BLASTX nr result
ID: Atractylodes22_contig00007252
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00007252
(1212 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containi... 298 2e-78
gb|AGG38110.1| maternal effect embryo arrest 40 protein [Dimocar... 290 4e-76
ref|XP_002531339.1| pentatricopeptide repeat-containing protein,... 283 6e-74
ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containi... 272 1e-70
ref|NP_190938.1| pentatricopeptide repeat-containing protein [Ar... 253 5e-65
>ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 298 bits (763), Expect = 2e-78
Identities = 160/278 (57%), Positives = 195/278 (70%), Gaps = 21/278 (7%)
Frame = -2
Query: 773 MAFSSCLSCDPWTLRQNLKYP----SLFFTPTKLSNVVSFASTKHYEQLTSLPS------ 624
MAFSSCL PWT L P S S ++SF ST H++Q PS
Sbjct: 1 MAFSSCLKWYPWTPPHTLTQPPPTLSSAHNCKPFSKLISFTSTHHHDQQAVSPSFSTLSP 60
Query: 623 -----------EKEVLDILHREKDEHSVLNVFKWALKQPSFEPSLSIYEEMLRKLGQVGS 477
K++ D L R+ DE S+L++ WA KQP+F PS IYEE+LRKLG+ GS
Sbjct: 61 SPTTQLPQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGS 120
Query: 476 VDSIRGVLDEMKRSSCKVSEGTFFILIESFAKFDLYDEAVCVLFIMEEEFRVKPGTYTYN 297
S+R VL EMK + C++ GTF ILIES+AKF+L+DEAV V+ IMEEEF +K +TYN
Sbjct: 121 FGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYN 180
Query: 296 FLLNVLVDGNKLKLVEDVHSLMSSKGVKRDVATFNILIKALCKAHQMRPAILMMEEMPSH 117
FLLNVLVDGNKLKLVE V+S M S+G+K DV TFNILIKALC+AHQ+RPAILMMEEM S+
Sbjct: 181 FLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSY 240
Query: 116 GLMPDEKTYTTLMHGFIEQGDLMGALRIREEMVSAQCP 3
GL PDEKT+TTLM GFIE+G++ GALRIRE+MV+A CP
Sbjct: 241 GLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCP 278
Score = 87.8 bits (216), Expect = 5e-15
Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 2/184 (1%)
Frame = -2
Query: 551 LKQPSFEPSLSIYEEMLRKLGQVGSVDSIRGVLDEMKRSSCKVSEGTFFILIESFAKFDL 372
+ F P + ++ L ++G V +LD M + T+ LI K
Sbjct: 307 MSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGE 366
Query: 371 YDEAVCVL--FIMEEEFRVKPGTYTYNFLLNVLVDGNKLKLVEDVHSLMSSKGVKRDVAT 198
+EAV +L I+ + P T TYN L++ L N+++ ++ +++SKG+ DV T
Sbjct: 367 VEEAVEILNQMILRD---FSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 423
Query: 197 FNILIKALCKAHQMRPAILMMEEMPSHGLMPDEKTYTTLMHGFIEQGDLMGALRIREEMV 18
FN LI+ LC + R A+ + EEM + G PDE TY L+ +G L AL + +EM
Sbjct: 424 FNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEME 483
Query: 17 SAQC 6
S+ C
Sbjct: 484 SSGC 487
Score = 84.0 bits (206), Expect = 7e-14
Identities = 50/175 (28%), Positives = 85/175 (48%)
Frame = -2
Query: 530 PSLSIYEEMLRKLGQVGSVDSIRGVLDEMKRSSCKVSEGTFFILIESFAKFDLYDEAVCV 351
