BLASTX nr result

ID: Atractylodes22_contig00007517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00007517
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16290.3| unnamed protein product [Vitis vinifera]              117   9e-25
ref|XP_002285035.1| PREDICTED: protein transport protein Sec61 s...   117   9e-25
ref|XP_003543483.1| PREDICTED: protein transport protein Sec61 s...   115   6e-24
ref|XP_003540170.1| PREDICTED: protein transport protein Sec61 s...   115   6e-24
ref|XP_002276029.1| PREDICTED: protein transport protein Sec61 s...   114   1e-23

>emb|CBI16290.3| unnamed protein product [Vitis vinifera]
          Length = 699

 Score =  117 bits (294), Expect = 9e-25
 Identities = 58/84 (69%), Positives = 64/84 (76%)
 Frame = +2

Query: 53  RPGPVGVIPRGSPAATAGMRRRRLGTXXXXXXXXXXXXXXXXXMLRFYTDDAPGVKITPT 232
           RPGPVG+ PRG+ AATAGMRRRR+G                  MLRFYTDDAPG+KITPT
Sbjct: 609 RPGPVGMAPRGTAAATAGMRRRRVGGGSGGSSSGYGGGGSGSNMLRFYTDDAPGLKITPT 668

Query: 233 VVLVMSVCFIGFVTALHVFGKLYR 304
           VVLVMS+CFIGFVTALHVFGK+YR
Sbjct: 669 VVLVMSLCFIGFVTALHVFGKIYR 692


>ref|XP_002285035.1| PREDICTED: protein transport protein Sec61 subunit beta [Vitis
           vinifera]
          Length = 107

 Score =  117 bits (294), Expect = 9e-25
 Identities = 58/84 (69%), Positives = 64/84 (76%)
 Frame = +2

Query: 53  RPGPVGVIPRGSPAATAGMRRRRLGTXXXXXXXXXXXXXXXXXMLRFYTDDAPGVKITPT 232
           RPGPVG+ PRG+ AATAGMRRRR+G                  MLRFYTDDAPG+KITPT
Sbjct: 17  RPGPVGMAPRGTAAATAGMRRRRVGGGSGGSSSGYGGGGSGSNMLRFYTDDAPGLKITPT 76

Query: 233 VVLVMSVCFIGFVTALHVFGKLYR 304
           VVLVMS+CFIGFVTALHVFGK+YR
Sbjct: 77  VVLVMSLCFIGFVTALHVFGKIYR 100


>ref|XP_003543483.1| PREDICTED: protein transport protein Sec61 subunit beta-like
           [Glycine max]
          Length = 105

 Score =  115 bits (287), Expect = 6e-24
 Identities = 60/87 (68%), Positives = 64/87 (73%)
 Frame = +2

Query: 53  RPGPVGVIPRGSPAATAGMRRRRLGTXXXXXXXXXXXXXXXXXMLRFYTDDAPGVKITPT 232
           RPGP G+ PRGS AATAGMRRRRLG                  MLRFYTDDAPG+KI+PT
Sbjct: 17  RPGPAGMAPRGSAAATAGMRRRRLG--GGNSSASTGVGGGSSNMLRFYTDDAPGLKISPT 74

Query: 233 VVLVMSVCFIGFVTALHVFGKLYRRSS 313
           VVLVMS+CFIGFVTALHVFGKLYR  S
Sbjct: 75  VVLVMSLCFIGFVTALHVFGKLYRSKS 101


>ref|XP_003540170.1| PREDICTED: protein transport protein Sec61 subunit beta-like
           [Glycine max]
          Length = 105

 Score =  115 bits (287), Expect = 6e-24
 Identities = 60/87 (68%), Positives = 64/87 (73%)
 Frame = +2

Query: 53  RPGPVGVIPRGSPAATAGMRRRRLGTXXXXXXXXXXXXXXXXXMLRFYTDDAPGVKITPT 232
           RPGP G+ PRGS AATAGMRRRRLG                  MLRFYTDDAPG+KI+PT
Sbjct: 17  RPGPAGMAPRGSAAATAGMRRRRLG--GGNSSASTGVGGGSSNMLRFYTDDAPGLKISPT 74

Query: 233 VVLVMSVCFIGFVTALHVFGKLYRRSS 313
           VVLVMS+CFIGFVTALHVFGKLYR  S
Sbjct: 75  VVLVMSLCFIGFVTALHVFGKLYRSKS 101


>ref|XP_002276029.1| PREDICTED: protein transport protein Sec61 subunit beta [Vitis
           vinifera] gi|147800942|emb|CAN75561.1| hypothetical
           protein VITISV_032577 [Vitis vinifera]
          Length = 108

 Score =  114 bits (284), Expect = 1e-23
 Identities = 60/88 (68%), Positives = 64/88 (72%), Gaps = 1/88 (1%)
 Frame = +2

Query: 53  RPGPVGVIPRGSPAATAGMRRRRLGTXXXXXXXXXXXXXXXXX-MLRFYTDDAPGVKITP 229
           RP  VG+ PRGS AATAGMRRRRLGT                  MLRFYTDDAPG+KITP
Sbjct: 17  RPSTVGMAPRGSAAATAGMRRRRLGTGSAGGGSGGFGSGSSGSNMLRFYTDDAPGLKITP 76

Query: 230 TVVLVMSVCFIGFVTALHVFGKLYRRSS 313
           TVVLVMS+CFIGFVTALHVFGK+YR  S
Sbjct: 77  TVVLVMSLCFIGFVTALHVFGKIYRHRS 104


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