BLASTX nr result

ID: Atractylodes22_contig00007112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00007112
         (687 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304162.1| predicted protein [Populus trichocarpa] gi|2...    59   2e-12
dbj|BAF30481.1| cytochrome c oxidase subunit Vb [Pisum sativum] ...    56   2e-12
dbj|BAF30482.1| cytochrome c oxidase subunit Vb [Pisum sativum] ...    56   2e-12
ref|NP_001240096.1| uncharacterized protein LOC100780886 [Glycin...    59   4e-12
ref|XP_003528355.1| PREDICTED: cytochrome c oxidase subunit 5b-2...    58   5e-12

>ref|XP_002304162.1| predicted protein [Populus trichocarpa] gi|222841594|gb|EEE79141.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score = 58.5 bits (140), Expect(2) = 2e-12
 Identities = 26/54 (48%), Positives = 35/54 (64%)
 Frame = +2

Query: 224 KRRVEDVMPIXXXXXXXXXXXXXXXXXILEMDFPEGPFGTKESPAIVQSVFDKR 385
           K+RVEDVMPI                 +L++DFPEGPFGTKE P++++S +DKR
Sbjct: 53  KKRVEDVMPIATGHEREELEAELEGKKLLDIDFPEGPFGTKEEPSVIKSYYDKR 106



 Score = 39.3 bits (90), Expect(2) = 2e-12
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +3

Query: 504 GKPHECPVCSQYFKLEVV 557
           GKPHECPVC+Q+F LEVV
Sbjct: 129 GKPHECPVCTQHFALEVV 146


>dbj|BAF30481.1| cytochrome c oxidase subunit Vb [Pisum sativum]
           gi|113734317|dbj|BAF30484.1| cytochrome c oxidase
           subunit Vb [Pisum sativum]
          Length = 150

 Score = 55.8 bits (133), Expect(2) = 2e-12
 Identities = 26/54 (48%), Positives = 35/54 (64%)
 Frame = +2

Query: 224 KRRVEDVMPIXXXXXXXXXXXXXXXXXILEMDFPEGPFGTKESPAIVQSVFDKR 385
           K+RVEDV+PI                 ILE+D PEGPFGTK++PA+V+S +D+R
Sbjct: 47  KKRVEDVVPIATGHEREEIQAELEGRNILEIDHPEGPFGTKDAPAVVRSFYDRR 100



 Score = 42.0 bits (97), Expect(2) = 2e-12
 Identities = 16/18 (88%), Positives = 18/18 (100%)
 Frame = +3

Query: 504 GKPHECPVCSQYFKLEVV 557
           GKPHECPVC+QYF+LEVV
Sbjct: 123 GKPHECPVCTQYFELEVV 140


>dbj|BAF30482.1| cytochrome c oxidase subunit Vb [Pisum sativum]
           gi|113734319|dbj|BAF30485.1| cytochrome c oxidase
           subunit Vb [Pisum sativum]
          Length = 150

 Score = 55.8 bits (133), Expect(2) = 2e-12
 Identities = 26/54 (48%), Positives = 35/54 (64%)
 Frame = +2

Query: 224 KRRVEDVMPIXXXXXXXXXXXXXXXXXILEMDFPEGPFGTKESPAIVQSVFDKR 385
           K+RVEDV+PI                 ILE+D PEGPFGTK++PA+V+S +D+R
Sbjct: 47  KKRVEDVVPIATGHEREEIQAELEGRNILEIDHPEGPFGTKDAPAVVRSFYDRR 100



 Score = 42.0 bits (97), Expect(2) = 2e-12
 Identities = 16/18 (88%), Positives = 18/18 (100%)
 Frame = +3

Query: 504 GKPHECPVCSQYFKLEVV 557
           GKPHECPVC+QYF+LEVV
Sbjct: 123 GKPHECPVCTQYFELEVV 140


>ref|NP_001240096.1| uncharacterized protein LOC100780886 [Glycine max]
           gi|255637280|gb|ACU18970.1| unknown [Glycine max]
          Length = 160

 Score = 58.5 bits (140), Expect(2) = 4e-12
 Identities = 28/54 (51%), Positives = 35/54 (64%)
 Frame = +2

Query: 224 KRRVEDVMPIXXXXXXXXXXXXXXXXXILEMDFPEGPFGTKESPAIVQSVFDKR 385
           K++VEDVMPI                 ILE+D PEGPFGTKE+PA+V+S +DKR
Sbjct: 52  KKKVEDVMPIATGHEREELQAELEGRNILEIDHPEGPFGTKEAPAVVKSYYDKR 105



 Score = 38.5 bits (88), Expect(2) = 4e-12
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +3

Query: 507 KPHECPVCSQYFKLEVV 557
           KPHECPVC+QYF LEVV
Sbjct: 129 KPHECPVCAQYFVLEVV 145


>ref|XP_003528355.1| PREDICTED: cytochrome c oxidase subunit 5b-2, mitochondrial-like
           isoform 1 [Glycine max] gi|356519391|ref|XP_003528356.1|
           PREDICTED: cytochrome c oxidase subunit 5b-2,
           mitochondrial-like isoform 2 [Glycine max]
          Length = 163

 Score = 58.2 bits (139), Expect(2) = 5e-12
 Identities = 27/54 (50%), Positives = 35/54 (64%)
 Frame = +2

Query: 224 KRRVEDVMPIXXXXXXXXXXXXXXXXXILEMDFPEGPFGTKESPAIVQSVFDKR 385
           K++VED+MPI                 ILE+D PEGPFGTKE+PA+V+S +DKR
Sbjct: 55  KKKVEDIMPIATGHEREELQAELEGRNILEIDHPEGPFGTKEAPAVVKSYYDKR 108



 Score = 38.5 bits (88), Expect(2) = 5e-12
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +3

Query: 507 KPHECPVCSQYFKLEVV 557
           KPHECPVC+QYF LEVV
Sbjct: 132 KPHECPVCAQYFVLEVV 148


Top