BLASTX nr result

ID: Atractylodes22_contig00007445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00007445
         (1553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269566.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   460   e-127
emb|CBI32027.3| unnamed protein product [Vitis vinifera]              458   e-126
ref|XP_002321756.1| predicted protein [Populus trichocarpa] gi|2...   443   e-122
ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein lig...   439   e-120
ref|XP_003613573.1| RCC1 and BTB domain-containing protein [Medi...   439   e-120

>ref|XP_002269566.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
          Length = 400

 Score =  460 bits (1184), Expect = e-127
 Identities = 231/398 (58%), Positives = 283/398 (71%), Gaps = 19/398 (4%)
 Frame = +3

Query: 249  MEAMERVKDTEEKQEVWSWGAGTEGQLGTGKLQDEHIPQXXXXXXXXXXXX-----CAGA 413
            ME  ER K  E   E+WSWGAGT+GQLGT +L+DEH+PQ                 C GA
Sbjct: 1    MEENERDKGGEV--EIWSWGAGTDGQLGTTRLEDEHLPQLLDLPRFSSAGPISLLACGGA 58

Query: 414  HVVALTPGKMVLTWGRGTSGQLGHGHLVNSLEPKPVDVLKNFNIIHVSAGWNHSGFVTES 593
            HV+ALT    V+TWGRGTSGQLGHG +V+SL+PK V +L++F + HVSAGW+HSGFV+++
Sbjct: 59   HVLALTTDGKVVTWGRGTSGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHSGFVSDT 118

Query: 594  GHLYTCGDGSFGQLGLGDYRSQSCPIKVSCFEFRHVEQIACGMRHSLALMKGERGDQVYG 773
            G L+TCGDGSFGQLG GD +S   P+KVS F+ +HV+QIACGMRHSL L+K   GDQVYG
Sbjct: 119  GCLFTCGDGSFGQLGHGDCKSHCSPVKVSYFDSKHVDQIACGMRHSLVLLK---GDQVYG 175

Query: 774  FGSGKRGQLGTSNEKIKSISLPQSVSGLEEVNVSSITANGDHSAALSADGDLYTWGRGFS 953
            FGSGKRGQLG S +  +SIS+PQ+  GLE V + SI ANGDHSAALSA+G LYTWGRGF 
Sbjct: 176  FGSGKRGQLGVSMDNTRSISVPQATVGLEGVEIISIDANGDHSAALSANGHLYTWGRGFG 235

Query: 954  GSPDVCCPNRVISPVSFMQATLGWNHALVLTDEGEVLMLGGSHHGVLNKPQNLAK----- 1118
             + DV CP  + S + F Q  LGWNH LVLT  GEV MLGG+ HGVL  PQ  ++     
Sbjct: 236  STSDVHCPRCLPSSLCFTQVALGWNHMLVLTGGGEVFMLGGNRHGVLGDPQKGSQVKHLS 295

Query: 1119 ---------QDSNEAHVEKIPGLNGIKVVGIASGAEHSVLTTENGVVMTWGWGEHGQLGL 1271
                     ++S E ++EK+ GL+G+ VV IA+GAEHS L TEN V+ TWGWGEHGQLGL
Sbjct: 296  VIEVFLHGPEESREENLEKVQGLDGLNVVQIAAGAEHSALVTENRVIKTWGWGEHGQLGL 355

Query: 1272 GSTSDQTSPQVVSMGENVAHEHMASKVYCGSGFTFVVR 1385
            G+T DQ SPQ V +G  +  +H   KVYCGSGFTF ++
Sbjct: 356  GNTYDQISPQAVRLGHRLPGQHTMIKVYCGSGFTFAIK 393


>emb|CBI32027.3| unnamed protein product [Vitis vinifera]
          Length = 405

 Score =  458 bits (1178), Expect = e-126
 Identities = 231/396 (58%), Positives = 285/396 (71%), Gaps = 13/396 (3%)
 Frame = +3

Query: 237  SRSKMEAMERVKDTEEKQEVWSWGAGTEGQLGTGKLQDEHIPQXXXXXXXXXXXX----- 401
            + + ME  ER K  E   E+WSWGAGT+GQLGT +L+DEH+PQ                 
Sbjct: 5    TNTMMEENERDKGGEV--EIWSWGAGTDGQLGTTRLEDEHLPQLLDLPRFSSAGPISLLA 62

Query: 402  CAGAHVVALTPGKMVLTWGRGTSGQLGHGHLVNSLEPKPVDVLKNFNIIHVSAGWNHSGF 581
            C GAHV+ALT    V+TWGRGTSGQLGHG +V+SL+PK V +L++F + HVSAGW+HSGF
Sbjct: 63   CGGAHVLALTTDGKVVTWGRGTSGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHSGF 122

