BLASTX nr result
ID: Atractylodes22_contig00006968
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00006968
(636 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280582.1| PREDICTED: FACT complex subunit SPT16-like [... 92 1e-27
emb|CAN64798.1| hypothetical protein VITISV_017317 [Vitis vinifera] 92 1e-27
ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [... 89 4e-24
ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinu... 94 5e-24
ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex... 88 1e-23
>ref|XP_002280582.1| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
Length = 1083
Score = 91.7 bits (226), Expect(3) = 1e-27
Identities = 50/84 (59%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -3
Query: 499 PVLGYIAREAPKGMLLEKRTEKLTSSSLRLCDIATGLGDLFAVPDSGELTNV-KIAYLTA 323
P +GY+A+EAP+G LL+ +EKL +SS+ L D+ L DLF++ DS ELTNV K A+LTA
Sbjct: 150 PTIGYLAKEAPEGKLLDTWSEKLKNSSIGLSDMTNWLSDLFSIKDSIELTNVKKAAFLTA 209
Query: 322 A-MKKFVVPKLNNVIQEEKKVTHS 254
+ MK VVP L NVI EEKKVTHS
Sbjct: 210 SVMKNVVVPNLENVIDEEKKVTHS 233
Score = 50.1 bits (118), Expect(3) = 1e-27
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = -1
Query: 591 IDVVIHVKANTDDGATQMDAILRAIEAQKNP 499
+DVVIHVKA TDDG+TQMDAI AI+AQ P
Sbjct: 120 VDVVIHVKAKTDDGSTQMDAIFHAIQAQSIP 150
Score = 27.7 bits (60), Expect(3) = 1e-27
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1
Query: 165 VIEPTRIMV*LCYENVDICY 106
+++PT+ V L ENVDICY
Sbjct: 243 IVDPTKAKVRLRAENVDICY 262
>emb|CAN64798.1| hypothetical protein VITISV_017317 [Vitis vinifera]
Length = 1083
Score = 91.7 bits (226), Expect(3) = 1e-27
Identities = 50/84 (59%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -3
Query: 499 PVLGYIAREAPKGMLLEKRTEKLTSSSLRLCDIATGLGDLFAVPDSGELTNV-KIAYLTA 323
P +GY+A+EAP+G LL+ +EKL +SS+ L D+ L DLF++ DS ELTNV K A+LTA
Sbjct: 150 PTIGYLAKEAPEGKLLDTWSEKLKNSSIGLSDMTNWLSDLFSIKDSIELTNVKKAAFLTA 209
Query: 322 A-MKKFVVPKLNNVIQEEKKVTHS 254
+ MK VVP L NVI EEKKVTHS
Sbjct: 210 SVMKNVVVPNLENVIDEEKKVTHS 233
Score = 50.1 bits (118), Expect(3) = 1e-27
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = -1
Query: 591 IDVVIHVKANTDDGATQMDAILRAIEAQKNP 499
+DVVIHVKA TDDG+TQMDAI AI+AQ P
Sbjct: 120 VDVVIHVKAKTDDGSTQMDAIFHAIQAQSIP 150
Score = 27.7 bits (60), Expect(3) = 1e-27
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1
Query: 165 VIEPTRIMV*LCYENVDICY 106
+++PT+ V L ENVDICY
Sbjct: 243 IVDPTKAKVRLRAENVDICY 262
>ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [Cucumis sativus]
Length = 1073
Score = 89.4 bits (220), Expect(3) = 4e-24
Identities = 47/86 (54%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Frame = -3