P + + +++ L + + +EMK C E T+ +LI+S +EA+ +
Sbjct: 419 PDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSL 478
Query: 350 LFIMEEEFRVKPGTYTYNFLLNVLVDGNKLKLVEDVHSLMSSKGVKRDVATFNILIKALC 171
L ME TYN L++ +++ E++ M +G+ R+V T+N LI LC
Sbjct: 479 LKEMESS-GCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLC 537
Query: 170 KAHQMRPAILMMEEMPSHGLMPDEKTYTTLMHGFIEQGDLMGALRIREEMVSAQC 6
K ++ A +M++M GL PD+ TY +L+ F GD+ A I + M S C
Sbjct: 538 KNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGC 592
Score = 72.8 bits (177), Expect = 2e-10
Identities = 47/175 (26%), Positives = 87/175 (49%)
Frame = -2
Query: 545 QPSFEPSLSIYEEMLRKLGQVGSVDSIRGVLDEMKRSSCKVSEGTFFILIESFAKFDLYD 366
Q F+P + Y ++ L ++G V+ +L++M + T+ LI + K + +
Sbjct: 344 QEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVE 403
Query: 365 EAVCVLFIMEEEFRVKPGTYTYNFLLNVLVDGNKLKLVEDVHSLMSSKGVKRDVATFNIL 186
EA + ++ + + P T+N L+ L N +L ++ M +KG D T+N+L
Sbjct: 404 EATELARVLTSK-GILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNML 462
Query: 185 IKALCKAHQMRPAILMMEEMPSHGLMPDEKTYTTLMHGFIEQGDLMGALRIREEM 21
I +LC ++ A+ +++EM S G + TY TL+ GF + + A I +EM
Sbjct: 463 IDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEM 517
Score = 68.9 bits (167), Expect = 2e-09
Identities = 47/173 (27%), Positives = 82/173 (47%)
Frame = -2
Query: 551 LKQPSFEPSLSIYEEMLRKLGQVGSVDSIRGVLDEMKRSSCKVSEGTFFILIESFAKFDL 372
+K P Y ++ L G ++ +L EM+ S C + T+ LI+ F K
Sbjct: 447 MKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKR 506
Query: 371 YDEAVCVLFIMEEEFRVKPGTYTYNFLLNVLVDGNKLKLVEDVHSLMSSKGVKRDVATFN 192
+EA + ME + + TYN L++ L +++ + M +G+K D T+N
Sbjct: 507 IEEAEEIFDEMELQ-GISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYN 565
Query: 191 ILIKALCKAHQMRPAILMMEEMPSHGLMPDEKTYTTLMHGFIEQGDLMGALRI 33
L+ C+A ++ A +++ M S+G PD TY TL+ G + G + A R+
Sbjct: 566 SLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRL 618
Score = 61.2 bits (147), Expect = 5e-07
Identities = 46/176 (26%), Positives = 87/176 (49%), Gaps = 4/176 (2%)
Frame = -2
Query: 533 EPSLSIYEEMLRKLGQVGSVDSIRGVLDEMKRSSCKVSEGTFFILIESFAKFDLYDEAVC 354
+P ++ + +++ L + + +++EM E TF L++ F + + A+
Sbjct: 208 KPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALR 267
Query: 353 VLFIMEEEFRVKPGTYTYNFLLNVLVDGN-KLKLVEDVHSL---MSSKGVKRDVATFNIL 186
+ E V G + N +NVLV G K +E+V S MS++G + D TFN L
Sbjct: 268 I-----REQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSL 322
Query: 185 IKALCKAHQMRPAILMMEEMPSHGLMPDEKTYTTLMHGFIEQGDLMGALRIREEMV 18
+ LC+ ++ A+ +++ M G PD TY +L+ G + G++ A+ I +M+
