BLASTX nr result

ID: Atractylodes22_contig00007744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00007744
         (1279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284709.1| PREDICTED: eukaryotic translation initiation...   183   7e-44
ref|XP_004155737.1| PREDICTED: eukaryotic translation initiation...   178   3e-42
ref|XP_004140297.1| PREDICTED: eukaryotic translation initiation...   178   3e-42
ref|XP_002519577.1| Eukaryotic translation initiation factor 3 s...   177   4e-42
ref|XP_002305897.1| predicted protein [Populus trichocarpa] gi|2...   168   3e-39

>ref|XP_002284709.1| PREDICTED: eukaryotic translation initiation factor 3 subunit J
           [Vitis vinifera] gi|296088327|emb|CBI36772.3| unnamed
           protein product [Vitis vinifera]
          Length = 222

 Score =  183 bits (465), Expect = 7e-44
 Identities = 109/215 (50%), Positives = 125/215 (58%), Gaps = 1/215 (0%)
 Frame = +3

Query: 186 MEDWEDEP-APLVIKKDPKSIWXXXXXXXXXXXXSWXXXXXXXXXXXXXXXXXXXXXXXX 362
           MEDWEDEP  PL  K++PK+ W            SW                        
Sbjct: 1   MEDWEDEPITPLGKKEEPKNKWDDEDLDDDNVKESWEDEDEPAPAPVIQPPAEKPPKKPV 60

Query: 363 STAKPTQXXXXXXXXXXXXPLDPVAEKLRQQRLVEEADYKNTAELFATKKVDEKTIDNFI 542
              K T+             LDPVAEK+RQQRL+EEADYK+T ELFA K+ DEKT+D+FI
Sbjct: 61  E--KATEKKGKAVEAVTEVTLDPVAEKIRQQRLIEEADYKSTTELFA-KRGDEKTLDSFI 117

Query: 543 PKSESDFIEYAELISNKLRPYEKSFHYIGLLKSVIRLSMTSLKAADAKEVASSVTXXXXX 722
           PKSESDF+EYAELIS+KLR YEKSFHYIGLLK+V+RLSM SLKAADAKE+ASSVT     
Sbjct: 118 PKSESDFVEYAELISHKLRSYEKSFHYIGLLKAVMRLSMASLKAADAKEIASSVTAIANE 177

Query: 723 XXXXXXXXXXXXXXXXXXXXQLLVDKPDDEAVVNA 827
                               QL VDKPDD+ VVNA
Sbjct: 178 KLKAEKEANTGKKKIGAKKKQLHVDKPDDDVVVNA 212


>ref|XP_004155737.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           J-like [Cucumis sativus]
          Length = 220

 Score =  178 bits (451), Expect = 3e-42
 Identities = 104/213 (48%), Positives = 120/213 (56%)
 Frame = +3

Query: 186 MEDWEDEPAPLVIKKDPKSIWXXXXXXXXXXXXSWXXXXXXXXXXXXXXXXXXXXXXXXS 365
           M+DW+DE  P + K+ PK+ W            SW                         
Sbjct: 1   MDDWDDENIPPLQKEQPKNKWDDEDVDENDVKESWEDEDEPAPAPVVKPPEAAPKKP--- 57

Query: 366 TAKPTQXXXXXXXXXXXXPLDPVAEKLRQQRLVEEADYKNTAELFATKKVDEKTIDNFIP 545
            AK T+            PLDP+AEKLRQQRLVEEADYK+T ELF  KK DEKT+DNFIP
Sbjct: 58  AAKATEKKGKIVDVEPEQPLDPLAEKLRQQRLVEEADYKSTTELFK-KKGDEKTLDNFIP 116

Query: 546 KSESDFIEYAELISNKLRPYEKSFHYIGLLKSVIRLSMTSLKAADAKEVASSVTXXXXXX 725
           KSESDF+EYAELIS+KLRPYEKSFHYI LLK  IRLSM SLKAADAK+VASS+T      
Sbjct: 117 KSESDFVEYAELISHKLRPYEKSFHYINLLKDAIRLSMVSLKAADAKDVASSITALANEK 176

Query: 726 XXXXXXXXXXXXXXXXXXXQLLVDKPDDEAVVN 824
                              QL V+K DD+ +VN
Sbjct: 177 LKAEKDANTGKKKTSVKKKQLHVEKADDDLIVN 209


>ref|XP_004140297.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           J-like [Cucumis sativus]
          Length = 220

 Score =  178 bits (451), Expect = 3e-42
 Identities = 104/213 (48%), Positives = 120/213 (56%)
 Frame = +3

Query: 186 MEDWEDEPAPLVIKKDPKSIWXXXXXXXXXXXXSWXXXXXXXXXXXXXXXXXXXXXXXXS 365
           M+DW+DE  P + K+ PK+ W            SW                         
Sbjct: 1   MDDWDDENIPPLQKEQPKNKWDDEDVDENDVKESWEDEDEPAPAPVVKPPEAAPKKP--- 57

