BLASTX nr result

ID: Atractylodes22_contig00006963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00006963
         (1009 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545861.1| PREDICTED: katanin p80 WD40 repeat-containin...   386   e-105
ref|XP_003543076.1| PREDICTED: katanin p80 WD40 repeat-containin...   384   e-104
emb|CBI38493.3| unnamed protein product [Vitis vinifera]              380   e-103
ref|XP_002521412.1| katanin P80 subunit, putative [Ricinus commu...   371   e-100
ref|XP_002266048.2| PREDICTED: katanin p80 WD40 repeat-containin...   370   e-100

>ref|XP_003545861.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           1-like [Glycine max]
          Length = 825

 Score =  386 bits (991), Expect = e-105
 Identities = 182/221 (82%), Positives = 198/221 (89%)
 Frame = -1

Query: 664 MAKRGYKLQEFVAHSANVNCIKIGKKTRRHFITGGDDEIVNLWSIGKPTCITSLSGHTSP 485
           MAKRGYK+QEFVAHSA+VNC+ IGKK  R FITGGDD  VNLW+IGKPT +TSLSGHTSP
Sbjct: 1   MAKRGYKIQEFVAHSASVNCLNIGKKACRLFITGGDDHKVNLWTIGKPTFLTSLSGHTSP 60

Query: 484 IESVAFDSTEVLXXXXXXXXXVKIWDLEETKVVRTLNGHRSYCTAVEFHPFGEFFASGSM 305
           +ESVAFDS EVL         +K+WDLEE K+VRT+ GHRS CTAVEFHPFGEFFASGSM
Sbjct: 61  VESVAFDSGEVLVLGGASTGVIKLWDLEEAKMVRTVAGHRSNCTAVEFHPFGEFFASGSM 120

Query: 304 DTNLKIWDIRKKGCIHTYKGHKRAISTIRFTPDGRWVVSGGLDNVVKIWDLTAGKLLHEF 125
           DTNLKIWDIRKKGCIHTYKGH + ISTI+FTPDGRWVVSGG DNVVK+WDLTAGKLLH+F
Sbjct: 121 DTNLKIWDIRKKGCIHTYKGHSQGISTIKFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180

Query: 124 KFHEGHIRSMDFHPLEFLLATGSSDRTVKFWDLETFELIGS 2
           KFHEGHIRS+DFHPLEFLLATGS+DRTVKFWDLETFELIGS
Sbjct: 181 KFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGS 221



 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 1/141 (0%)
 Frame = -1

Query: 574 FITGGDDEIVNLWSIGKPTCITSLSGHTSPIESVAFDSTEVLXXXXXXXXXVKIWDLEET 395
           F +G  D  + +W I K  CI +  GH+  I ++ F               VK+WDL   
Sbjct: 115 FASGSMDTNLKIWDIRKKGCIHTYKGHSQGISTIKFTPDGRWVVSGGFDNVVKVWDLTAG 174

Query: 394 KVVRTLNGHRSYCTAVEFHPFGEFFASGSMDTNLKIWDIRKKGCIHTYKGHKRAISTIRF 215
           K++     H  +  +++FHP     A+GS D  +K WD+     I + +     + +I F
Sbjct: 175 KLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSARREATGVRSIAF 234

Query: 214 TPDGRWVVSGGLDNV-VKIWD 155
            PDGR + +G  D + V  W+
Sbjct: 235 HPDGRTLFTGHEDGLKVYSWE 255


>ref|XP_003543076.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           1-like [Glycine max]
          Length = 824

 Score =  384 bits (986), Expect = e-104
 Identities = 182/221 (82%), Positives = 197/221 (89%)
 Frame = -1

Query: 664 MAKRGYKLQEFVAHSANVNCIKIGKKTRRHFITGGDDEIVNLWSIGKPTCITSLSGHTSP 485
           MAKRGYK+QEFVAHSA+VNC+ IGKK  R FITGGDD  VNLW+IGKPT ITSLSGHTSP
Sbjct: 1   MAKRGYKIQEFVAHSASVNCLNIGKKACRLFITGGDDHKVNLWTIGKPTPITSLSGHTSP 60