Sbjct: 323 VNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMI 378
>gb|AGG38110.1| maternal effect embryo arrest 40 protein [Dimocarpus longan]
Length = 763
Score = 290 bits (743), Expect = 4e-76
Identities = 152/268 (56%), Positives = 194/268 (72%), Gaps = 12/268 (4%)
Frame = -2
Query: 773 MAFSSCLSCDPWTLRQNLKYPSLFFTPTKLSNV-VSFASTKHYE-----------QLTSL 630
M+ SSCL PW Q + SL PT + +SFAST+H++ QL
Sbjct: 1 MSLSSCLKLYPWPPPQ--PFLSLPRKPTTTTTTTISFASTQHHDLQQLSVSASSYQLPPN 58
Query: 629 PSEKEVLDILHREKDEHSVLNVFKWALKQPSFEPSLSIYEEMLRKLGQVGSVDSIRGVLD 450
+ + LD + R+ DE S L +F WA KQP++ P+LS+YEE+L KLG+VGS DS+ +L
Sbjct: 59 FTSSQHLDTIRRQHDETSALRLFSWASKQPNYTPTLSVYEELLAKLGKVGSFDSMTEILQ 118
Query: 449 EMKRSSCKVSEGTFFILIESFAKFDLYDEAVCVLFIMEEEFRVKPGTYTYNFLLNVLVDG 270
E+K + C+++ GTF I IES+AKF+LYDE + V IMEEEF ++P T+ YNFLLNVLVDG
Sbjct: 119 EIKAAGCQINRGTFLIFIESYAKFELYDEIITVTRIMEEEFGLEPDTHFYNFLLNVLVDG 178
Query: 269 NKLKLVEDVHSLMSSKGVKRDVATFNILIKALCKAHQMRPAILMMEEMPSHGLMPDEKTY 90
NKLKLVE HS M S+G+K D +TFNILIKALC+AHQ+RPAILMMEEMPS+GL+P+EKT+
Sbjct: 179 NKLKLVETAHSDMVSRGIKPDASTFNILIKALCRAHQIRPAILMMEEMPSYGLVPNEKTF 238
Query: 89 TTLMHGFIEQGDLMGALRIREEMVSAQC 6
TTLM GFIE+GDL GALRIRE+MV C
Sbjct: 239 TTLMQGFIEEGDLDGALRIREQMVENGC 266
Score = 94.4 bits (233), Expect = 5e-17
Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 2/180 (1%)
Frame = -2
Query: 536 FEPSLSIYEEMLRKLGQVGSVDSIRGVLDEMKRSSCKVSEGTFFILIESFAKFDLYDEAV 357
F P + ++ L + G V V+D M ++ T+ LI F K +EAV
Sbjct: 301 FYPDQFTFNTLVNGLCKTGHVKQALEVMDVMLQAGFDPDVFTYNSLISGFCKLGEVEEAV 360
Query: 356 CVL--FIMEEEFRVKPGTYTYNFLLNVLVDGNKLKLVEDVHSLMSSKGVKRDVATFNILI 183
+L I+ + P T TYN L++ L N+++ ++ ++SKG+ DV TFN LI
Sbjct: 361 EILDQMILRD---CSPNTVTYNTLISTLCKENQIEEATELARALTSKGILPDVCTFNSLI 417
Query: 182 KALCKAHQMRPAILMMEEMPSHGLMPDEKTYTTLMHGFIEQGDLMGALRIREEMVSAQCP 3
+ LC + A+ + EEM + G PDE TY L+ +G + ALR+ +EM S+ CP
Sbjct: 418 QGLCLTRNFKAAMKLFEEMKNKGCQPDEFTYNMLIDSLCSRGKVEEALRLLKEMESSGCP 477
Score = 82.4 bits (202), Expect = 2e-13
Identities = 51/183 (27%), Positives = 89/183 (48%)
Frame = -2
Query: 554 ALKQPSFEPSLSIYEEMLRKLGQVGSVDSIRGVLDEMKRSSCKVSEGTFFILIESFAKFD 375
AL P + + +++ L + + + +EMK C+ E T+ +LI+S
Sbjct: 400 ALTSKGILPDVCTFNSLIQGLCLTRNFKAAMKLFEEMKNKGCQPDEFTYNMLIDSLCSRG 459
Query: 374 LYDEAVCVLFIMEEEFRVKPGTYTYNFLLNVLVDGNKLKLVEDVHSLMSSKGVKRDVATF 195
+EA+ +L ME + TYN L+ L K++ E++ M +G+ R+ T+
Sbjct: 460 KVEEALRLLKEMESSGCPR-NVVTYNTLIAGLCKIKKIEDAEEIFDEMELQGISRNSVTY 518
Query: 194 NILIKALCKAHQMRPAILMMEEMPSHGLMPDEKTYTTLMHGFIEQGDLMGALRIREEMVS 15
N LI LCK+ ++ A +M++M GL PD+ TY +L+ + GD+ A I + M
