BLASTX nr result

ID: Atractylodes22_contig00006976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00006976
         (999 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21297.3| unnamed protein product [Vitis vinifera]              219   2e-61
ref|XP_002274525.1| PREDICTED: translocon-associated protein sub...   231   2e-58
ref|XP_002871597.1| translocon-associated protein beta family pr...   224   2e-56
gb|ABK94173.1| unknown [Populus trichocarpa]                          223   4e-56
ref|XP_002274610.2| PREDICTED: translocon-associated protein sub...   223   7e-56

>emb|CBI21297.3| unnamed protein product [Vitis vinifera]
          Length = 205

 Score =  219 bits (558), Expect(2) = 2e-61
 Identities = 108/154 (70%), Positives = 128/154 (83%)
 Frame = +1

Query: 124 MMNSLISLVTLIFLVSSVFAASDSPFIVAHKKATLNRLKSGAEKLSVSIDIYNQGSATAY 303
           M  +LIS+V  + LVSS   +SD PFIVAHKKA+L RLKSGAE++SVSIDIYNQGS TAY
Sbjct: 1   MAKTLISVVVALILVSSTLGSSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSTTAY 60

Query: 304 DVSLTDDGWSNEIFSIISGNTSTSWERLDAGALLSHSFELESKVKTVFYSTPAVITFRVP 483
           DVSLTDD WS ++F+I+SGNTSTSWERLDAG LLSH+FELESKV+ +FY  PAVITFR+P
Sbjct: 61  DVSLTDDSWSQDVFNIVSGNTSTSWERLDAGGLLSHAFELESKVEGMFYGAPAVITFRIP 120

Query: 484 TKAALQEAYSTPLLPLEILSDKPRESTLDLAKKV 585
           T AALQEAYSTP+LPL+IL+ +P E   +  K V
Sbjct: 121 TTAALQEAYSTPILPLDILAVRPPEKKFEWVKVV 154



 Score = 44.3 bits (103), Expect(2) = 2e-61
 Identities = 20/40 (50%), Positives = 27/40 (67%)
 Frame = +3

Query: 585 VG*VRVVNICDLHRGFICVPGGNSIQVWCWKGKQEETLMI 704
           VG + V ++CDLH   +CV G  SI++ CW+ KQEE L I
Sbjct: 154 VGKIWVPDLCDLHCVCLCVSGRQSIKIRCWERKQEEALTI 193


>ref|XP_002274525.1| PREDICTED: translocon-associated protein subunit beta isoform 1
           [Vitis vinifera]
          Length = 191

 Score =  231 bits (589), Expect = 2e-58
 Identities = 113/159 (71%), Positives = 135/159 (84%)
 Frame = +1

Query: 124 MMNSLISLVTLIFLVSSVFAASDSPFIVAHKKATLNRLKSGAEKLSVSIDIYNQGSATAY 303
           M  +LIS+V  + LVSS   +SD PFIVAHKKA+L RLKSGAE++SVSIDIYNQGS TAY
Sbjct: 1   MAKTLISVVVALILVSSTLGSSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSTTAY 60

Query: 304 DVSLTDDGWSNEIFSIISGNTSTSWERLDAGALLSHSFELESKVKTVFYSTPAVITFRVP 483
           DVSLTDD WS ++F+I+SGNTSTSWERLDAG LLSH+FELESKV+ +FY  PAVITFR+P
Sbjct: 61  DVSLTDDSWSQDVFNIVSGNTSTSWERLDAGGLLSHAFELESKVEGMFYGAPAVITFRIP 120

Query: 484 TKAALQEAYSTPLLPLEILSDKPRESTLDLAKKVLAKYG 600
           T AALQEAYSTP+LPL+IL+ +P E   + AK++LAKYG
Sbjct: 121 TTAALQEAYSTPILPLDILAVRPPEKKFEWAKRLLAKYG 159


>ref|XP_002871597.1| translocon-associated protein beta family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297317434|gb|EFH47856.1|
           translocon-associated protein beta family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 195

 Score =  224 bits (572), Expect = 2e-56
 Identities = 108/155 (69%), Positives = 130/155 (83%)
 Frame = +1