Query: 582  VTESGHLYTCGDGSFGQLGLGDYRSQSCPIKVSCFEFRHVEQIACGMRHSLALMKGE--R 755
            V+++G L+TCGDGSFGQLG GD +S   P+KVS F+ +HV+QIACGMRHSL L+KG    
Sbjct: 123  VSDTGCLFTCGDGSFGQLGHGDCKSHCSPVKVSYFDSKHVDQIACGMRHSLVLLKGTGLS 182

Query: 756  GDQVYGFGSGKRGQLGTSNEKIKSISLPQSVSGLEEVNVSSITANGDHSAALSADGDLYT 935
            GDQVYGFGSGKRGQLG S +  +SIS+PQ+  GLE V + SI ANGDHSAALSA+G LYT
Sbjct: 183  GDQVYGFGSGKRGQLGVSMDNTRSISVPQATVGLEGVEIISIDANGDHSAALSANGHLYT 242

Query: 936  WGRGFSGSPDVCCPNRVISPVSFMQATLGWNHALVLTDEGEVLMLGGSHHGVLNKPQNLA 1115
            WGRGF  + DV CP  + S + F Q  LGWNH LVLT  GEV MLGG+ HGVL  PQ  +
Sbjct: 243  WGRGFGSTSDVHCPRCLPSSLCFTQVALGWNHMLVLTGGGEVFMLGGNRHGVLGDPQKGS 302

Query: 1116 K-----QDSNEAHVEKIPGLNGIKVVGIASGAEHSVLTTEN-GVVMTWGWGEHGQLGLGS 1277
            +     ++S E ++EK+ GL+G+ VV IA+GAEHS L T N  V+ TWGWGEHGQLGLG+
Sbjct: 303  QVKHLSEESREENLEKVQGLDGLNVVQIAAGAEHSALVTGNILVIKTWGWGEHGQLGLGN 362

Query: 1278 TSDQTSPQVVSMGENVAHEHMASKVYCGSGFTFVVR 1385
            T DQ SPQ V +G  +  +H   KVYCGSGFTF ++
Sbjct: 363  TYDQISPQAVRLGHRLPGQHTMIKVYCGSGFTFAIK 398


>ref|XP_002321756.1| predicted protein [Populus trichocarpa] gi|222868752|gb|EEF05883.1|
            predicted protein [Populus trichocarpa]
          Length = 390

 Score =  443 bits (1139), Expect = e-122
 Identities = 221/390 (56%), Positives = 280/390 (71%), Gaps = 10/390 (2%)
 Frame = +3

Query: 249  MEAMERVKDTEEKQEVWSWGAGTEGQLGTGKLQDEHIPQXXXXXXXXXXXX-----CAGA 413
            ME  +R ++  ++Q++WSWGAGTEGQLGTGKL+DE++PQ                 C GA
Sbjct: 1    MEEAKRDEEESKQQQIWSWGAGTEGQLGTGKLEDEYLPQLLHLPFLSSAESISTLACGGA 60

Query: 414  HVVALTPGKMVLTWGRGTSGQLGHGHLVNSLEPKPVDVLKNFNIIHVSAGWNHSGFVTES 593
            HV+ALT G  V TWGRGT+GQLGHG ++NSL PKPV  L++  I HVSAGW+HSGFV++ 
Sbjct: 61   HVIALTSGGRVFTWGRGTTGQLGHGEMLNSLHPKPVSSLQSCVITHVSAGWSHSGFVSDI 120

Query: 594  GHLYTCGDGSFGQLGLGDYRSQSCPIKVSCFEFRHVEQIACGMRHSLALMKGERGDQVYG 773
            G L+TCGDGSFGQLG G+YRSQS P+KV  F    V QIACGMRHSL L+    G+QVYG
Sbjct: 121  GLLFTCGDGSFGQLGQGNYRSQSTPVKVDYFANNFVNQIACGMRHSLVLL---NGNQVYG 177

Query: 774  FGSGKRGQLGTSNEKIKSISLPQSVSGLEEVNVSSITANGDHSAALSADGDLYTWGRGFS 953
            FGSGKRGQLG S +K KSI+LPQ   GLE+V + SI+ANGDHSAA+SADG LYTWGRGF+
Sbjct: 178  FGSGKRGQLGISRDKTKSINLPQVTCGLEDVQIVSISANGDHSAAISADGHLYTWGRGFA 237