Query: 505 KSPVLGYIAREAPKGMLLEKRTEKLTSSSLRLCDIATGLGDLFAVPDSGELTNV-KIAYL 329
++PV+GYIAREAP+G LLE + KL +++ L DI GL DLFA D E+ N+ K A+L
Sbjct: 154 ENPVVGYIAREAPEGKLLETWSGKLKNANFELVDITNGLSDLFACKDDTEIMNIKKAAFL 213
Query: 328 T-AAMKKFVVPKLNNVIQEEKKVTHS 254
T + M + VVPK+ NVI EEKK+THS
Sbjct: 214 TVSVMNRVVVPKMENVIDEEKKITHS 239
Score = 40.0 bits (92), Expect(3) = 4e-24
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = -1
Query: 588 DVVIHVKANTDDGATQMDAILRAIEAQ 508
DVV+HVKA DDG++ MD+I RAI AQ
Sbjct: 121 DVVMHVKAKNDDGSSLMDSIFRAIRAQ 147
Score = 27.7 bits (60), Expect(3) = 4e-24
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -1
Query: 165 VIEPTRIMV*LCYENVDICY 106
++EPT+ V L ENVDICY
Sbjct: 249 ILEPTKAGVKLKTENVDICY 268
>ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinus communis]
gi|223548526|gb|EEF50017.1| FACT complex subunit SPT16,
putative [Ricinus communis]
Length = 1098
Score = 94.4 bits (233), Expect(3) = 5e-24
Identities = 51/91 (56%), Positives = 66/91 (72%), Gaps = 2/91 (2%)
Frame = -3
Query: 514 SSKKSPVLGYIAREAPKGMLLEKRTEKLTSSSLRLCDIATGLGDLFAVPDSGELTNV-KI 338
S K+PV+G+IARE+P+G LLE +KL + + L D+ G DLFAV D+ ELT V K
Sbjct: 147 SGDKTPVIGHIARESPEGKLLEIWDKKLKNGNCELSDVTNGFSDLFAVKDNTELTYVRKA 206
Query: 337 AYLTAA-MKKFVVPKLNNVIQEEKKVTHSKF 248
A+LT++ MK+FVVPKL VI EEKK+THS F
Sbjct: 207 AFLTSSVMKQFVVPKLEKVIDEEKKITHSSF 237
Score = 33.1 bits (74), Expect(3) = 5e-24
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = -1
Query: 591 IDVVIHVKANTDDGATQMDAILRAIEA 511
++VV+HVK +DDG++ MD I A+ A
Sbjct: 119 VEVVMHVKTKSDDGSSLMDNIFNAVHA 145
Score = 29.3 bits (64), Expect(3) = 5e-24
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -1
Query: 165 VIEPTRIMV*LCYENVDICY 106
++EP RI V L EN+DICY
Sbjct: 245 ILEPARIKVKLKAENIDICY 264
>ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SPT16-like
[Cucumis sativus]
Length = 1073
Score = 87.8 bits (216), Expect(3) = 1e-23
Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Frame = -3
Query: 505 KSPVLGYIAREAPKGMLLEKRTEKLTSSSLRLCDIATGLGDLFAVPDSGELTNV-KIAYL 329
++PV+GYIAREAP+G LLE + KL +++ L DI GL DLFA D E+ N+ K A+L
Sbjct: 154 ENPVVGYIAREAPEGKLLETWSGKLKNANFELVDITNGLSDLFACKDDTEIMNIKKAAFL 213
Query: 328 T-AAMKKFVVPKLNNVIQEEKKVTHS 254
T + M + VVPK+ NVI EEKK THS
Sbjct: 214 TVSVMNRVVVPKMENVIDEEKKXTHS 239
Score = 40.0 bits (92), Expect(3) = 1e-23
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = -1
Query: 588 DVVIHVKANTDDGATQMDAILRAIEAQ 508
DVV+HVKA DDG++ MD+I RAI AQ
Sbjct: 121 DVVMHVKAKNDDGSSLMDSIFRAIRAQ 147
Score = 27.7 bits (60), Expect(3) = 1e-23
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -1
Query: 165 VIEPTRIMV*LCYENVDICY 106
++EPT+ V L ENVDICY
Sbjct: 249 ILEPTKAGVKLKTENVDICY 268