BLASTX nr result

ID: Atractylodes22_contig00007639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00007639
         (1485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AET79382.1| spermidine synthase [Populus tomentosa]                 78   5e-12
gb|ACT21542.1| spermidine synthase [Panax ginseng]                     77   2e-11
ref|XP_002888767.1| hypothetical protein ARALYDRAFT_476155 [Arab...    75   6e-11
dbj|BAC20171.1| spermidine synthase [Malus x domestica]                73   2e-10
ref|NP_177188.1| Spermidine synthase 2 [Arabidopsis thaliana] gi...    73   2e-10

>gb|AET79382.1| spermidine synthase [Populus tomentosa]
          Length = 335

 Score = 78.2 bits (191), Expect = 5e-12
 Identities = 39/65 (60%), Positives = 49/65 (75%), Gaps = 8/65 (12%)
 Frame = -2

Query: 173 MAEQTIVATVSDLPLKRPREVADNGAATS--------ETSGCISSVIPGWFSEISPMWPG 18
           MAE+++V   +DLP+KRPRE  +NGA+ +         ++ CISSVIPGWFSEISPMWPG
Sbjct: 1   MAEESVV---TDLPVKRPREDEENGASAATEAMETETNSNDCISSVIPGWFSEISPMWPG 57

Query: 17  EAHSL 3
           EAHSL
Sbjct: 58  EAHSL 62


>gb|ACT21542.1| spermidine synthase [Panax ginseng]
          Length = 333

 Score = 76.6 bits (187), Expect = 2e-11
 Identities = 38/61 (62%), Positives = 47/61 (77%), Gaps = 4/61 (6%)
 Frame = -2

Query: 173 MAEQT--IVATVSDLPLKRPREVADNGAATSETSGC--ISSVIPGWFSEISPMWPGEAHS 6
           MAE++  +V+ ++DLP+KRP E  DNG  + E  G   IS+VIPGWFSEISPMWPGEAHS
Sbjct: 1   MAEESGVVVSVLTDLPVKRPSEGKDNGVVSVEMEGTNNISAVIPGWFSEISPMWPGEAHS 60

Query: 5   L 3
           L
Sbjct: 61  L 61


>ref|XP_002888767.1| hypothetical protein ARALYDRAFT_476155 [Arabidopsis lyrata subsp.
           lyrata] gi|297334608|gb|EFH65026.1| hypothetical protein
           ARALYDRAFT_476155 [Arabidopsis lyrata subsp. lyrata]
          Length = 340

 Score = 74.7 bits (182), Expect = 6e-11
 Identities = 38/60 (63%), Positives = 44/60 (73%), Gaps = 10/60 (16%)
 Frame = -2

Query: 152 ATVSDLPLKRPREVAD--NGAATSETSG--------CISSVIPGWFSEISPMWPGEAHSL 3
           A+V+DLP+KRPRE  +  NGAA    +G        C+SSVIPGWFSEISPMWPGEAHSL
Sbjct: 7   ASVTDLPVKRPREAEEDNNGAAMETENGGGEIKEPSCMSSVIPGWFSEISPMWPGEAHSL 66


>dbj|BAC20171.1| spermidine synthase [Malus x domestica]
          Length = 335

 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 39/68 (57%), Positives = 48/68 (70%), Gaps = 11/68 (16%)
 Frame = -2

Query: 173 MAEQTIVATVSDLPLKRPREVADNGAATS------ETSG-----CISSVIPGWFSEISPM 27
           MA++ +V + +DLPLKRPRE  +NGA  +      ET G      +S+VIPGWFSEISPM
Sbjct: 1   MADEIVVGS-ADLPLKRPREEEENGAEAAASAVSMETDGGKEPDSVSAVIPGWFSEISPM 59

Query: 26  WPGEAHSL 3
           WPGEAHSL
Sbjct: 60  WPGEAHSL 67


>ref|NP_177188.1| Spermidine synthase 2 [Arabidopsis thaliana]
           gi|12644069|sp|O48661.2|SPD2_ARATH RecName:
           Full=Spermidine synthase 2; Short=SPDSY 2; AltName:
           Full=Putrescine aminopropyltransferase 2
           gi|14030637|gb|AAK52993.1|AF375409_1 At1g70310/F17O7_16
           [Arabidopsis thaliana] gi|3176685|gb|AAC18808.1| Strong
           similarity to spermidine synthase 1, gb|Y08252 and
           possibly closer similarity to spermidine synthase 2
           gb|Y08253 from Datura stramonium. ESTs gb|N38155,
           gb|T41738, gb|AA597626, gb|AA712967 and gb|AA712346 come
           from this gene [Arabidopsis thaliana]
           gi|6468491|emb|CAB61615.1| spermidine synthase 2
           [Arabidopsis thaliana] gi|56381993|gb|AAV85715.1|
           At1g70310 [Arabidopsis thaliana]
           gi|332196923|gb|AEE35044.1| Spermidine synthase 2
           [Arabidopsis thaliana]
          Length = 340

 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 36/60 (60%), Positives = 44/60 (73%), Gaps = 10/60 (16%)
 Frame = -2

Query: 152 ATVSDLPLKRPREVADN---GAATSETSG-------CISSVIPGWFSEISPMWPGEAHSL 3
           A+V+DLP+KRPRE  ++   GA  +E  G       C+SS+IPGWFSEISPMWPGEAHSL
Sbjct: 7   ASVTDLPVKRPREAEEDNNGGAMETENGGGEIKEPSCMSSIIPGWFSEISPMWPGEAHSL 66


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