BLASTX nr result

ID: Atractylodes22_contig00007590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00007590
         (791 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146528.1| PREDICTED: general transcription factor IIE ...   263   4e-68
ref|XP_002509755.1| Transcription initiation factor IIE subunit ...   259   6e-67
ref|XP_002283557.1| PREDICTED: general transcription factor IIE ...   255   7e-66
ref|XP_002299546.1| predicted protein [Populus trichocarpa] gi|2...   254   2e-65
ref|XP_003532609.1| PREDICTED: general transcription factor IIE ...   251   1e-64

>ref|XP_004146528.1| PREDICTED: general transcription factor IIE subunit 2-like [Cucumis
           sativus] gi|449499921|ref|XP_004160955.1| PREDICTED:
           general transcription factor IIE subunit 2-like [Cucumis
           sativus]
          Length = 277

 Score =  263 bits (671), Expect = 4e-68
 Identities = 129/179 (72%), Positives = 155/179 (86%)
 Frame = +1

Query: 253 EKCQSTLKSIAGSKTSNKTTAAAPRAVPASTLAKSPLPAVKFSNDTERLQHINNIRKSPV 432
           E+CQSTL  IA SK+ +K+T     A PA+++A+ P PAVKFSNDTERLQHIN+IRKSPV
Sbjct: 15  ERCQSTLSGIAASKSVSKSTPKFTPA-PAASIARPPAPAVKFSNDTERLQHINSIRKSPV 73

Query: 433 GAQIKRVIDLLFESRQSFTAEQINEACYVDVKGNKAVFESLAKNPKVNYEGKRFSYKSKH 612
           GAQIKRVIDLL E+RQ+FT EQINEACYVD+  NKAV++SL  NPKV+Y+G+RFSYKSKH
Sbjct: 74  GAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKVHYDGRRFSYKSKH 133

Query: 613 NVRDQKELLRLIRTFAEGIAVADLKDAYPTVMEDLQALKAARQIWLLSNFDSQEDIAYP 789
           +++D+ +LL L+R F EGIAV DLKDAYP+VMEDLQALKA+ Q+WLLSNFDSQEDIAYP
Sbjct: 134 DLKDKNQLLYLVRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLLSNFDSQEDIAYP 192


>ref|XP_002509755.1| Transcription initiation factor IIE subunit beta, putative [Ricinus
           communis] gi|223549654|gb|EEF51142.1| Transcription
           initiation factor IIE subunit beta, putative [Ricinus
           communis]
          Length = 282

 Score =  259 bits (661), Expect = 6e-67
 Identities = 129/179 (72%), Positives = 150/179 (83%)
 Frame = +1

Query: 253 EKCQSTLKSIAGSKTSNKTTAAAPRAVPASTLAKSPLPAVKFSNDTERLQHINNIRKSPV 432
           EKCQ+TL SIA    S+K +       P+  + ++P PAVKFSNDTERLQHI++IRK+PV
Sbjct: 15  EKCQTTLTSIAAKAGSHKPSITPKIVAPSPIIPRTPGPAVKFSNDTERLQHIHSIRKAPV 74

Query: 433 GAQIKRVIDLLFESRQSFTAEQINEACYVDVKGNKAVFESLAKNPKVNYEGKRFSYKSKH 612
           GAQIKRVIDLLFE+RQ+FT EQINEACYVDV  NKAVF+SL  NPKV+Y+G+ FSYKSKH
Sbjct: 75  GAQIKRVIDLLFETRQAFTPEQINEACYVDVNSNKAVFDSLRNNPKVHYDGRHFSYKSKH 134

Query: 613 NVRDQKELLRLIRTFAEGIAVADLKDAYPTVMEDLQALKAARQIWLLSNFDSQEDIAYP 789
           +++D+K+LL LIR F EGIAV DLKDAYPTVMEDLQALKAA  IWLLSNFDSQEDIAYP
Sbjct: 135 DLKDKKQLLYLIREFKEGIAVIDLKDAYPTVMEDLQALKAAGGIWLLSNFDSQEDIAYP 193


>ref|XP_002283557.1| PREDICTED: general transcription factor IIE subunit 2 [Vitis
           vinifera] gi|297742556|emb|CBI34705.3| unnamed protein
           product [Vitis vinifera]
          Length = 285

 Score =  255 bits (652), Expect = 7e-66
 Identities = 128/179 (71%), Positives = 148/179 (82%)
 Frame = +1