Query: 954  GSPDVCCPNRVISPVSFMQATLGWNHALVLTDEGEVLMLGGSHHGVLNKPQNLA-----K 1118
            G+ D   P   +S +   +A LGWNH L+LT + EVLMLGG++HGVL   + ++      
Sbjct: 238  GASDANFPQLSLSSLRCTKAALGWNHGLLLTGDEEVLMLGGNYHGVLCDLEKMSAVKHRP 297

Query: 1119 QDSNEAHVEKIPGLNGIKVVGIASGAEHSVLTTENGVVMTWGWGEHGQLGLGSTSDQTSP 1298
            +DS    + ++ GL+G+KVV IA+GAEHS L        TWGWGEHGQLGLG+T+DQT P
Sbjct: 298  EDSPGTALNEVIGLDGVKVVKIAAGAEHSAL--------TWGWGEHGQLGLGNTNDQTIP 349

Query: 1299 QVVSMGENVAHEHMASKVYCGSGFTFVVRT 1388
            Q VS+  ++ ++  +  VYCGSGFTF +R+
Sbjct: 350  QTVSLIPDIQNKEASLNVYCGSGFTFAIRS 379


>ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
            max]
          Length = 388

 Score =  439 bits (1129), Expect = e-120
 Identities = 218/375 (58%), Positives = 271/375 (72%), Gaps = 7/375 (1%)
 Frame = +3

Query: 279  EEKQEVWSWGAGTEGQLGTGKLQDEHIPQXXXXXXXXXXXX--CAGAHVVALTPGKMVLT 452
            E +Q VWSWGAGTEGQLGT  LQDEH PQ              C GAHV+ALT    VL+
Sbjct: 15   ESEQRVWSWGAGTEGQLGTKILQDEHFPQLLHQPSLSSISSLACGGAHVIALTSAGKVLS 74

Query: 453  WGRGTSGQLGHGHLV-NSLEPKPVDVLKNFNIIHVSAGWNHSGFVTESGHLYTCGDGSFG 629
            WGRG SGQLGHG +V NSL PK V  L  + I HVSAGW HSGFV+++G ++TCGDGSFG
Sbjct: 75   WGRGNSGQLGHGLVVSNSLYPKAVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCGDGSFG 134

Query: 630  QLGLGDYRSQSCPIKVSCFEFRHVEQIACGMRHSLALMKGERGDQVYGFGSGKRGQLGTS 809
            QLG GD+ S   P+KVSCF  +HVEQ+ACGMRHSL L+KG   +QVYGFGSGKRGQLG S
Sbjct: 135  QLGHGDHASHCSPVKVSCFVDQHVEQVACGMRHSLVLLKG---NQVYGFGSGKRGQLGVS 191

Query: 810  NEKIKSISLPQSVSGLEEVNVSSITANGDHSAALSADGDLYTWGRGFSGSPDVCCPNRVI 989
            N+++KS+++P+ VSG E V ++ I ANGDHSAA+S DG +YTWGRGF G  D   P  + 
Sbjct: 192  NDRVKSVNVPKVVSGFEGVEIAGIAANGDHSAAVSVDGHVYTWGRGFKGFEDARVPQCLN 251

Query: 990  SPVSFMQATLGWNHALVLTDEGEVLMLGGSHHGVLNKPQNLAKQDS----NEAHVEKIPG 1157
            S ++F +  LGWNHAL ++ EGEV MLGG+H GVL+  QN++         E ++EK+PG
Sbjct: 252  SSLNFTKVALGWNHALAMSGEGEVCMLGGNHLGVLSDLQNISPAKHLPHLREVNLEKVPG 311

Query: 1158 LNGIKVVGIASGAEHSVLTTENGVVMTWGWGEHGQLGLGSTSDQTSPQVVSMGENVAHEH 1337
            L+G K+  IA+GAEHSV+ TE+G + TWGWGEHGQLGLG T D+ SP  VS+G ++ +E 
Sbjct: 312  LDGTKITDIATGAEHSVIVTEHGEIKTWGWGEHGQLGLGDTRDRISPVTVSLGYDL-NEA 370

Query: 1338 MASKVYCGSGFTFVV 1382
             +  V+CGSGFTF V
Sbjct: 371  ASVIVFCGSGFTFAV 385



 Score = 67.8 bits (164), Expect = 8e-09
 Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 11/205 (5%)
 Frame = +3

Query: 744  KGERGDQVYGFGSGKRGQLGTSNEKIKSISLPQSVSGLEEVNVSSITANGDHSAALSADG 923
            K E   +V+ +G+G  GQLGT  + ++    PQ +      ++SS+   G H  AL++ G
Sbjct: 13   KDESEQRVWSWGAGTEGQLGT--KILQDEHFPQLLHQPSLSSISSLACGGAHVIALTSAG 70