Sbjct: 519 NTLIDGLCKSRRLEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRSGDIKRAADIVQTMTL 578
Query: 14 AQC 6
C
Sbjct: 579 DGC 581
Score = 68.9 bits (167), Expect = 2e-09
Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 4/180 (2%)
Frame = -2
Query: 533 EPSLSIYEEMLRKLGQVGSVDSIRGVLDEMKRSSCKVSEGTFFILIESFAKFDLYDEAVC 354
+P S + +++ L + + +++EM +E TF L++ F + D A+
Sbjct: 197 KPDASTFNILIKALCRAHQIRPAILMMEEMPSYGLVPNEKTFTTLMQGFIEEGDLDGALR 256
Query: 353 VLFIMEEEFRVKPGTYTYNFLLNVLVDGN-KLKLVEDVHSLM---SSKGVKRDVATFNIL 186
+ E V+ G N +NVLV G K +ED S + +S+G D TFN L
Sbjct: 257 I-----REQMVENGCEATNVTVNVLVHGFCKEGRIEDALSFIQEVASEGFYPDQFTFNTL 311
Query: 185 IKALCKAHQMRPAILMMEEMPSHGLMPDEKTYTTLMHGFIEQGDLMGALRIREEMVSAQC 6
+ LCK ++ A+ +M+ M G PD TY +L+ GF + G++ A+ I ++M+ C
Sbjct: 312 VNGLCKTGHVKQALEVMDVMLQAGFDPDVFTYNSLISGFCKLGEVEEAVEILDQMILRDC 371
Score = 60.5 bits (145), Expect = 8e-07
Identities = 38/165 (23%), Positives = 74/165 (44%)
Frame = -2
Query: 515 YEEMLRKLGQVGSVDSIRGVLDEMKRSSCKVSEGTFFILIESFAKFDLYDEAVCVLFIME 336
Y ++ L ++ ++ + DEM+ + T+ LI+ K ++A ++ M
Sbjct: 483 YNTLIAGLCKIKKIEDAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRLEDAAQLMDQMI 542
Query: 335 EEFRVKPGTYTYNFLLNVLVDGNKLKLVEDVHSLMSSKGVKRDVATFNILIKALCKAHQM 156
E +KP +TYN LL +K D+ M+ G + D+ T+ LI LCKA ++
Sbjct: 543 ME-GLKPDKFTYNSLLTYYCRSGDIKRAADIVQTMTLDGCEPDIVTYGTLIGGLCKAGRV 601
Query: 155 RPAILMMEEMPSHGLMPDEKTYTTLMHGFIEQGDLMGALRIREEM 21
A ++ + G++ Y ++ ++ A+R+ EM
Sbjct: 602 EVASRLLRTIQIQGMVLTPHAYNPVIQALFKRKRTSEAMRLFREM 646
>ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223529061|gb|EEF31046.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 630
Score = 283 bits (724), Expect = 6e-74
Identities = 144/260 (55%), Positives = 191/260 (73%), Gaps = 3/260 (1%)
Frame = -2
Query: 773 MAFS--SCLSCDPWTLRQNLKYPSLFFTPTKLSNVVSFASTK-HYEQLTSLPSEKEVLDI 603
MAFS +CL C P + P FF ++ +SFAST+ H L+S + ++LD
Sbjct: 1 MAFSFFTCLKCYPLFFPSHQHPPFSFFHKPISNSTLSFASTQQHTATLSSNFTPAQLLDT 60
Query: 602 LHREKDEHSVLNVFKWALKQPSFEPSLSIYEEMLRKLGQVGSVDSIRGVLDEMKRSSCKV 423
L R+ DE + L + WA KQP+F P+ SIYEE+LRKLG+VGS +S++ +L EMK C++
Sbjct: 61 LRRQNDETAALRLLSWASKQPNFRPNSSIYEEILRKLGKVGSFNSMKDILQEMKGLDCQI 120
Query: 422 SEGTFFILIESFAKFDLYDEAVCVLFIMEEEFRVKPGTYTYNFLLNVLVDGNKLKLVEDV 243
G I I+S+AKF+LY+E +C++ +ME EF + T YNFLLNVLVDGNKLKLVE+V
Sbjct: 121 DRGVLLIFIDSYAKFELYEEILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENV 180
Query: 242 HSLMSSKGVKRDVATFNILIKALCKAHQMRPAILMMEEMPSHGLMPDEKTYTTLMHGFIE 63
HS M SKG+K DV+TFNILIKALCKAHQ+RPAIL+MEEM S+GL+PDEKT+TTLM GFIE
