BLASTX nr result

ID: Atractylodes22_contig00007224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00007224
         (840 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531346.1| structural constituent of ribosome, putative...    71   3e-10
ref|XP_002274396.2| PREDICTED: 30S ribosomal protein S31, chloro...    68   3e-09
emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis vinifera]    68   3e-09
ref|XP_004147884.1| PREDICTED: 30S ribosomal protein S31, chloro...    64   4e-08
gb|AFK38352.1| unknown [Lotus japonicus]                               64   4e-08

>ref|XP_002531346.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223529044|gb|EEF31030.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 116

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 43/116 (37%), Positives = 57/116 (49%)
 Frame = -1

Query: 672 MASMALAVTSIPMASNSLAFSRSQSVXXXXXXXXXXXXXXXXXXXXXXXXXXXIYCGRGD 493
           MAS+ +A T++PM  + L+ S+S+++                           +YCGRGD
Sbjct: 1   MASLMMA-TALPMTPHRLSSSQSEALGVGISFSYSIPSLSVSTTTASTSPIPFVYCGRGD 59

Query: 492 KKTAKGKRFNHSFGXXXXXXXXXXXXXXXXXXXXXXXXKDKYDDGEVVKIEIDESL 325
           KKTAKGKRFNHSFG                         D ++DGEVVKI+IDESL
Sbjct: 60  KKTAKGKRFNHSFGNARPRNKNKGRGPPRIPVPSSPPTNDIFEDGEVVKIDIDESL 115


>ref|XP_002274396.2| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Vitis
           vinifera] gi|297740225|emb|CBI30407.3| unnamed protein
           product [Vitis vinifera]
          Length = 118

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 35/63 (55%), Positives = 38/63 (60%)
 Frame = -1

Query: 510 YCGRGDKKTAKGKRFNHSFGXXXXXXXXXXXXXXXXXXXXXXXXKDKYDDGEVVKIEIDE 331
           YCGRGDKKTAKGKRFNHSFG                        KD+++D EVVKIEIDE
Sbjct: 55  YCGRGDKKTAKGKRFNHSFGNARPRNKKKGRGPPRAPIPPSPPKKDRFEDDEVVKIEIDE 114

Query: 330 SLF 322
           SLF
Sbjct: 115 SLF 117


>emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis vinifera]
          Length = 117

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 35/63 (55%), Positives = 38/63 (60%)
 Frame = -1

Query: 510 YCGRGDKKTAKGKRFNHSFGXXXXXXXXXXXXXXXXXXXXXXXXKDKYDDGEVVKIEIDE 331
           YCGRGDKKTAKGKRFNHSFG                        KD+++D EVVKIEIDE
Sbjct: 54  YCGRGDKKTAKGKRFNHSFGNARPRNKKKGRGPPRAPIPPSPPKKDRFEDDEVVKIEIDE 113

Query: 330 SLF 322
           SLF
Sbjct: 114 SLF 116


>ref|XP_004147884.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Cucumis
           sativus] gi|449520074|ref|XP_004167059.1| PREDICTED: 30S
           ribosomal protein S31, chloroplastic-like [Cucumis
           sativus]
          Length = 118

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 32/63 (50%), Positives = 36/63 (57%)
 Frame = -1

Query: 510 YCGRGDKKTAKGKRFNHSFGXXXXXXXXXXXXXXXXXXXXXXXXKDKYDDGEVVKIEIDE 331
           YCGRGDKKT +GKRFNHS+G                        KDK+DD E +KIEIDE
Sbjct: 54  YCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDE 113

Query: 330 SLF 322
           SLF
Sbjct: 114 SLF 116


>gb|AFK38352.1| unknown [Lotus japonicus]
          Length = 121

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 32/63 (50%), Positives = 37/63 (58%)
 Frame = -1

Query: 510 YCGRGDKKTAKGKRFNHSFGXXXXXXXXXXXXXXXXXXXXXXXXKDKYDDGEVVKIEIDE 331
           YCGRGD+KT +GKRFNHSFG                        KDK++D EVVKI+IDE
Sbjct: 57  YCGRGDRKTERGKRFNHSFGNARPKDKKKGRGPPRLYAPPAPTKKDKFEDNEVVKIDIDE 116

Query: 330 SLF 322
           SLF
Sbjct: 117 SLF 119


Top