Query: 924  DLYTWGRGFSGS-------PDVCCPNRVISPVSFM--QATLGWNHALVLTDEGEVLMLGG 1076
             + +WGRG SG         +   P  V S   +     + GW H+  ++D G V   G 
Sbjct: 71   KVLSWGRGNSGQLGHGLVVSNSLYPKAVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCGD 130

Query: 1077 SHHGVLNKPQNLAKQDSNEAHVEKIPGLNGIKVVGIASGAEHSVLTTENGVVMTWGWGEH 1256
               G L    +     ++     K+       V  +A G  HS++  +   V  +G G+ 
Sbjct: 131  GSFGQLGHGDH-----ASHCSPVKVSCFVDQHVEQVACGMRHSLVLLKGNQVYGFGSGKR 185

Query: 1257 GQLGLGS--TSDQTSPQVVSMGENV 1325
            GQLG+ +        P+VVS  E V
Sbjct: 186  GQLGVSNDRVKSVNVPKVVSGFEGV 210


>ref|XP_003613573.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
            gi|355514908|gb|AES96531.1| RCC1 and BTB
            domain-containing protein [Medicago truncatula]
          Length = 615

 Score =  439 bits (1129), Expect = e-120
 Identities = 231/416 (55%), Positives = 280/416 (67%), Gaps = 38/416 (9%)
 Frame = +3

Query: 249  MEAMERVKDTEEKQEVWSWGAGTEGQLGTGKLQDEHIPQXXXXXXXXXXXX-CAGAHVVA 425
            ME  E+VK  E+ + +WSWGAGT+GQLGTG+LQDE IPQ             C GAHV+A
Sbjct: 198  MEESEQVKIEEKIERLWSWGAGTDGQLGTGRLQDEQIPQQLSLSLPSVSSLACGGAHVIA 257

Query: 426  LTPGKM--------------------------------VLTWGRGTSGQLGHGHLVNSL- 506
            LT  +M                                VL+WGRG SGQLGHG +VN+L 
Sbjct: 258  LTSAQMEKVVRDIDLLECGFKPAILCFTFSVREFRHGKVLSWGRGNSGQLGHGEVVNNLL 317

Query: 507  EPKPVDVLKNFNIIHVSAGWNHSGFVTESGHLYTCGDGSFGQLGLGDYRSQSCPIKVSCF 686
             PK +  L N+ I HVSAGW HSGFV++SG L+TCGDGSFGQLG GDY S S PIKVS F
Sbjct: 318  YPKAITSLDNYFITHVSAGWGHSGFVSDSGCLFTCGDGSFGQLGHGDYASHSSPIKVSSF 377

Query: 687  EFRHVEQIACGMRHSLALMKGERGDQVYGFGSGKRGQLGTSNEKIKSISLPQSVSGLEEV 866
              ++V Q+ACGMRHSL L+KG   +QVYGFGSGKRGQLG S +KIKSI+LP+ +SG E+ 
Sbjct: 378  VDQNVAQVACGMRHSLVLLKGCLSNQVYGFGSGKRGQLGVSKDKIKSINLPKVISGFEDE 437

Query: 867  NVSSITANGDHSAALSADGDLYTWGRGFSGSPDVCCPNRVISPVSFMQATLGWNHALVLT 1046
             +  I+ANGDHSAALS DG LYTWGRGF G  D   P  + S   F + TLGWNHAL +T
Sbjct: 438  EIVGISANGDHSAALSVDGHLYTWGRGFKGYEDSHLPQCLNSTSKFTKVTLGWNHALAMT 497

Query: 1047 DEGEVLMLGGSHHGVLNKPQNL--AKQ--DSNEAHVEKIPGLNGIKVVGIASGAEHSVLT 1214
             EG+V MLGG+H GVL+   N   AK   DS EA++EK PGL+G K+  IA+GAEHSVL 
Sbjct: 498  GEGKVYMLGGNHLGVLSDLHNARPAKSLFDSREANLEKAPGLDGTKITDIATGAEHSVLV 557

Query: 1215 TENGVVMTWGWGEHGQLGLGSTSDQTSPQVVSMGENVAHEHMASKVYCGSGFTFVV 1382
            TENG + TWGWGEHGQLGLG   D+ SP  V++G ++ +E  + +VYCGSGFTF +
Sbjct: 558  TENGEIKTWGWGEHGQLGLGDDGDRISPVTVNLGYDL-NEAASIRVYCGSGFTFAL 612


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