Query: 366 TAKPTQXXXXXXXXXXXXPLDPVAEKLRQQRLVEEADYKNTAELFATKKVDEKTIDNFIP 545
            AK T+            PLDP+AEKLRQQRLVEEADYK+T ELF  KK DEKT+DNFIP
Sbjct: 58  AAKATEKKGKIVDVEPERPLDPLAEKLRQQRLVEEADYKSTTELFK-KKGDEKTLDNFIP 116

Query: 546 KSESDFIEYAELISNKLRPYEKSFHYIGLLKSVIRLSMTSLKAADAKEVASSVTXXXXXX 725
           KSESDF+EYAELIS+KLRPYEKSFHYI LLK  IRLSM SLKAADAK+VASS+T      
Sbjct: 117 KSESDFVEYAELISHKLRPYEKSFHYINLLKDAIRLSMVSLKAADAKDVASSITALANEK 176

Query: 726 XXXXXXXXXXXXXXXXXXXQLLVDKPDDEAVVN 824
                              QL V+K DD+ +VN
Sbjct: 177 LKAEKDANTGKKKTSVKKKQLHVEKADDDLIVN 209


>ref|XP_002519577.1| Eukaryotic translation initiation factor 3 subunit, putative
           [Ricinus communis] gi|223541235|gb|EEF42788.1|
           Eukaryotic translation initiation factor 3 subunit,
           putative [Ricinus communis]
          Length = 222

 Score =  177 bits (450), Expect = 4e-42
 Identities = 108/220 (49%), Positives = 129/220 (58%), Gaps = 6/220 (2%)
 Frame = +3

Query: 186 MEDWEDEPAP-LVIKKDPKSIWXXXXXXXXXXXXSWXXXXXXXXXXXXXXXXXXXXXXXX 362
           MEDWEDE  P L++K+ PKS W            SW                        
Sbjct: 1   MEDWEDEQIPPLILKEQPKSKWDDEDVDDNDVKESWEDEDEPAPEPVAKPPPEK------ 54

Query: 363 STAKPT-----QXXXXXXXXXXXXPLDPVAEKLRQQRLVEEADYKNTAELFATKKVDEKT 527
           +T KP      +            PLDPVAEKLRQQRLVEEADY++T ELF  K+ DEKT
Sbjct: 55  ATKKPVTKSIEKKGKTVVAKEESQPLDPVAEKLRQQRLVEEADYRSTTELFG-KRGDEKT 113

Query: 528 IDNFIPKSESDFIEYAELISNKLRPYEKSFHYIGLLKSVIRLSMTSLKAADAKEVASSVT 707
           +DNFIPKSESDF+EYAEL+S+KLRPYEKSFHYIGLLK+V+RLSMT++KAADAK+VASSVT
Sbjct: 114 LDNFIPKSESDFLEYAELVSHKLRPYEKSFHYIGLLKAVMRLSMTAMKAADAKDVASSVT 173

Query: 708 XXXXXXXXXXXXXXXXXXXXXXXXXQLLVDKPDDEAVVNA 827
                                    QL VDKPD++ VV++
Sbjct: 174 -AIANEKLKAEKEANAGKKKGGKKKQLHVDKPDEDLVVDS 212


>ref|XP_002305897.1| predicted protein [Populus trichocarpa] gi|222848861|gb|EEE86408.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  168 bits (425), Expect = 3e-39
 Identities = 100/210 (47%), Positives = 120/210 (57%), Gaps = 1/210 (0%)
 Frame = +3

Query: 186 MEDWEDEPAPLVIKKD-PKSIWXXXXXXXXXXXXSWXXXXXXXXXXXXXXXXXXXXXXXX 362
           MEDWEDE  P ++ KD PKS W            SW                        
Sbjct: 1   MEDWEDEQVPPLVAKDQPKSKWDDEDVDEDDVKESWEDEDEPDPAPVVKPPPEMAPKKP- 59

Query: 363 STAKPTQXXXXXXXXXXXXPLDPVAEKLRQQRLVEEADYKNTAELFATKKVDEKTIDNFI 542
              K T+            PLDP+AEKLRQQRLVEEAD+++TAELF  KK DEK++D+FI
Sbjct: 60  -AVKSTEKKGNTTDVVKDQPLDPLAEKLRQQRLVEEADFRSTAELFG-KKDDEKSLDSFI 117

Query: 543 PKSESDFIEYAELISNKLRPYEKSFHYIGLLKSVIRLSMTSLKAADAKEVASSVTXXXXX 722
           PKSESDF+EYAELISNKLRP+EKS+HYI LLK+V+RLSMTS+KAADAKEV++SV+     
Sbjct: 118 PKSESDFLEYAELISNKLRPFEKSYHYIHLLKAVMRLSMTSMKAADAKEVSTSVSAIANE 177

Query: 723 XXXXXXXXXXXXXXXXXXXXQLLVDKPDDE 812
                               QL V KP D+
Sbjct: 178 KIKAEKEANTGKKKTGGKKKQLHVGKPGDD 207


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