Query: 253 EKCQSTLKSIAGSKTSNKTTAAAPRAVPASTLAKSPLPAVKFSNDTERLQHINNIRKSPV 432
           EKCQSTL SIA    S+K T   P+    +   K P PAVKFSNDTERLQHIN+IRK+PV
Sbjct: 15  EKCQSTLTSIAAKAGSSKPTV--PQKFTPAAPTKPPTPAVKFSNDTERLQHINSIRKAPV 72

Query: 433 GAQIKRVIDLLFESRQSFTAEQINEACYVDVKGNKAVFESLAKNPKVNYEGKRFSYKSKH 612
           GAQIKRVIDLL E+RQ+FT EQINEACYVD   NKAVF+SL  NPKV+Y+GKRF+YKSKH
Sbjct: 73  GAQIKRVIDLLLETRQAFTPEQINEACYVDTNANKAVFDSLRNNPKVSYDGKRFAYKSKH 132

Query: 613 NVRDQKELLRLIRTFAEGIAVADLKDAYPTVMEDLQALKAARQIWLLSNFDSQEDIAYP 789
           +++D+ +LL L+R F EGIAV DLKD+YP+VMEDLQALKAA Q+WLLSNFDSQEDIAYP
Sbjct: 133 DLKDRSQLLVLVRKFPEGIAVIDLKDSYPSVMEDLQALKAAGQVWLLSNFDSQEDIAYP 191


>ref|XP_002299546.1| predicted protein [Populus trichocarpa] gi|222846804|gb|EEE84351.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  254 bits (648), Expect = 2e-65
 Identities = 131/184 (71%), Positives = 151/184 (82%), Gaps = 5/184 (2%)
 Frame = +1

Query: 253 EKCQSTLKSIAGSKTSN-----KTTAAAPRAVPASTLAKSPLPAVKFSNDTERLQHINNI 417
           EKCQSTL SIA S+ S      KT A AP     ST A++P PAVKFSNDTERLQHIN+I
Sbjct: 15  EKCQSTLTSIAKSRPSKSSLTQKTVAVAPAP---STSARTPAPAVKFSNDTERLQHINSI 71

Query: 418 RKSPVGAQIKRVIDLLFESRQSFTAEQINEACYVDVKGNKAVFESLAKNPKVNYEGKRFS 597
           RK+P GAQIKRVIDLL E+RQ+FT EQIN+ CYVD+  NKAVF+SL  NPKV+Y+GKRFS
Sbjct: 72  RKAPAGAQIKRVIDLLLETRQAFTPEQINDHCYVDMNSNKAVFDSLRNNPKVHYDGKRFS 131

Query: 598 YKSKHNVRDQKELLRLIRTFAEGIAVADLKDAYPTVMEDLQALKAARQIWLLSNFDSQED 777
           YKSKH+++D+ +LL LIR F EGIAV DLKD+YP+VM+DLQALKA  QIWLLSNFDSQED
Sbjct: 132 YKSKHDLKDKSQLLVLIRKFPEGIAVIDLKDSYPSVMDDLQALKAVGQIWLLSNFDSQED 191

Query: 778 IAYP 789
           IAYP
Sbjct: 192 IAYP 195


>ref|XP_003532609.1| PREDICTED: general transcription factor IIE subunit 2-like [Glycine
           max]
          Length = 280

 Score =  251 bits (642), Expect = 1e-64
 Identities = 125/179 (69%), Positives = 150/179 (83%)
 Frame = +1

Query: 253 EKCQSTLKSIAGSKTSNKTTAAAPRAVPASTLAKSPLPAVKFSNDTERLQHINNIRKSPV 432
           EKCQ+TL +IA +K +  T  +A  A   S   ++  PAVKFSNDTERLQHIN+IRK+PV
Sbjct: 15  EKCQTTLSTIAATKAAAATQKSATHA---SANGRNAAPAVKFSNDTERLQHINSIRKAPV 71

Query: 433 GAQIKRVIDLLFESRQSFTAEQINEACYVDVKGNKAVFESLAKNPKVNYEGKRFSYKSKH 612
           GAQ+KRVIDLL E+RQ+FT EQINEACYVD+K NK VFE+L KNPKVNY+G+R SYKSK+
Sbjct: 72  GAQMKRVIDLLLETRQAFTPEQINEACYVDMKANKDVFENLRKNPKVNYDGQRLSYKSKY 131

Query: 613 NVRDQKELLRLIRTFAEGIAVADLKDAYPTVMEDLQALKAARQIWLLSNFDSQEDIAYP 789
            ++D+ ELL+L+R + EG+AV DLKDAYPTVMEDLQA+KAA QIWLLSNFDSQEDIAYP
Sbjct: 132 GIKDKTELLQLVRKYPEGLAVIDLKDAYPTVMEDLQAMKAAGQIWLLSNFDSQEDIAYP 190


Top