BLASTX nr result

ID: Atractylodes22_contig00007642 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00007642
         (1211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517659.1| U3 small nucleolar RNA-associated protein, p...   229   1e-57
ref|XP_002322578.1| predicted protein [Populus trichocarpa] gi|2...   224   3e-56
ref|XP_002265743.1| PREDICTED: probable U3 small nucleolar RNA-a...   224   4e-56
emb|CAN82884.1| hypothetical protein VITISV_023155 [Vitis vinifera]   224   4e-56
gb|AFW84805.1| U3 small nucleolar RNA-associated protein 11 [Zea...   222   1e-55

>ref|XP_002517659.1| U3 small nucleolar RNA-associated protein, putative [Ricinus
            communis] gi|223543291|gb|EEF44823.1| U3 small nucleolar
            RNA-associated protein, putative [Ricinus communis]
          Length = 231

 Score =  229 bits (583), Expect = 1e-57
 Identities = 110/169 (65%), Positives = 138/169 (81%)
 Frame = +2

Query: 521  MSSLRNAVHRRAHKERAQPKERKRFGLLEKHKDYVVRAKAFHXXXXXXXXXXXXAAFRNP 700
            MSSLRNA+ R+AHKER+QP+ RK++GLLEKHKDY+VRAKAFH            AAFRNP
Sbjct: 1    MSSLRNAIPRKAHKERSQPQSRKKYGLLEKHKDYIVRAKAFHKKEEALQRLKEKAAFRNP 60

Query: 701  DEFYFKMINSKTVNGVHKQAGEANKYTQEELMLMKSQDIGYILQKVQSEKKKIEKLTATL 880
            DEFYFKMI ++TV+GVH+   +ANKYT+EEL+LMK+QDIGYILQK+QSEKKKIEKLTATL
Sbjct: 61   DEFYFKMIKTRTVDGVHRPESQANKYTEEELLLMKTQDIGYILQKLQSEKKKIEKLTATL 120

Query: 881  HSLDAQPSNKHVYYAEDREDAKRILSETKSVGGMQAFENLPDKIKR*SN 1027
            HSL  QPSN+H+YY EDRE+AK + S++ +   + A E++P++IKR  N
Sbjct: 121  HSLKNQPSNRHIYYVEDREEAKELRSQSSANEIVPALEHVPEQIKRKMN 169


>ref|XP_002322578.1| predicted protein [Populus trichocarpa] gi|222867208|gb|EEF04339.1|
            predicted protein [Populus trichocarpa]
          Length = 229

 Score =  224 bits (571), Expect = 3e-56
 Identities = 113/166 (68%), Positives = 129/166 (77%)
 Frame = +2

Query: 521  MSSLRNAVHRRAHKERAQPKERKRFGLLEKHKDYVVRAKAFHXXXXXXXXXXXXAAFRNP 700
            MSSLRNA+ R+AHKERAQP+ RK+FGLLEKHKDYV RAKAFH            AA RNP
Sbjct: 1    MSSLRNAIPRKAHKERAQPQARKKFGLLEKHKDYVARAKAFHKKEETLRRLKEKAASRNP 60

Query: 701  DEFYFKMINSKTVNGVHKQAGEANKYTQEELMLMKSQDIGYILQKVQSEKKKIEKLTATL 880
            DEFYF MI SKTV+GVH+   EANKYTQEEL+LMK+QDIGYILQK QSEKKKIEKLTATL
Sbjct: 61   DEFYFGMIKSKTVDGVHRPQSEANKYTQEELLLMKTQDIGYILQKAQSEKKKIEKLTATL 120

Query: 881  HSLDAQPSNKHVYYAEDREDAKRILSETKSVGGMQAFENLPDKIKR 1018
            HSLD +PS+KH+Y+AEDRE+AK I S +          ++PD IKR
Sbjct: 121  HSLDGRPSSKHIYFAEDREEAKEIRSRSSENKMATTSVDVPDNIKR 166


>ref|XP_002265743.1| PREDICTED: probable U3 small nucleolar RNA-associated protein 11
            [Vitis vinifera] gi|239056174|emb|CAQ58608.1| unknown
            gene [Vitis vinifera] gi|239056194|emb|CAQ58632.1|
            unknown protein / putative CGI-94 protein [Vitis
            vinifera] gi|296085811|emb|CBI31135.3| unnamed protein
            product [Vitis vinifera]
          Length = 229

 Score =  224 bits (570), Expect = 4e-56
 Identities = 108/166 (65%), Positives = 134/166 (80%)
 Frame = +2