Sbjct: 181 HSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIE 240
Query: 62 QGDLMGALRIREEMVSAQCP 3
+G++ GA R++E+M+ A CP
Sbjct: 241 EGNMDGAFRVKEQMLDAGCP 260
Score = 85.1 bits (209), Expect = 3e-14
Identities = 53/181 (29%), Positives = 93/181 (51%)
Frame = -2
Query: 548 KQPSFEPSLSIYEEMLRKLGQVGSVDSIRGVLDEMKRSSCKVSEGTFFILIESFAKFDLY 369
K+ E +LS +EM + +++ + +EMK C+ E T+ +LI+S
Sbjct: 275 KEGRIEEALSFIDEMSNEGKHTMAIE----LYNEMKNKGCQPDEFTYNMLIDSLCYRGKL 330
Query: 368 DEAVCVLFIMEEEFRVKPGTYTYNFLLNVLVDGNKLKLVEDVHSLMSSKGVKRDVATFNI 189
EA+ +L ME + TYN L++ K++ E++ M +G+ R+ T+N
Sbjct: 331 QEALGLLREMEISGCAR-NVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNT 389
Query: 188 LIKALCKAHQMRPAILMMEEMPSHGLMPDEKTYTTLMHGFIEQGDLMGALRIREEMVSAQ 9
LI LCK+ +++ A +M++M GL PD+ TY +++ F +GD+ A I + M S
Sbjct: 390 LIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNG 449
Query: 8 C 6
C
Sbjct: 450 C 450
>ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 272 bits (695), Expect = 1e-70
Identities = 143/275 (52%), Positives = 185/275 (67%), Gaps = 18/275 (6%)
Frame = -2
Query: 773 MAFSSCLSCDPWTLRQNLKYPSLFFTPTKLSNVVSFASTKHYEQLTSLPSE--------- 621
MAF+ C+ C PW+L + L F+ +SN F S +QL S S
Sbjct: 1 MAFT-CVKCYPWSL----PHAPLSFSSKPISNSSIFFSASLSDQLASSSSSNSTSSSHIV 55
Query: 620 ---------KEVLDILHREKDEHSVLNVFKWALKQPSFEPSLSIYEEMLRKLGQVGSVDS 468
K++++ L R+ DE + L VF WA KQP+F PS S+YEE+LRKLG+ GS +
Sbjct: 56 HHLPPDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEY 115
Query: 467 IRGVLDEMKRSSCKVSEGTFFILIESFAKFDLYDEAVCVLFIMEEEFRVKPGTYTYNFLL 288
+R VL+EMK S C+ G F I +ES+ KF+LYDE V ++ +ME+E+R+KP T YN LL
Sbjct: 116 MRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLL 175
Query: 287 NVLVDGNKLKLVEDVHSLMSSKGVKRDVATFNILIKALCKAHQMRPAILMMEEMPSHGLM 108
NVLVD NKLKLVE HS M + ++ DV+TFNILIKALCKAHQ+RPAILMMEEMPS+GL
Sbjct: 176 NVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLS 235
Query: 107 PDEKTYTTLMHGFIEQGDLMGALRIREEMVSAQCP 3
PDE T+TT+M G+IE G+L GALRI+E+MV CP
Sbjct: 236 PDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCP 270
Score = 85.9 bits (211), Expect = 2e-14
Identities = 51/175 (29%), Positives = 89/175 (50%)
Frame = -2
Query: 530 PSLSIYEEMLRKLGQVGSVDSIRGVLDEMKRSSCKVSEGTFFILIESFAKFDLYDEAVCV 351
P + + +++ L + S + +EMK C+ E T+ +LI+S +EA+ +
Sbjct: 411 PDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNL 470
Query: 350 LFIMEEEFRVKPGTYTYNFLLNVLVDGNKLKLVEDVHSLMSSKGVKRDVATFNILIKALC 171
L ME + YN L++ +++ E++ M +GV RD T+N LI LC
Sbjct: 471 LKEMELNGCAR-NVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLC 529
