BLASTX nr result

ID: Atractylodes22_contig00007676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00007676
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [V...   129   1e-29
emb|CBI28269.3| unnamed protein product [Vitis vinifera]              129   1e-29
emb|CAC17702.1| transcription factor (E2F) [Chenopodium rubrum]       129   3e-28
ref|XP_002328241.1| transcription factor E2F [Populus trichocarp...   120   7e-28
ref|XP_004166944.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...   125   5e-27

>ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [Vitis vinifera]
          Length = 457

 Score =  129 bits (323), Expect(2) = 1e-29
 Identities = 72/115 (62%), Positives = 81/115 (70%), Gaps = 2/115 (1%)
 Frame = +2

Query: 2   VSQFEEKIEEINRAEANPSIPSISEMVENPTIETAMEVSQEYGIGMQSTDTHTCS-DVNA 178
           VSQFEEK EEIN  EA PS PS S   E+PT     E S+   I +Q  D H  S D+NA
Sbjct: 315 VSQFEEKFEEINGLEAPPSFPSSSGYNEDPTAAMVTEESRGKEIEIQGQDAHRMSSDLNA 374

Query: 179 SEDFVSGIMKIVP-DIDSDADYWLLSDVDVSITDMWRTESSVDVEWNDMGMLPDN 340
           S+DFVSGIMKIVP D+DSDADYWLLSD DVSITDMWRTE    VEWN++  L D+
Sbjct: 375 SQDFVSGIMKIVPSDVDSDADYWLLSDADVSITDMWRTEPG--VEWNELDALNDD 427



 Score = 26.6 bits (57), Expect(2) = 1e-29
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 406 AMPGVTTPHPQTPTSDALQ 462
           AM  V+TP PQTP S A +
Sbjct: 429 AMANVSTPQPQTPPSSAAE 447


>emb|CBI28269.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score =  129 bits (323), Expect(2) = 1e-29
 Identities = 72/115 (62%), Positives = 81/115 (70%), Gaps = 2/115 (1%)
 Frame = +2

Query: 2   VSQFEEKIEEINRAEANPSIPSISEMVENPTIETAMEVSQEYGIGMQSTDTHTCS-DVNA 178
           VSQFEEK EEIN  EA PS PS S   E+PT     E S+   I +Q  D H  S D+NA
Sbjct: 304 VSQFEEKFEEINGLEAPPSFPSSSGYNEDPTAAMVTEESRGKEIEIQGQDAHRMSSDLNA 363

Query: 179 SEDFVSGIMKIVP-DIDSDADYWLLSDVDVSITDMWRTESSVDVEWNDMGMLPDN 340
           S+DFVSGIMKIVP D+DSDADYWLLSD DVSITDMWRTE    VEWN++  L D+
Sbjct: 364 SQDFVSGIMKIVPSDVDSDADYWLLSDADVSITDMWRTEPG--VEWNELDALNDD 416



 Score = 26.6 bits (57), Expect(2) = 1e-29
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 406 AMPGVTTPHPQTPTSDALQ 462
           AM  V+TP PQTP S A +
Sbjct: 418 AMANVSTPQPQTPPSSAAE 436


>emb|CAC17702.1| transcription factor (E2F) [Chenopodium rubrum]
          Length = 454

 Score =  129 bits (325), Expect = 3e-28
 Identities = 69/114 (60%), Positives = 84/114 (73%), Gaps = 1/114 (0%)
 Frame = +2

Query: 2   VSQFEEKIEEINRAEANPSIPSISEMVENPTIETAMEVSQEYGIGMQSTDTHT-CSDVNA 178
           VSQFEEK EEI+ AE  PSIPS S   E+ T   A E +++    MQ  +TH  CSD NA
Sbjct: 315 VSQFEEKFEEISGAEPPPSIPSTSGYNEDTTT-AAKEENRDDETKMQGQETHRICSDANA 373

Query: 179 SEDFVSGIMKIVPDIDSDADYWLLSDVDVSITDMWRTESSVDVEWNDMGMLPDN 340
            +DFVSGIMKIVP++DSDADYWLLSD DVSITDMWRT+S   VEWN++G + ++
Sbjct: 374 QQDFVSGIMKIVPEVDSDADYWLLSDADVSITDMWRTDSG--VEWNELGTIHED 425


>ref|XP_002328241.1| transcription factor E2F [Populus trichocarpa]
           gi|222837756|gb|EEE76121.1| transcription factor E2F
           [Populus trichocarpa]
          Length = 455

 Score =  120 bits (302), Expect(2) = 7e-28
 Identities = 67/112 (59%), Positives = 75/112 (66%), Gaps = 2/112 (1%)
 Frame = +2

Query: 2   VSQFEEKIEEINRAEANPSIPSISEMVENPTIETAMEVSQEYGIGMQSTDTHT-CSDVNA 178
           VSQFEEKIE+I   E  PS PS S   ENP     ME S+   + MQ  D H  CS++N 
Sbjct: 313 VSQFEEKIEDIQGVEPPPSYPSTSGFNENPATTMTMEESRGKEVEMQEQDGHRMCSELNT 372

Query: 179 SEDFVSGIMKIVP-DIDSDADYWLLSDVDVSITDMWRTESSVDVEWNDMGML 331
           + DFVSGIMKIVP D+DSDADYWLLSD  VSITDMWR E    VEWND+  L
Sbjct: 373 AHDFVSGIMKIVPSDVDSDADYWLLSDPGVSITDMWRNEPV--VEWNDLDTL 422



 Score = 28.5 bits (62), Expect(2) = 7e-28
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +1

Query: 409 MPGVTTPHPQTPTSDALQDANPTGTN 486
           MP V TP PQTP S+  +   P GTN
Sbjct: 428 MPNVCTPQPQTPPSNPTE--VPPGTN 451


>ref|XP_004166944.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor E2FB-like
           [Cucumis sativus]
          Length = 462

 Score =  125 bits (314), Expect = 5e-27
 Identities = 68/110 (61%), Positives = 78/110 (70%), Gaps = 2/110 (1%)
 Frame = +2

Query: 2   VSQFEEKIEEINRAEANPSIPSISEMVENPTIETAMEVSQEYGIGMQSTDTHT-CSDVNA 178
           VSQFE K EEIN AE  PS+PS S + E PT     E ++   I  +  D H  CSD+NA
Sbjct: 320 VSQFEAKFEEINAAEVPPSLPSSSGLNEAPTTTLVTEDTRGKEIETREQDVHRMCSDLNA 379

Query: 179 SEDFVSGIMKIVPDI-DSDADYWLLSDVDVSITDMWRTESSVDVEWNDMG 325
           S+DFV GIMKIVP + DSDADYWLLSD DVSITDMWRTE S  VEWN++G
Sbjct: 380 SQDFVGGIMKIVPSVVDSDADYWLLSDADVSITDMWRTEPS--VEWNELG 427


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