BLASTX nr result
ID: Atractylodes22_contig00007517
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes22_contig00007517 (554 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI16290.3| unnamed protein product [Vitis vinifera] 117 9e-25 ref|XP_002285035.1| PREDICTED: protein transport protein Sec61 s... 117 9e-25 ref|XP_003543483.1| PREDICTED: protein transport protein Sec61 s... 115 6e-24 ref|XP_003540170.1| PREDICTED: protein transport protein Sec61 s... 115 6e-24 ref|XP_002276029.1| PREDICTED: protein transport protein Sec61 s... 114 1e-23 >emb|CBI16290.3| unnamed protein product [Vitis vinifera] Length = 699 Score = 117 bits (294), Expect = 9e-25 Identities = 58/84 (69%), Positives = 64/84 (76%) Frame = +2 Query: 53 RPGPVGVIPRGSPAATAGMRRRRLGTXXXXXXXXXXXXXXXXXMLRFYTDDAPGVKITPT 232 RPGPVG+ PRG+ AATAGMRRRR+G MLRFYTDDAPG+KITPT Sbjct: 609 RPGPVGMAPRGTAAATAGMRRRRVGGGSGGSSSGYGGGGSGSNMLRFYTDDAPGLKITPT 668 Query: 233 VVLVMSVCFIGFVTALHVFGKLYR 304 VVLVMS+CFIGFVTALHVFGK+YR Sbjct: 669 VVLVMSLCFIGFVTALHVFGKIYR 692 >ref|XP_002285035.1| PREDICTED: protein transport protein Sec61 subunit beta [Vitis vinifera] Length = 107 Score = 117 bits (294), Expect = 9e-25 Identities = 58/84 (69%), Positives = 64/84 (76%) Frame = +2 Query: 53 RPGPVGVIPRGSPAATAGMRRRRLGTXXXXXXXXXXXXXXXXXMLRFYTDDAPGVKITPT 232 RPGPVG+ PRG+ AATAGMRRRR+G MLRFYTDDAPG+KITPT Sbjct: 17 RPGPVGMAPRGTAAATAGMRRRRVGGGSGGSSSGYGGGGSGSNMLRFYTDDAPGLKITPT 76 Query: 233 VVLVMSVCFIGFVTALHVFGKLYR 304 VVLVMS+CFIGFVTALHVFGK+YR Sbjct: 77 VVLVMSLCFIGFVTALHVFGKIYR 100 >ref|XP_003543483.1| PREDICTED: protein transport protein Sec61 subunit beta-like [Glycine max] Length = 105 Score = 115 bits (287), Expect = 6e-24 Identities = 60/87 (68%), Positives = 64/87 (73%) Frame = +2 Query: 53 RPGPVGVIPRGSPAATAGMRRRRLGTXXXXXXXXXXXXXXXXXMLRFYTDDAPGVKITPT 232 RPGP G+ PRGS AATAGMRRRRLG MLRFYTDDAPG+KI+PT Sbjct: 17 RPGPAGMAPRGSAAATAGMRRRRLG--GGNSSASTGVGGGSSNMLRFYTDDAPGLKISPT 74 Query: 233 VVLVMSVCFIGFVTALHVFGKLYRRSS 313 VVLVMS+CFIGFVTALHVFGKLYR S Sbjct: 75 VVLVMSLCFIGFVTALHVFGKLYRSKS 101 >ref|XP_003540170.1| PREDICTED: protein transport protein Sec61 subunit beta-like [Glycine max] Length = 105 Score = 115 bits (287), Expect = 6e-24 Identities = 60/87 (68%), Positives = 64/87 (73%) Frame = +2 Query: 53 RPGPVGVIPRGSPAATAGMRRRRLGTXXXXXXXXXXXXXXXXXMLRFYTDDAPGVKITPT 232 RPGP G+ PRGS AATAGMRRRRLG MLRFYTDDAPG+KI+PT Sbjct: 17 RPGPAGMAPRGSAAATAGMRRRRLG--GGNSSASTGVGGGSSNMLRFYTDDAPGLKISPT 74 Query: 233 VVLVMSVCFIGFVTALHVFGKLYRRSS 313 VVLVMS+CFIGFVTALHVFGKLYR S Sbjct: 75 VVLVMSLCFIGFVTALHVFGKLYRSKS 101 >ref|XP_002276029.1| PREDICTED: protein transport protein Sec61 subunit beta [Vitis vinifera] gi|147800942|emb|CAN75561.1| hypothetical protein VITISV_032577 [Vitis vinifera] Length = 108 Score = 114 bits (284), Expect = 1e-23 Identities = 60/88 (68%), Positives = 64/88 (72%), Gaps = 1/88 (1%) Frame = +2 Query: 53 RPGPVGVIPRGSPAATAGMRRRRLGTXXXXXXXXXXXXXXXXX-MLRFYTDDAPGVKITP 229 RP VG+ PRGS AATAGMRRRRLGT MLRFYTDDAPG+KITP Sbjct: 17 RPSTVGMAPRGSAAATAGMRRRRLGTGSAGGGSGGFGSGSSGSNMLRFYTDDAPGLKITP 76 Query: 230 TVVLVMSVCFIGFVTALHVFGKLYRRSS 313 TVVLVMS+CFIGFVTALHVFGK+YR S Sbjct: 77 TVVLVMSLCFIGFVTALHVFGKIYRHRS 104