Query: 170 KAHQMRPAILMMEEMPSHGLMPDEKTYTTLMHGFIEQGDLMGALRIREEMVSAQC 6
K+ ++ A +M++M GL PD+ TY +L+ F + GD+ A I + M S+ C
Sbjct: 530 KSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGC 584
Score = 79.3 bits (194), Expect = 2e-12
Identities = 53/177 (29%), Positives = 79/177 (44%)
Frame = -2
Query: 536 FEPSLSIYEEMLRKLGQVGSVDSIRGVLDEMKRSSCKVSEGTFFILIESFAKFDLYDEAV 357
F P Y ++ L ++G V+D M T+ LI K +EAV
Sbjct: 304 FRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAV 363
Query: 356 CVLFIMEEEFRVKPGTYTYNFLLNVLVDGNKLKLVEDVHSLMSSKGVKRDVATFNILIKA 177
+L M P TYN +++ L N++ ++ L++SKG+ DV TFN LI+
Sbjct: 364 KILDQMVSR-DCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQG 422
Query: 176 LCKAHQMRPAILMMEEMPSHGLMPDEKTYTTLMHGFIEQGDLMGALRIREEMVSAQC 6
LC + + A+ + EEM G PDE TY L+ L AL + +EM C
Sbjct: 423 LCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGC 479
Score = 75.9 bits (185), Expect = 2e-11
Identities = 45/171 (26%), Positives = 85/171 (49%)
Frame = -2
Query: 533 EPSLSIYEEMLRKLGQVGSVDSIRGVLDEMKRSSCKVSEGTFFILIESFAKFDLYDEAVC 354
+P + Y ++ L ++G ++ +LD+M C + T+ +I S K + DEA
Sbjct: 340 DPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATE 399
Query: 353 VLFIMEEEFRVKPGTYTYNFLLNVLVDGNKLKLVEDVHSLMSSKGVKRDVATFNILIKAL 174
+ ++ + + P T+N L+ L + K D+ M KG + D T+N+LI +L
Sbjct: 400 IARLLTSK-GILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSL 458
Query: 173 CKAHQMRPAILMMEEMPSHGLMPDEKTYTTLMHGFIEQGDLMGALRIREEM 21
C + ++ A+ +++EM +G + Y TL+ GF + + A I +EM
Sbjct: 459 CSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEM 509
Score = 63.5 bits (153), Expect = 1e-07
Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 3/185 (1%)
Frame = -2
Query: 578 SVLNVFKWALKQPSFEPSLSIYEEMLRKLGQVGSVDSIRGVLDEMKRSSCKVSEGTFFIL 399
S +++F+ +K P Y ++ L ++ +L EM+ + C + + L
Sbjct: 431 SAMDLFE-EMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTL 489
Query: 398 IESFAKFDLYDEAVCVLFIMEEEFRVKPGTYTYNFLLNVLVDGNKLKLVEDVHSLMSS-- 225
I+ F K +EA + ME + V + TYN L++ L K K VED LM
Sbjct: 490 IDGFCKNKRIEEAEEIFDEMELQ-GVSRDSVTYNTLIDGLC---KSKRVEDAAQLMDQMI 545
Query: 224 -KGVKRDVATFNILIKALCKAHQMRPAILMMEEMPSHGLMPDEKTYTTLMHGFIEQGDLM 48
+G++ D T+N L+ CK ++ A +++ M S G PD TY TL+ G + G +
Sbjct: 546 MEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQ 605
Query: 47 GALRI 33
A R+
Sbjct: 606 VASRL 610
Score = 59.7 bits (143), Expect = 1e-06
Identities = 45/177 (25%), Positives = 88/177 (49%), Gaps = 4/177 (2%)
Frame = -2
Query: 524 LSIYEEMLRKLGQVGSVDSIRGVLDEMKRSSCKVSEGTFFILIESFAKFDLYDEAVCVLF 345
+S + +++ L + V +++EM E TF +++ + + D A+ +
