BLASTX nr result

ID: Atractylodes22_contig00007316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00007316
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273844.1| PREDICTED: UPF0187 protein At3g61320, chloro...    77   1e-12
ref|XP_002511848.1| conserved hypothetical protein [Ricinus comm...    76   2e-12
ref|XP_002880204.1| hypothetical protein ARALYDRAFT_483727 [Arab...    72   5e-11
ref|NP_182111.1| Bestrophin-like protein [Arabidopsis thaliana] ...    70   2e-10
ref|XP_003529947.1| PREDICTED: UPF0187 protein At3g61320, chloro...    70   2e-10

>ref|XP_002273844.1| PREDICTED: UPF0187 protein At3g61320, chloroplastic [Vitis
           vinifera]
          Length = 419

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 42/93 (45%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
 Frame = +1

Query: 172 LKFPSKPSNIL--------CSQTPNSRSPKPLTLISILRAIPDWADGIKERRMKQSKPLY 327
           L  PSKP+ +             P   S + LTLISILR +PDWAD IKER M+Q + LY
Sbjct: 29  LPLPSKPTKLSFRVFSSRSADSPPPPSSTQNLTLISILRTVPDWADAIKERGMQQKRSLY 88

Query: 328 KHEDWVXXXXXXXXXXXXXXXFNSRVILSLVPP 426
            HE WV               F+SRVILSL+PP
Sbjct: 89  NHETWVEHRSSRRHVRHLLSSFSSRVILSLIPP 121


>ref|XP_002511848.1| conserved hypothetical protein [Ricinus communis]
           gi|223549028|gb|EEF50517.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 417

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 45/92 (48%), Positives = 52/92 (56%), Gaps = 9/92 (9%)
 Frame = +1

Query: 178 FPSKP----SNI----LCSQTP-NSRSPKPLTLISILRAIPDWADGIKERRMKQSKPLYK 330
           FPSKP    SN+    LCS+ P N      LTLIS+LRAIPDW+D IKER M+Q + LY 
Sbjct: 35  FPSKPNRKKSNLSLKTLCSKPPPNPHKTLTLTLISLLRAIPDWSDRIKERGMQQKRTLYN 94

Query: 331 HEDWVXXXXXXXXXXXXXXXFNSRVILSLVPP 426
           H  WV                 SRVILSL+PP
Sbjct: 95  HNKWVEHRSSLRHLRHLLSSLQSRVILSLIPP 126


>ref|XP_002880204.1| hypothetical protein ARALYDRAFT_483727 [Arabidopsis lyrata subsp.
           lyrata] gi|297326043|gb|EFH56463.1| hypothetical protein
           ARALYDRAFT_483727 [Arabidopsis lyrata subsp. lyrata]
          Length = 411

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 39/87 (44%), Positives = 52/87 (59%)
 Frame = +1

Query: 166 RPLKFPSKPSNILCSQTPNSRSPKPLTLISILRAIPDWADGIKERRMKQSKPLYKHEDWV 345
           + L F   PS  L S + +  SP    LIS+L+A+P+W+DGIKERRM+Q + LY HE+WV
Sbjct: 33  KSLHFKFNPS-CLSSGSKSDDSPLSEKLISLLKAVPNWSDGIKERRMEQKRSLYTHENWV 91

Query: 346 XXXXXXXXXXXXXXXFNSRVILSLVPP 426
                           +SRVILSL+PP
Sbjct: 92  RHRSSLRHLRHVSSSPSSRVILSLIPP 118


>ref|NP_182111.1| Bestrophin-like protein [Arabidopsis thaliana]
           gi|20140947|sp|O80832.1|YU87_ARATH RecName: Full=UPF0187
           protein At2g45870, chloroplastic; Flags: Precursor
           gi|3386607|gb|AAC28537.1| hypothetical protein
           [Arabidopsis thaliana] gi|18491251|gb|AAL69450.1|
           At2g45870/F4I18.15 [Arabidopsis thaliana]
           gi|330255518|gb|AEC10612.1| Bestrophin-like protein
           [Arabidopsis thaliana]
          Length = 410

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 40/88 (45%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
 Frame = +1

Query: 166 RPLKFPSKPSNILCSQTPNSR-SPKPLTLISILRAIPDWADGIKERRMKQSKPLYKHEDW 342
           + L F   PS +  S  P S  SP    LIS+L+A+P+W+DGIKERRM+Q + LY HE+W
Sbjct: 33  KSLHFKFNPSCV--SSGPKSDDSPLSEKLISLLKAVPNWSDGIKERRMQQKRSLYTHENW 90

Query: 343 VXXXXXXXXXXXXXXXFNSRVILSLVPP 426
           V                +SRVILSL+PP
Sbjct: 91  VRHRSSLRHLRHVSSSPSSRVILSLIPP 118


>ref|XP_003529947.1| PREDICTED: UPF0187 protein At3g61320, chloroplastic-like [Glycine
           max]
          Length = 413

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 36/80 (45%), Positives = 46/80 (57%)
 Frame = +1

Query: 187 KPSNILCSQTPNSRSPKPLTLISILRAIPDWADGIKERRMKQSKPLYKHEDWVXXXXXXX 366
           KP  IL S  P   S    TLIS+LR+IPDWAD ++ER M++ + LY H++W        
Sbjct: 41  KPLTILASFPPGPTSGPAQTLISLLRSIPDWADAVQERGMQKKRALYTHQNWRDHRSSLR 100

Query: 367 XXXXXXXXFNSRVILSLVPP 426
                    +SRVILSLVPP
Sbjct: 101 HLRHVFSSLSSRVILSLVPP 120


Top