BLASTX nr result

ID: Atractylodes22_contig00007683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00007683
         (691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17535.3| unnamed protein product [Vitis vinifera]              266   2e-69
ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotei...   266   2e-69
gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]      265   8e-69
ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, p...   264   1e-68
ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotei...   257   2e-66

>emb|CBI17535.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  266 bits (681), Expect = 2e-69
 Identities = 129/166 (77%), Positives = 139/166 (83%)
 Frame = +3

Query: 192 MGDYNDAFMRNNNAAVQARTKQQNRANLMQMKLIGQSHPTGLTNNLLKLFXXXXXXXXXX 371
           MGDYNDA MRNNNAAVQARTK QNRAN++Q+KLIGQSHPTGLT NLLKLF          
Sbjct: 1   MGDYNDALMRNNNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60

Query: 372 XXXXXXCPSYTGMAQFVSNFAEPTDPEYAPPVQKGETPGQRRARIHQLRLEEGARKAAEE 551
                 CP YTGMAQF SNFAEP +PEY+PPVQK ETP QRRARIH+LRLE+GA KA EE
Sbjct: 61  PPEKRKCPPYTGMAQFASNFAEPGEPEYSPPVQKAETPAQRRARIHKLRLEKGAEKATEE 120

Query: 552 LEKYDPNSDPNVSGDPYKTLFVARLNYETTESRIKREFEAYGPIKR 689
            +KYDPN+DPN+SGDPYKTLFVARLNYETTESRIKREFEAYGPIKR
Sbjct: 121 FQKYDPNNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKR 166


>ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Vitis
           vinifera]
          Length = 514

 Score =  266 bits (681), Expect = 2e-69
 Identities = 129/166 (77%), Positives = 139/166 (83%)
 Frame = +3

Query: 192 MGDYNDAFMRNNNAAVQARTKQQNRANLMQMKLIGQSHPTGLTNNLLKLFXXXXXXXXXX 371
           MGDYNDA MRNNNAAVQARTK QNRAN++Q+KLIGQSHPTGLT NLLKLF          
Sbjct: 1   MGDYNDALMRNNNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60

Query: 372 XXXXXXCPSYTGMAQFVSNFAEPTDPEYAPPVQKGETPGQRRARIHQLRLEEGARKAAEE 551
                 CP YTGMAQF SNFAEP +PEY+PPVQK ETP QRRARIH+LRLE+GA KA EE
Sbjct: 61  PPEKRKCPPYTGMAQFASNFAEPGEPEYSPPVQKAETPAQRRARIHKLRLEKGAEKATEE 120

Query: 552 LEKYDPNSDPNVSGDPYKTLFVARLNYETTESRIKREFEAYGPIKR 689
            +KYDPN+DPN+SGDPYKTLFVARLNYETTESRIKREFEAYGPIKR
Sbjct: 121 FQKYDPNNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKR 166


>gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]
          Length = 532

 Score =  265 bits (676), Expect = 8e-69
 Identities = 130/166 (78%), Positives = 140/166 (84%)
 Frame = +3

Query: 192 MGDYNDAFMRNNNAAVQARTKQQNRANLMQMKLIGQSHPTGLTNNLLKLFXXXXXXXXXX 371
           MGDY+DA MRN NAAVQARTK QNRAN+MQ+KLIGQSHPTGLT NLLKLF          
Sbjct: 1   MGDYSDALMRNQNAAVQARTKAQNRANVMQLKLIGQSHPTGLTTNLLKLFEPRPPLEYKP 60

Query: 372 XXXXXXCPSYTGMAQFVSNFAEPTDPEYAPPVQKGETPGQRRARIHQLRLEEGARKAAEE 551
                 CP YTGMAQFVSNFA+P D EYAPPVQK ETP +RRARIH++RLEEGA+KAAEE
Sbjct: 61  PPEKRKCPPYTGMAQFVSNFAQPGDAEYAPPVQKAETPVERRARIHKIRLEEGAKKAAEE 120

Query: 552 LEKYDPNSDPNVSGDPYKTLFVARLNYETTESRIKREFEAYGPIKR 689
           LEKYDPN+DPN+SGDPYKTLFVARLNYETTESRIKREFEAYG IKR
Sbjct: 121 LEKYDPNNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGAIKR 166


>ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
           communis] gi|223539286|gb|EEF40879.1| U1 small nuclear
           ribonucleoprotein 70 kDa, putative [Ricinus communis]
          Length = 506

 Score =  264 bits (674), Expect = 1e-68
 Identities = 129/166 (77%), Positives = 139/166 (83%)
 Frame = +3

Query: 192 MGDYNDAFMRNNNAAVQARTKQQNRANLMQMKLIGQSHPTGLTNNLLKLFXXXXXXXXXX 371
           MGDYNDAFMRN NAAV+  TK QNRAN++Q+KLIGQSHPTGLT NLLKLF          
Sbjct: 1   MGDYNDAFMRNQNAAVRGATKGQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60

Query: 372 XXXXXXCPSYTGMAQFVSNFAEPTDPEYAPPVQKGETPGQRRARIHQLRLEEGARKAAEE 551
                 CP YTGMAQFV+ FAEP DPEYAPPVQ+ ETP QRRARIHQLRLE+GA KAAEE
Sbjct: 61  PPEKRKCPPYTGMAQFVTQFAEPGDPEYAPPVQEAETPTQRRARIHQLRLEKGAEKAAEE 120

Query: 552 LEKYDPNSDPNVSGDPYKTLFVARLNYETTESRIKREFEAYGPIKR 689
           L+KYDPNSDPN+SGDPYKTLFVARLNYETTESRIKREFE+YGPIKR
Sbjct: 121 LQKYDPNSDPNISGDPYKTLFVARLNYETTESRIKREFESYGPIKR 166


>ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
           sativus] gi|449504870|ref|XP_004162317.1| PREDICTED: U1
           small nuclear ribonucleoprotein 70 kDa-like [Cucumis
           sativus]
          Length = 505

 Score =  257 bits (656), Expect = 2e-66
 Identities = 128/166 (77%), Positives = 136/166 (81%)
 Frame = +3

Query: 192 MGDYNDAFMRNNNAAVQARTKQQNRANLMQMKLIGQSHPTGLTNNLLKLFXXXXXXXXXX 371
           MGDYNDAFMRN NAAVQARTK QNRAN++Q+KLIGQSHPTGLT NLLKLF          
Sbjct: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60

Query: 372 XXXXXXCPSYTGMAQFVSNFAEPTDPEYAPPVQKGETPGQRRARIHQLRLEEGARKAAEE 551
                 CP  TGMAQFVSNFAEP DPEYAPPVQKGETP +RRARIH LR+E+GA KAAEE
Sbjct: 61  PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPTERRARIHLLRIEKGAEKAAEE 120

Query: 552 LEKYDPNSDPNVSGDPYKTLFVARLNYETTESRIKREFEAYGPIKR 689
           L KY    DPNV+GDPYKTLFVARLNYETTESRIKREFE+YGPIKR
Sbjct: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKR 166


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