Sbjct: 203 VSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRI-- 260
Query: 344 IMEEEFRVKPGTYTYNFLLNVLVDGN-KLKLVEDVHSLMS---SKGVKRDVATFNILIKA 177
+E V+ G + +NVL++G K ++ S + S+G + D T+N L+
Sbjct: 261 ---KEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNG 317
Query: 176 LCKAHQMRPAILMMEEMPSHGLMPDEKTYTTLMHGFIEQGDLMGALRIREEMVSAQC 6
LCK + A+ +++ M GL PD TY +L+ G + G++ A++I ++MVS C
Sbjct: 318 LCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDC 374
>ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis
thaliana] gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400
[Arabidopsis thaliana] gi|332645608|gb|AEE79129.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 754
Score = 253 bits (647), Expect = 5e-65
Identities = 133/258 (51%), Positives = 187/258 (72%), Gaps = 2/258 (0%)
Frame = -2
Query: 773 MAFSSCLSCDPWTLRQ--NLKYPSLFFTPTKLSNVVSFASTKHYEQLTSLPSEKEVLDIL 600
MAFSSCL P+++ Q L + S T S+ +SFAS H L+S ++ ++LD L
Sbjct: 1 MAFSSCLKFYPFSISQAVTLTHHSFSLNLTPPSSTISFASP-HSAALSS--TDVKLLDSL 57
Query: 599 HREKDEHSVLNVFKWALKQPSFEPSLSIYEEMLRKLGQVGSVDSIRGVLDEMKRSSCKVS 420
+ D+ + L +F A K+P+F P ++YEE+L +LG+ GS D ++ +L++MK S C++
Sbjct: 58 RSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMG 117
Query: 419 EGTFFILIESFAKFDLYDEAVCVLFIMEEEFRVKPGTYTYNFLLNVLVDGNKLKLVEDVH 240
TF ILIES+A+F+L DE + V+ M +EF +KP T+ YN +LN+LVDGN LKLVE H
Sbjct: 118 TSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISH 177
Query: 239 SLMSSKGVKRDVATFNILIKALCKAHQMRPAILMMEEMPSHGLMPDEKTYTTLMHGFIEQ 60
+ MS G+K DV+TFN+LIKALC+AHQ+RPAILM+E+MPS+GL+PDEKT+TT+M G+IE+
Sbjct: 178 AKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEE 237
Query: 59 GDLMGALRIREEMVSAQC 6
GDL GALRIRE+MV C
Sbjct: 238 GDLDGALRIREQMVEFGC 255
Score = 84.0 bits (206), Expect = 7e-14
Identities = 59/197 (29%), Positives = 90/197 (45%)
Frame = -2
Query: 596 REKDEHSVLNVFKWALKQPSFEPSLSIYEEMLRKLGQVGSVDSIRGVLDEMKRSSCKVSE 417
+E LN + Q F P + ++ L + G V ++D M +
Sbjct: 271 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV 330
Query: 416 GTFFILIESFAKFDLYDEAVCVLFIMEEEFRVKPGTYTYNFLLNVLVDGNKLKLVEDVHS 237
T+ +I K EAV VL M P T TYN L++ L N+++ ++
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEVLDQMITR-DCSPNTVTYNTLISTLCKENQVEEATELAR 389
Query: 236 LMSSKGVKRDVATFNILIKALCKAHQMRPAILMMEEMPSHGLMPDEKTYTTLMHGFIEQG 57
+++SKG+ DV TFN LI+ LC R A+ + EEM S G PDE TY L+ +G
Sbjct: 390 VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKG 449
Query: 56 DLMGALRIREEMVSAQC 6
L AL + ++M + C
Sbjct: 450 KLDEALNMLKQMELSGC 466
Score = 82.4 bits (202), Expect = 2e-13
