRQIITLLSALNV 540
CKGV+ WP K D I+LSLRPSM KF+S HTILEIC+WTR QPGFLNRQI+TLLS+L+V
Sbjct: 622 CKGVVACWP-TKNDGIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDV 680
Query: 541 QDGIFWDMQTKMVSKLNQML 600
+DGIFW+MQ +M+S L++ML
Sbjct: 681 KDGIFWEMQKEMISGLDKML 700
Score = 89.4 bits (220), Expect = 1e-15
Identities = 42/52 (80%), Positives = 48/52 (92%)
Frame = +2
Query: 737 ASCAESGNTASIMLAAGFKPQTEPHLRGMLSSIRVAQLEDLREKARIFVPDG 892
ASCAE+GNTA++ML+AGFKPQ+EPHLRGMLSSIR +QL DLR KARIFVP G
Sbjct: 712 ASCAEAGNTAALMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSG 763
>ref|XP_002324295.1| rna-dependent RNA polymerase [Populus trichocarpa]
gi|222865729|gb|EEF02860.1| rna-dependent RNA polymerase
[Populus trichocarpa]
Length = 1200
Score = 311 bits (797), Expect = 1e-82
Identities = 148/199 (74%), Positives = 169/199 (84%)
Frame = +1
Query: 1 CGRKYSFLAFSANQLRDRSAWFFAENGKIFCKDIISWMGKFNNKNVAKCAARMGQCFSST 180
CGR+YSFLAFSANQLRD+SAWFF+E I D+ SWMGKF N+N+AKCAARMGQCFSST
Sbjct: 505 CGRRYSFLAFSANQLRDQSAWFFSEERNISVLDVKSWMGKFTNRNIAKCAARMGQCFSST 564
Query: 181 YATVEVPRDEVDLKLEDIERNGYVFSDGIGKMSPELALEVAEKLQLEDNQPCAYQIRYAG 360
YAT+EVP +EV+ L DIERNGYVFSDGIG ++P+LA EVAEKL+L+ + PCAYQIRYAG
Sbjct: 565 YATIEVPPEEVNSDLPDIERNGYVFSDGIGIITPDLAREVAEKLKLDIDPPCAYQIRYAG 624
Query: 361 CKGVIVWWPDKKGDNIKLSLRPSMNKFESEHTILEICNWTRLQPGFLNRQIITLLSALNV 540
CKGV+ WP KGD ++LSLRPSMNKF+S HT LEIC+WTR QPGFLNRQIITLLS LNV
Sbjct: 625 CKGVVACWPG-KGDGVRLSLRPSMNKFQSNHTTLEICSWTRFQPGFLNRQIITLLSTLNV 683
Query: 541 QDGIFWDMQTKMVSKLNQM 597
D +FW MQ MVSKLNQM
Sbjct: 684 PDAVFWKMQETMVSKLNQM 702
Score = 81.6 bits (200), Expect = 2e-13
Identities = 38/52 (73%), Positives = 43/52 (82%)
Frame = +2
Query: 737 ASCAESGNTASIMLAAGFKPQTEPHLRGMLSSIRVAQLEDLREKARIFVPDG 892
ASCA+ GN A+IML+AGFKP EPHLRGML+ +R AQL DLREK RIFVP G
Sbjct: 715 ASCADQGNVAAIMLSAGFKPDREPHLRGMLTCVRAAQLWDLREKTRIFVPSG 766
>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
Length = 1197
Score = 311 bits (797), Expect = 1e-82
Identities = 151/200 (75%), Positives = 173/200 (86%)
Frame = +1
Query: 1 CGRKYSFLAFSANQLRDRSAWFFAENGKIFCKDIISWMGKFNNKNVAKCAARMGQCFSST 180
CGRKYSFLAFSANQLRDRSAWFFAE+ KI IISWMG+F+N+NVAKCAARMGQCFSST
Sbjct: 502 CGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSST 561
Query: 181 YATVEVPRDEVDLKLEDIERNGYVFSDGIGKMSPELALEVAEKLQLEDNQPCAYQIRYAG 360
YATVEVP EV+ +L DIERNGYVFSDGIG +S +LA+EVAEKL L N P AYQIRYAG
Sbjct: 562 YATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAVEVAEKLHLSVNPPSAYQIRYAG 621
Query: 361 CKGVIVWWPDKKGDNIKLSLRPSMNKFESEHTILEICNWTRLQPGFLNRQIITLLSALNV 540
CKGV+ WP K D I+LSLRPSM KF+S HTILEIC+WTR QPGFLNRQI+TLLS+L+V
Sbjct: 622 CKGVVACWP-TKNDGIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDV 680
Query: 541 QDGIFWDMQTKMVSKLNQML 600
+DGIFW+MQ +M+S L++ML
Sbjct: 681 KDGIFWEMQKEMISGLDKML 700
Score = 90.1 bits (222), Expect = 6e-16
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = +2
Query: 737 ASCAESGNTASIMLAAGFKPQTEPHLRGMLSSIRVAQLEDLREKARIFVPDG 892
ASCAE+GNTA+IML+AGFKPQ+EPHLRGMLSSIR +QL DLR KARIFVP G
Sbjct: 712 ASCAEAGNTAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSG 763
>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
Length = 1197
Score = 311 bits (796), Expect = 2e-82
Identities = 150/200 (75%), Positives = 173/200 (86%)
Frame = +1
Query: 1 CGRKYSFLAFSANQLRDRSAWFFAENGKIFCKDIISWMGKFNNKNVAKCAARMGQCFSST 180
CGRKYSFLAFSANQLRDRSAWFFAE+ KI IISWMG+F+N+NVAKCAARMGQCFSST
Sbjct: 502 CGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSST 561
Query: 181 YATVEVPRDEVDLKLEDIERNGYVFSDGIGKMSPELALEVAEKLQLEDNQPCAYQIRYAG 360
YATVEVP EV+ +L DIERNGYVFSDGIG +S +LA+EVAEKL L N P AYQIRYAG
Sbjct: 562 YATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAIEVAEKLHLSVNPPAAYQIRYAG 621
Query: 361 CKGVIVWWPDKKGDNIKLSLRPSMNKFESEHTILEICNWTRLQPGFLNRQIITLLSALNV 540
CKGV+ WP K D I+LSLRPSM KF+S HTILEIC+WTR QPGFLNRQI+TLLS+L+V
Sbjct: 622 CKGVVACWP-TKNDGIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDV 680
Query: 541 QDGIFWDMQTKMVSKLNQML 600
+DGIFW+MQ +M++ L++ML
Sbjct: 681 KDGIFWEMQKEMIAGLDKML 700
Score = 89.4 bits (220), Expect = 1e-15
Identities = 42/52 (80%), Positives = 48/52 (92%)
Frame = +2
Query: 737 ASCAESGNTASIMLAAGFKPQTEPHLRGMLSSIRVAQLEDLREKARIFVPDG 892
ASCAE+GNTA++ML+AGFKPQ+EPHLRGMLSSIR +QL DLR KARIFVP G
Sbjct: 712 ASCAEAGNTAALMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSG 763