BLASTX nr result

ID: Atractylodes22_contig00007355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00007355
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537683.1| PREDICTED: rab proteins geranylgeranyltransf...    98   1e-18
ref|XP_003517135.1| PREDICTED: rab proteins geranylgeranyltransf...    97   3e-18
gb|AFK46783.1| unknown [Medicago truncatula]                           84   2e-14
ref|XP_003612359.1| Rab proteins geranylgeranyltransferase compo...    84   2e-14
ref|XP_003612358.1| Rab proteins geranylgeranyltransferase compo...    84   2e-14

>ref|XP_003537683.1| PREDICTED: rab proteins geranylgeranyltransferase component A-like
           [Glycine max]
          Length = 551

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 62/162 (38%), Positives = 91/162 (56%), Gaps = 14/162 (8%)
 Frame = +3

Query: 195 RDVKLVSGQELTSHQLVIDPSFTITSPLVNS----PSESLDL---RDVSGKLAWGICISK 353
           + V+L SGQ+L SHQL++DPSF I SPL +S    PSE L +   RD+ G +A GICI++
Sbjct: 325 KGVRLASGQDLYSHQLILDPSFMIPSPLSSSPRDFPSEKLQMLGQRDIKGMVARGICITR 384

Query: 354 SSLKPTVSNCLVIHHSRCYID---LSSPAREPFSYLSL----WFVFYSLVLRDDAHEGKK 512
           SS+KP VSNC V++  R        S  A +  S L++     F+ Y   + +DA EGKK
Sbjct: 385 SSIKPDVSNCSVVYPPRSLYPEQLTSIKALQIGSNLAVCPAGTFILYFSTMCNDADEGKK 444

Query: 513 FLHAIIDGLFQYTHWAQLTAVPLIKLTVQK*NPLHFWSALFI 638
            L A ++ L          ++P ++   +   P+  WSA +I
Sbjct: 445 LLKAAMNALLTLPVSGNSESIPSVQSDSEDIKPIVLWSAFYI 486


>ref|XP_003517135.1| PREDICTED: rab proteins geranylgeranyltransferase component A-like
           [Glycine max]
          Length = 553

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 63/162 (38%), Positives = 91/162 (56%), Gaps = 14/162 (8%)
 Frame = +3

Query: 195 RDVKLVSGQELTSHQLVIDPSFTITSPLVNS----PSESLDL---RDVSGKLAWGICISK 353
           + V+L SGQ+L SHQL++DPSFTI SPL  S    PSE L +   RD+ G +A GICI++
Sbjct: 327 KGVRLASGQDLYSHQLILDPSFTIPSPLSLSLGDFPSERLQMLSQRDIKGMVARGICITR 386

Query: 354 SSLKPTVSNCLVIHHSRCYID---LSSPAREPFSYLSL----WFVFYSLVLRDDAHEGKK 512
           SS+KP VS+C V++  R        S  A +  S L++     F+ Y   L +DA EGKK
Sbjct: 387 SSIKPDVSSCSVVYPPRSLYPEQVTSIKALQIGSNLAVCPAGTFILYLSTLCNDADEGKK 446

Query: 513 FLHAIIDGLFQYTHWAQLTAVPLIKLTVQK*NPLHFWSALFI 638
            L A ++ L          ++P ++   +   P+  WSA +I
Sbjct: 447 LLKAAMNALLTLPVSGNSESIPSVQSDSEDIKPIVLWSAFYI 488


>gb|AFK46783.1| unknown [Medicago truncatula]
          Length = 552

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 60/159 (37%), Positives = 87/159 (54%), Gaps = 11/159 (6%)
 Frame = +3

Query: 195 RDVKLVSGQELTSHQLVIDPSFTITSPLVNSPSE----SLDLRDVSGKLAWGICISKSSL 362
           + V+L SGQ+L SH+L++DPSFTI S    SP +     L   D+ G +A GICI++SS+
Sbjct: 329 KGVRLSSGQDLYSHKLILDPSFTIPSTPSLSPKDFSLQMLSHVDIKGMVARGICITRSSI 388