Identities = 49/151 (32%), Positives = 77/151 (50%)
Frame = -2
Query: 458 VLDEMKRSSCKVSEGTFFILIESFAKFDLYDEAVCVLFIMEEEFRVKPGTYTYNFLLNVL 279
+ +EM+ C+ E T+ +LI+S DEA+ +L ME + TYN L++
Sbjct: 422 LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR-SVITYNTLIDGF 480
Query: 278 VDGNKLKLVEDVHSLMSSKGVKRDVATFNILIKALCKAHQMRPAILMMEEMPSHGLMPDE 99
NK + E++ M GV R+ T+N LI LCK+ ++ A +M++M G PD+
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540
Query: 98 KTYTTLMHGFIEQGDLMGALRIREEMVSAQC 6
TY +L+ F GD+ A I + M S C
Sbjct: 541 YTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571
Score = 71.2 bits (173), Expect = 5e-10
Identities = 47/175 (26%), Positives = 84/175 (48%)
Frame = -2
Query: 545 QPSFEPSLSIYEEMLRKLGQVGSVDSIRGVLDEMKRSSCKVSEGTFFILIESFAKFDLYD 366
Q ++P + Y ++ L ++G V VLD+M C + T+ LI + K + +
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVE 382
Query: 365 EAVCVLFIMEEEFRVKPGTYTYNFLLNVLVDGNKLKLVEDVHSLMSSKGVKRDVATFNIL 186
EA + ++ + + P T+N L+ L ++ ++ M SKG + D T+N+L
Sbjct: 383 EATELARVLTSK-GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNML 441
Query: 185 IKALCKAHQMRPAILMMEEMPSHGLMPDEKTYTTLMHGFIEQGDLMGALRIREEM 21
I +LC ++ A+ M+++M G TY TL+ GF + A I +EM
Sbjct: 442 IDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496
Score = 67.0 bits (162), Expect = 9e-09
Identities = 46/165 (27%), Positives = 77/165 (46%)
Frame = -2
Query: 551 LKQPSFEPSLSIYEEMLRKLGQVGSVDSIRGVLDEMKRSSCKVSEGTFFILIESFAKFDL 372
++ EP Y ++ L G +D +L +M+ S C S T+ LI+ F K +
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Query: 371 YDEAVCVLFIMEEEFRVKPGTYTYNFLLNVLVDGNKLKLVEDVHSLMSSKGVKRDVATFN 192
EA + ME V + TYN L++ L +++ + M +G K D T+N
Sbjct: 486 TREAEEIFDEMEVH-GVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYN 544
Query: 191 ILIKALCKAHQMRPAILMMEEMPSHGLMPDEKTYTTLMHGFIEQG 57
L+ C+ ++ A +++ M S+G PD TY TL+ G + G
Sbjct: 545 SLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Score = 65.9 bits (159), Expect = 2e-08
Identities = 37/172 (21%), Positives = 80/172 (46%)
Frame = -2
Query: 530 PSLSIYEEMLRKLGQVGSVDSIRGVLDEMKRSSCKVSEGTFFILIESFAKFDLYDEAVCV 351
P + +++ + G +D + ++M C S + +++ F K ++A+
Sbjct: 222 PDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNF 281
Query: 350 LFIMEEEFRVKPGTYTYNFLLNVLVDGNKLKLVEDVHSLMSSKGVKRDVATFNILIKALC 171
+ M + P YT+N L+N L +K ++ +M +G DV T+N +I LC
Sbjct: 282 IQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLC 341
Query: 170 KAHQMRPAILMMEEMPSHGLMPDEKTYTTLMHGFIEQGDLMGALRIREEMVS 15
K +++ A+ ++++M + P+ TY TL+ ++ + A + + S
Sbjct: 342 KLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTS 393