Query: 484 IESVAFDSTEVLXXXXXXXXXVKIWDLEETKVVRTLNGHRSYCTAVEFHPFGEFFASGSM 305
           +ESVAFDS EVL         +K+WDLEE K+VRT+ GHRS CTAVEFHPFGEFFASGSM
Sbjct: 61  VESVAFDSGEVLVLGGASTGVIKLWDLEEAKMVRTVAGHRSNCTAVEFHPFGEFFASGSM 120

Query: 304 DTNLKIWDIRKKGCIHTYKGHKRAISTIRFTPDGRWVVSGGLDNVVKIWDLTAGKLLHEF 125
           DTNLKIWDIRKKGCIHTYKGH + IS I+FTPDGRWVVSGG DNVVK+WDLTAGKLLH+F
Sbjct: 121 DTNLKIWDIRKKGCIHTYKGHSQGISIIKFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180

Query: 124 KFHEGHIRSMDFHPLEFLLATGSSDRTVKFWDLETFELIGS 2
           KFHEGHIRS+DFHPLEFLLATGS+DRTVKFWDLETFELIGS
Sbjct: 181 KFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGS 221



 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 1/141 (0%)
 Frame = -1

Query: 574 FITGGDDEIVNLWSIGKPTCITSLSGHTSPIESVAFDSTEVLXXXXXXXXXVKIWDLEET 395
           F +G  D  + +W I K  CI +  GH+  I  + F               VK+WDL   
Sbjct: 115 FASGSMDTNLKIWDIRKKGCIHTYKGHSQGISIIKFTPDGRWVVSGGFDNVVKVWDLTAG 174

Query: 394 KVVRTLNGHRSYCTAVEFHPFGEFFASGSMDTNLKIWDIRKKGCIHTYKGHKRAISTIRF 215
           K++     H  +  +++FHP     A+GS D  +K WD+     I + +     + +I F
Sbjct: 175 KLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSARPEATGVRSIAF 234

Query: 214 TPDGRWVVSGGLDNV-VKIWD 155
            PDGR + +G  D + V  W+
Sbjct: 235 HPDGRALFTGHEDGLKVYSWE 255


>emb|CBI38493.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  380 bits (976), Expect = e-103
 Identities = 178/221 (80%), Positives = 193/221 (87%)
 Frame = -1

Query: 664 MAKRGYKLQEFVAHSANVNCIKIGKKTRRHFITGGDDEIVNLWSIGKPTCITSLSGHTSP 485
           MAKRGYKLQEFVAH+ NVNC+ IGKK  R  I+GGDD  VNLW+IGKPT + SL GHTSP
Sbjct: 1   MAKRGYKLQEFVAHTTNVNCLNIGKKACRLLISGGDDHKVNLWAIGKPTSLMSLCGHTSP 60

Query: 484 IESVAFDSTEVLXXXXXXXXXVKIWDLEETKVVRTLNGHRSYCTAVEFHPFGEFFASGSM 305
           +ESV FDS EVL         +K+WDLEE K+VRTL GHRS CTAVEFHPFGEFFASGS+
Sbjct: 61  VESVTFDSAEVLVAAGASTGVIKLWDLEEAKMVRTLTGHRSNCTAVEFHPFGEFFASGSL 120

Query: 304 DTNLKIWDIRKKGCIHTYKGHKRAISTIRFTPDGRWVVSGGLDNVVKIWDLTAGKLLHEF 125
           DTNLK+WDIRKKGCIHTYKGH R ISTIRFTPDGRWVVSGG DNVVK+WDLTAGKLLH+F
Sbjct: 121 DTNLKVWDIRKKGCIHTYKGHTRGISTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180

Query: 124 KFHEGHIRSMDFHPLEFLLATGSSDRTVKFWDLETFELIGS 2
           KFHEGHIRS+DFHPLEFLLATGS+DRTVKFWDLETFELIGS
Sbjct: 181 KFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGS 221