Query: 136 LISLVTLIFLVSSVFAASDSPFIVAHKKATLNRLKSGAEKLSVSIDIYNQGSATAYDVSL 315
           LIS + +  LVS+ FA S+ PF+V HKKATLNRLKSGAE++SVS DIYNQGS+TAYDV+L
Sbjct: 9   LISAMAVFMLVSASFATSEVPFMVVHKKATLNRLKSGAERVSVSYDIYNQGSSTAYDVTL 68

Query: 316 TDDGWSNEIFSIISGNTSTSWERLDAGALLSHSFELESKVKTVFYSTPAVITFRVPTKAA 495
           TD+ W    F +++GNTS SWERLDAG +LSHSFELE+KVK VFY  PAV+TFR+PTK A
Sbjct: 69  TDNSWDKATFEVVNGNTSKSWERLDAGGILSHSFELEAKVKGVFYGAPAVVTFRIPTKPA 128

Query: 496 LQEAYSTPLLPLEILSDKPRESTLDLAKKVLAKYG 600
           LQEAYSTPLLPL+IL+DKP    LD+AK++LAKYG
Sbjct: 129 LQEAYSTPLLPLDILADKPPTKILDVAKRLLAKYG 163


>gb|ABK94173.1| unknown [Populus trichocarpa]
          Length = 196

 Score =  223 bits (569), Expect = 4e-56
 Identities = 110/164 (67%), Positives = 135/164 (82%)
 Frame = +1

Query: 109 MANFTMMNSLISLVTLIFLVSSVFAASDSPFIVAHKKATLNRLKSGAEKLSVSIDIYNQG 288
           MAN      L S++  + LVSS  A+SD PFIVAHKKAT   LKSGAE++SVSIDIYNQG
Sbjct: 1   MANPITTKILFSILLSLLLVSSSLASSDVPFIVAHKKATPRGLKSGAERVSVSIDIYNQG 60

Query: 289 SATAYDVSLTDDGWSNEIFSIISGNTSTSWERLDAGALLSHSFELESKVKTVFYSTPAVI 468
           S+TAYD++LTDD W  +IF ++SGNTS SW+RLDAG LLSH+FELE KVK +F+ +PAVI
Sbjct: 61  SSTAYDITLTDDHWPKDIFDVVSGNTSQSWDRLDAGGLLSHAFELEGKVKGMFHGSPAVI 120

Query: 469 TFRVPTKAALQEAYSTPLLPLEILSDKPRESTLDLAKKVLAKYG 600
           TFR+PTKAALQEAYSTP+LPL++L++KP    L+LAKK+LAKYG
Sbjct: 121 TFRIPTKAALQEAYSTPILPLDVLAEKPPVQKLELAKKLLAKYG 164


>ref|XP_002274610.2| PREDICTED: translocon-associated protein subunit beta isoform 2
           [Vitis vinifera]
          Length = 189

 Score =  223 bits (567), Expect = 7e-56
 Identities = 111/159 (69%), Positives = 133/159 (83%)
 Frame = +1

Query: 124 MMNSLISLVTLIFLVSSVFAASDSPFIVAHKKATLNRLKSGAEKLSVSIDIYNQGSATAY 303
           M  +LIS+V  + LVSS   +SD PFIVAHKKA+L RLKSGAE++SVSIDIYNQGS TAY
Sbjct: 1   MAKTLISVVVALILVSSTLGSSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSTTAY 60

Query: 304 DVSLTDDGWSNEIFSIISGNTSTSWERLDAGALLSHSFELESKVKTVFYSTPAVITFRVP 483
           DVSLTDD WS ++F+I+SGNTSTSWERLDAG LLSH+FELESKV+ +FY  PAVITFR+P
Sbjct: 61  DVSLTDDSWSQDVFNIVSGNTSTSWERLDAGGLLSHAFELESKVEGMFYGAPAVITFRIP 120

Query: 484 TKAALQEAYSTPLLPLEILSDKPRESTLDLAKKVLAKYG 600
           T AALQEAYSTP+LPL+IL+ +P E   +   ++LAKYG
Sbjct: 121 TTAALQEAYSTPILPLDILAVRPPEKKFEW--RLLAKYG 157


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