Query: 363 KPTVSNCLVIHHSR-CYID--LSSPAREPFSYLSL----WFVFYSLVLRDDAHEGKKFLH 521
           KP VSNC V++  R  Y D   S  A +  S L++     FV Y   L +DA+EG K L 
Sbjct: 389 KPDVSNCSVVYPPRSLYPDQVTSVRALQIGSNLAVCPADTFVLYFSTLCNDANEGMKLLK 448

Query: 522 AIIDGLFQYTHWAQLTAVPLIKLTVQK*NPLHFWSALFI 638
           A ++ L          + P ++   +   P+  WSA +I
Sbjct: 449 ASMNALLTPPVSGNTESSPNVQSGSEDKKPVVLWSAFYI 487


>ref|XP_003612359.1| Rab proteins geranylgeranyltransferase component A [Medicago
           truncatula] gi|355513694|gb|AES95317.1| Rab proteins
           geranylgeranyltransferase component A [Medicago
           truncatula]
          Length = 309

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 60/159 (37%), Positives = 87/159 (54%), Gaps = 11/159 (6%)
 Frame = +3

Query: 195 RDVKLVSGQELTSHQLVIDPSFTITSPLVNSPSE----SLDLRDVSGKLAWGICISKSSL 362
           + V+L SGQ+L SH+L++DPSFTI S    SP +     L   D+ G +A GICI++SS+
Sbjct: 86  KGVRLSSGQDLYSHKLILDPSFTIPSTPSLSPKDFSLQMLSHVDIKGMVARGICITRSSI 145

Query: 363 KPTVSNCLVIHHSR-CYID--LSSPAREPFSYLSL----WFVFYSLVLRDDAHEGKKFLH 521
           KP VSNC V++  R  Y D   S  A +  S L++     FV Y   L +DA+EG K L 
Sbjct: 146 KPDVSNCSVVYPPRSLYPDQVTSVRALQIGSNLAVCPADTFVLYFSTLCNDANEGMKLLK 205

Query: 522 AIIDGLFQYTHWAQLTAVPLIKLTVQK*NPLHFWSALFI 638
           A ++ L          + P ++   +   P+  WSA +I
Sbjct: 206 ASMNALLTPPVSGNTESSPNVQSGSEDKKPVVLWSAFYI 244


>ref|XP_003612358.1| Rab proteins geranylgeranyltransferase component A [Medicago
           truncatula] gi|355513693|gb|AES95316.1| Rab proteins
           geranylgeranyltransferase component A [Medicago
           truncatula]
          Length = 552

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 60/159 (37%), Positives = 87/159 (54%), Gaps = 11/159 (6%)
 Frame = +3

Query: 195 RDVKLVSGQELTSHQLVIDPSFTITSPLVNSPSE----SLDLRDVSGKLAWGICISKSSL 362
           + V+L SGQ+L SH+L++DPSFTI S    SP +     L   D+ G +A GICI++SS+
Sbjct: 329 KGVRLSSGQDLYSHKLILDPSFTIPSTPSLSPKDFSLQMLSHVDIKGMVARGICITRSSI 388

Query: 363 KPTVSNCLVIHHSR-CYID--LSSPAREPFSYLSL----WFVFYSLVLRDDAHEGKKFLH 521
           KP VSNC V++  R  Y D   S  A +  S L++     FV Y   L +DA+EG K L 
Sbjct: 389 KPDVSNCSVVYPPRSLYPDQVTSVRALQIGSNLAVCPADTFVLYFSTLCNDANEGMKLLK 448

Query: 522 AIIDGLFQYTHWAQLTAVPLIKLTVQK*NPLHFWSALFI 638
           A ++ L          + P ++   +   P+  WSA +I
Sbjct: 449 ASMNALLTPPVSGNTESSPNVQSGSEDKKPVVLWSAFYI 487


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