Query: 521  MSSLRNAVHRRAHKERAQPKERKRFGLLEKHKDYVVRAKAFHXXXXXXXXXXXXAAFRNP 700
            MSS RNA+ RRA+KERAQP  RK+FGLLEKHKDYVVRA+AFH            AAFRNP
Sbjct: 1    MSSFRNAISRRAYKERAQPHLRKKFGLLEKHKDYVVRAQAFHKKEEALQKLKEKAAFRNP 60

Query: 701  DEFYFKMINSKTVNGVHKQAGEANKYTQEELMLMKSQDIGYILQKVQSEKKKIEKLTATL 880
            DEFYFKMI ++TV+GVH+   +ANKY+ EELMLMK+QD+GY+LQKVQSEKKKIEKLTA L
Sbjct: 61   DEFYFKMIKTRTVDGVHRPESQANKYSPEELMLMKTQDMGYVLQKVQSEKKKIEKLTAML 120

Query: 881  HSLDAQPSNKHVYYAEDREDAKRILSETKSVGGMQAFENLPDKIKR 1018
            HSLD QP+N+HVYYAEDRE+A+ I +++   G + + +++P+ IKR
Sbjct: 121  HSLDNQPTNRHVYYAEDREEAREIQAQSSRGGNLPSLDDVPNHIKR 166


>emb|CAN82884.1| hypothetical protein VITISV_023155 [Vitis vinifera]
          Length = 229

 Score =  224 bits (570), Expect = 4e-56
 Identities = 108/166 (65%), Positives = 134/166 (80%)
 Frame = +2

Query: 521  MSSLRNAVHRRAHKERAQPKERKRFGLLEKHKDYVVRAKAFHXXXXXXXXXXXXAAFRNP 700
            MSS RNA+ RRA+KERAQP  RK+FGLLEKHKDYVVRA+AFH            AAFRNP
Sbjct: 1    MSSFRNAISRRAYKERAQPHLRKKFGLLEKHKDYVVRAQAFHKKEEALQKLKEKAAFRNP 60

Query: 701  DEFYFKMINSKTVNGVHKQAGEANKYTQEELMLMKSQDIGYILQKVQSEKKKIEKLTATL 880
            DEFYFKMI ++TV+GVH+   +ANKY+ EELMLMK+QD+GY+LQKVQSEKKKIEKLTA L
Sbjct: 61   DEFYFKMIKTRTVDGVHRPESQANKYSPEELMLMKTQDMGYVLQKVQSEKKKIEKLTAML 120

Query: 881  HSLDAQPSNKHVYYAEDREDAKRILSETKSVGGMQAFENLPDKIKR 1018
            HSLD QP+N+HVYYAEDRE+A+ I +++   G + + +++P+ IKR
Sbjct: 121  HSLDNQPTNRHVYYAEDREEAREIQAQSSRGGNLPSLDDVPNHIKR 166


>gb|AFW84805.1| U3 small nucleolar RNA-associated protein 11 [Zea mays]
          Length = 232

 Score =  222 bits (566), Expect = 1e-55
 Identities = 107/166 (64%), Positives = 130/166 (78%)
 Frame = +2

Query: 521  MSSLRNAVHRRAHKERAQPKERKRFGLLEKHKDYVVRAKAFHXXXXXXXXXXXXAAFRNP 700
            MSSLRNA+ RRAHKERAQP+ RK+FGLLEKHKDYVVRA+A+H            AAFRNP
Sbjct: 1    MSSLRNAIPRRAHKERAQPEARKKFGLLEKHKDYVVRARAYHIKEATIAKLKEKAAFRNP 60

Query: 701  DEFYFKMINSKTVNGVHKQAGEANKYTQEELMLMKSQDIGYILQKVQSEKKKIEKLTATL 880
            DEFYFKMINS+TV G+H+   E NKYT+EEL+L+K++D+GYILQ VQSEKKKIEKL++TL
Sbjct: 61   DEFYFKMINSRTVGGIHRPKPEDNKYTEEELLLLKNKDMGYILQSVQSEKKKIEKLSSTL 120

Query: 881  HSLDAQPSNKHVYYAEDREDAKRILSETKSVGGMQAFENLPDKIKR 1018
            H LD +P NKHVY+AEDRE+AK I S       M   +N+P +IK+
Sbjct: 121  HELDNKPQNKHVYFAEDREEAKEIQSRIGQSSNMPDLDNIPSRIKK 166


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