BLASTX nr result

ID: Atractylodes22_contig00007170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00007170
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158242.1| PREDICTED: 60S ribosomal protein L6-1-like [...    67   1e-09
ref|XP_004135912.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma...    67   1e-09
ref|XP_004149609.1| PREDICTED: 60S ribosomal protein L6-like [Cu...    65   4e-09
ref|XP_002299962.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
ref|XP_004154716.1| PREDICTED: 60S ribosomal protein L6-like [Cu...    64   1e-08

>ref|XP_004158242.1| PREDICTED: 60S ribosomal protein L6-1-like [Cucumis sativus]
          Length = 115

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 30/37 (81%), Positives = 32/37 (86%)
 Frame = +3

Query: 171 PAPQQITDRPDLIRGVGKYSRSKMYHKRGLWAIKAKN 281
           P   ++T  PDLIRGVGKYSRSKMYHKRGLWAIKAKN
Sbjct: 3   PKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKN 39


>ref|XP_004135912.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L6-like
           [Cucumis sativus]
          Length = 231

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 30/37 (81%), Positives = 32/37 (86%)
 Frame = +3

Query: 171 PAPQQITDRPDLIRGVGKYSRSKMYHKRGLWAIKAKN 281
           P   ++T  PDLIRGVGKYSRSKMYHKRGLWAIKAKN
Sbjct: 3   PKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKN 39


>ref|XP_004149609.1| PREDICTED: 60S ribosomal protein L6-like [Cucumis sativus]
           gi|449533212|ref|XP_004173570.1| PREDICTED: 60S
           ribosomal protein L6-like [Cucumis sativus]
          Length = 231

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/37 (78%), Positives = 32/37 (86%)
 Frame = +3

Query: 171 PAPQQITDRPDLIRGVGKYSRSKMYHKRGLWAIKAKN 281
           P   +++  PDLIRGVGKYSRSKMYHKRGLWAIKAKN
Sbjct: 3   PKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKN 39


>ref|XP_002299962.1| predicted protein [Populus trichocarpa] gi|222847220|gb|EEE84767.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 27/33 (81%), Positives = 31/33 (93%)
 Frame = +3

Query: 183 QITDRPDLIRGVGKYSRSKMYHKRGLWAIKAKN 281
           Q+T  PDL+RG+GKYSRS+MYHKRGLWAIKAKN
Sbjct: 8   QVTRNPDLVRGIGKYSRSQMYHKRGLWAIKAKN 40


>ref|XP_004154716.1| PREDICTED: 60S ribosomal protein L6-like [Cucumis sativus]
          Length = 231

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = +3

Query: 171 PAPQQITDRPDLIRGVGKYSRSKMYHKRGLWAIKAKN 281
           P   +++  P+LIRGVGKYSRSKMYHKRGLWAIKAKN
Sbjct: 3   PKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKN 39


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