>ref|XP_002521412.1| katanin P80 subunit, putative [Ricinus communis]
           gi|223539311|gb|EEF40902.1| katanin P80 subunit,
           putative [Ricinus communis]
          Length = 936

 Score =  371 bits (952), Expect = e-100
 Identities = 177/232 (76%), Positives = 196/232 (84%), Gaps = 11/232 (4%)
 Frame = -1

Query: 664 MAKRGYKL-----------QEFVAHSANVNCIKIGKKTRRHFITGGDDEIVNLWSIGKPT 518
           MAKRGYKL           +EFVAHS+NVNC+ IGKKT R +ITGGDD  VNLW+IGKPT
Sbjct: 1   MAKRGYKLRILFSLTEMKLEEFVAHSSNVNCLNIGKKTCRMYITGGDDYKVNLWAIGKPT 60

Query: 517 CITSLSGHTSPIESVAFDSTEVLXXXXXXXXXVKIWDLEETKVVRTLNGHRSYCTAVEFH 338
            + SL GHTSP+ES+AFD+ EVL         +K+WDLEE K+VRTL GHRS CTA+EFH
Sbjct: 61  SLMSLCGHTSPVESLAFDTAEVLVLGGASTGVIKLWDLEEAKMVRTLTGHRSNCTAIEFH 120

Query: 337 PFGEFFASGSMDTNLKIWDIRKKGCIHTYKGHKRAISTIRFTPDGRWVVSGGLDNVVKIW 158
           PFGEFFASGS DTNLK+WDIRKKG +HTYKGH R ISTIRFTPDGRWVVSGGLDNVVK+W
Sbjct: 121 PFGEFFASGSADTNLKLWDIRKKGTLHTYKGHTRGISTIRFTPDGRWVVSGGLDNVVKVW 180

Query: 157 DLTAGKLLHEFKFHEGHIRSMDFHPLEFLLATGSSDRTVKFWDLETFELIGS 2
           DLTAGKLLH+FKFHEGHIRS+DFHPLEFLLATGS+DRTVKFWDLETFELIGS
Sbjct: 181 DLTAGKLLHDFKFHEGHIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGS 232


>ref|XP_002266048.2| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           1-like [Vitis vinifera]
          Length = 545

 Score =  370 bits (951), Expect = e-100
 Identities = 177/232 (76%), Positives = 193/232 (83%), Gaps = 11/232 (4%)
 Frame = -1

Query: 664 MAKRGYKL-----------QEFVAHSANVNCIKIGKKTRRHFITGGDDEIVNLWSIGKPT 518
           MAKRGYKL           +EFVAH+ NVNC+ IGKK  R  I+GGDD  VNLW+IGKPT
Sbjct: 1   MAKRGYKLRILFCLTKLNIEEFVAHTTNVNCLNIGKKACRLLISGGDDHKVNLWAIGKPT 60

Query: 517 CITSLSGHTSPIESVAFDSTEVLXXXXXXXXXVKIWDLEETKVVRTLNGHRSYCTAVEFH 338
            + SL GHTSP+ESV FDS EVL         +K+WDLEE K+VRTL GHRS CTAVEFH
Sbjct: 61  SLMSLCGHTSPVESVTFDSAEVLVAAGASTGVIKLWDLEEAKMVRTLTGHRSNCTAVEFH 120

Query: 337 PFGEFFASGSMDTNLKIWDIRKKGCIHTYKGHKRAISTIRFTPDGRWVVSGGLDNVVKIW 158
           PFGEFFASGS+DTNLK+WDIRKKGCIHTYKGH R ISTIRFTPDGRWVVSGG DNVVK+W
Sbjct: 121 PFGEFFASGSLDTNLKVWDIRKKGCIHTYKGHTRGISTIRFTPDGRWVVSGGFDNVVKVW 180

Query: 157 DLTAGKLLHEFKFHEGHIRSMDFHPLEFLLATGSSDRTVKFWDLETFELIGS 2
           DLTAGKLLH+FKFHEGHIRS+DFHPLEFLLATGS+DRTVKFWDLETFELIGS
Sbjct: 181 DLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGS 232


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