BLASTX nr result
ID: Atractylodes22_contig00007639
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes22_contig00007639 (1485 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AET79382.1| spermidine synthase [Populus tomentosa] 78 5e-12 gb|ACT21542.1| spermidine synthase [Panax ginseng] 77 2e-11 ref|XP_002888767.1| hypothetical protein ARALYDRAFT_476155 [Arab... 75 6e-11 dbj|BAC20171.1| spermidine synthase [Malus x domestica] 73 2e-10 ref|NP_177188.1| Spermidine synthase 2 [Arabidopsis thaliana] gi... 73 2e-10 >gb|AET79382.1| spermidine synthase [Populus tomentosa] Length = 335 Score = 78.2 bits (191), Expect = 5e-12 Identities = 39/65 (60%), Positives = 49/65 (75%), Gaps = 8/65 (12%) Frame = -2 Query: 173 MAEQTIVATVSDLPLKRPREVADNGAATS--------ETSGCISSVIPGWFSEISPMWPG 18 MAE+++V +DLP+KRPRE +NGA+ + ++ CISSVIPGWFSEISPMWPG Sbjct: 1 MAEESVV---TDLPVKRPREDEENGASAATEAMETETNSNDCISSVIPGWFSEISPMWPG 57 Query: 17 EAHSL 3 EAHSL Sbjct: 58 EAHSL 62 >gb|ACT21542.1| spermidine synthase [Panax ginseng] Length = 333 Score = 76.6 bits (187), Expect = 2e-11 Identities = 38/61 (62%), Positives = 47/61 (77%), Gaps = 4/61 (6%) Frame = -2 Query: 173 MAEQT--IVATVSDLPLKRPREVADNGAATSETSGC--ISSVIPGWFSEISPMWPGEAHS 6 MAE++ +V+ ++DLP+KRP E DNG + E G IS+VIPGWFSEISPMWPGEAHS Sbjct: 1 MAEESGVVVSVLTDLPVKRPSEGKDNGVVSVEMEGTNNISAVIPGWFSEISPMWPGEAHS 60 Query: 5 L 3 L Sbjct: 61 L 61 >ref|XP_002888767.1| hypothetical protein ARALYDRAFT_476155 [Arabidopsis lyrata subsp. lyrata] gi|297334608|gb|EFH65026.1| hypothetical protein ARALYDRAFT_476155 [Arabidopsis lyrata subsp. lyrata] Length = 340 Score = 74.7 bits (182), Expect = 6e-11 Identities = 38/60 (63%), Positives = 44/60 (73%), Gaps = 10/60 (16%) Frame = -2 Query: 152 ATVSDLPLKRPREVAD--NGAATSETSG--------CISSVIPGWFSEISPMWPGEAHSL 3 A+V+DLP+KRPRE + NGAA +G C+SSVIPGWFSEISPMWPGEAHSL Sbjct: 7 ASVTDLPVKRPREAEEDNNGAAMETENGGGEIKEPSCMSSVIPGWFSEISPMWPGEAHSL 66 >dbj|BAC20171.1| spermidine synthase [Malus x domestica] Length = 335 Score = 73.2 bits (178), Expect = 2e-10 Identities = 39/68 (57%), Positives = 48/68 (70%), Gaps = 11/68 (16%) Frame = -2 Query: 173 MAEQTIVATVSDLPLKRPREVADNGAATS------ETSG-----CISSVIPGWFSEISPM 27 MA++ +V + +DLPLKRPRE +NGA + ET G +S+VIPGWFSEISPM Sbjct: 1 MADEIVVGS-ADLPLKRPREEEENGAEAAASAVSMETDGGKEPDSVSAVIPGWFSEISPM 59 Query: 26 WPGEAHSL 3 WPGEAHSL Sbjct: 60 WPGEAHSL 67 >ref|NP_177188.1| Spermidine synthase 2 [Arabidopsis thaliana] gi|12644069|sp|O48661.2|SPD2_ARATH RecName: Full=Spermidine synthase 2; Short=SPDSY 2; AltName: Full=Putrescine aminopropyltransferase 2 gi|14030637|gb|AAK52993.1|AF375409_1 At1g70310/F17O7_16 [Arabidopsis thaliana] gi|3176685|gb|AAC18808.1| Strong similarity to spermidine synthase 1, gb|Y08252 and possibly closer similarity to spermidine synthase 2 gb|Y08253 from Datura stramonium. ESTs gb|N38155, gb|T41738, gb|AA597626, gb|AA712967 and gb|AA712346 come from this gene [Arabidopsis thaliana] gi|6468491|emb|CAB61615.1| spermidine synthase 2 [Arabidopsis thaliana] gi|56381993|gb|AAV85715.1| At1g70310 [Arabidopsis thaliana] gi|332196923|gb|AEE35044.1| Spermidine synthase 2 [Arabidopsis thaliana] Length = 340 Score = 73.2 bits (178), Expect = 2e-10 Identities = 36/60 (60%), Positives = 44/60 (73%), Gaps = 10/60 (16%) Frame = -2 Query: 152 ATVSDLPLKRPREVADN---GAATSETSG-------CISSVIPGWFSEISPMWPGEAHSL 3 A+V+DLP+KRPRE ++ GA +E G C+SS+IPGWFSEISPMWPGEAHSL Sbjct: 7 ASVTDLPVKRPREAEEDNNGGAMETENGGGEIKEPSCMSSIIPGWFSEISPMWPGEAHSL 66