BLASTX nr result

ID: Atractylodes22_contig00006915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00006915
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265283.2| PREDICTED: putative transcription elongation...   101   6e-20
ref|XP_003526672.1| PREDICTED: putative transcription elongation...    97   1e-18
ref|XP_003523402.1| PREDICTED: putative transcription elongation...    97   1e-18
ref|XP_004162900.1| PREDICTED: putative transcription elongation...    95   5e-18
ref|XP_002313759.1| global transcription factor group [Populus t...    92   3e-17

>ref|XP_002265283.2| PREDICTED: putative transcription elongation factor SPT5 homolog
           1-like isoform 1 [Vitis vinifera]
           gi|302142757|emb|CBI19960.3| unnamed protein product
           [Vitis vinifera]
          Length = 1034

 Score =  101 bits (252), Expect = 6e-20
 Identities = 50/67 (74%), Positives = 55/67 (82%)
 Frame = +2

Query: 2   LVGARIKIRLGPFKGYEGRVVDVHGTSIRVELESQMRVVTVDRTYISDNVNVTTSYRDTH 181
           L+G+ IKIR GPFKGY GRVVDV+G S+RVELESQM+VVTVDR  ISDNV V T YRD  
Sbjct: 701 LIGSTIKIRQGPFKGYRGRVVDVNGQSVRVELESQMKVVTVDRNQISDNVAVATPYRDAP 760

Query: 182 RYGSGSE 202
           RYG GSE
Sbjct: 761 RYGMGSE 767


>ref|XP_003526672.1| PREDICTED: putative transcription elongation factor SPT5 homolog
           1-like [Glycine max]
          Length = 1039

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/67 (70%), Positives = 55/67 (82%)
 Frame = +2

Query: 2   LVGARIKIRLGPFKGYEGRVVDVHGTSIRVELESQMRVVTVDRTYISDNVNVTTSYRDTH 181
           L G  +K+R GP+KGY GRV+DV GT++RVELESQM+VVTVDR +ISDNV V T YRDT 
Sbjct: 708 LAGTTVKVRQGPYKGYRGRVIDVKGTTVRVELESQMKVVTVDRNHISDNVAV-TPYRDTS 766

Query: 182 RYGSGSE 202
           RYG GSE
Sbjct: 767 RYGMGSE 773


>ref|XP_003523402.1| PREDICTED: putative transcription elongation factor SPT5 homolog
           1-like [Glycine max]
          Length = 1050

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/67 (70%), Positives = 55/67 (82%)
 Frame = +2

Query: 2   LVGARIKIRLGPFKGYEGRVVDVHGTSIRVELESQMRVVTVDRTYISDNVNVTTSYRDTH 181
           L G  +K+R GP+KGY GRV+DV GT++RVELESQM+VVTVDR +ISDNV V T YRDT 
Sbjct: 719 LAGTTVKVRQGPYKGYRGRVIDVKGTTVRVELESQMKVVTVDRNHISDNVAV-TPYRDTS 777

Query: 182 RYGSGSE 202
           RYG GSE
Sbjct: 778 RYGMGSE 784


>ref|XP_004162900.1| PREDICTED: putative transcription elongation factor SPT5 homolog
           1-like, partial [Cucumis sativus]
          Length = 849

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 43/67 (64%), Positives = 55/67 (82%)
 Frame = +2

Query: 2   LVGARIKIRLGPFKGYEGRVVDVHGTSIRVELESQMRVVTVDRTYISDNVNVTTSYRDTH 181
           LVG+ +K+R GP+KGY GRVV++ G  +RVELESQM+VVTVDR +ISDNV ++T +RD  
Sbjct: 515 LVGSTVKVRQGPYKGYRGRVVEIKGQLVRVELESQMKVVTVDRNFISDNVAISTPHRDAS 574

Query: 182 RYGSGSE 202
           RYG GSE
Sbjct: 575 RYGMGSE 581


>ref|XP_002313759.1| global transcription factor group [Populus trichocarpa]
           gi|222850167|gb|EEE87714.1| global transcription factor
           group [Populus trichocarpa]
          Length = 1042

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 48/74 (64%), Positives = 55/74 (74%), Gaps = 7/74 (9%)
 Frame = +2

Query: 2   LVGARIKIRLGPFKGYEGRVVDVHGTSIRVELESQMRVVT-------VDRTYISDNVNVT 160
           LVG  IK+R GPFKGY GRVVD+ G  +RVELESQM+VVT       VDR++ISDNV V+
Sbjct: 701 LVGTTIKVRQGPFKGYRGRVVDIKGQFVRVELESQMKVVTGKYSSMSVDRSHISDNVVVS 760

Query: 161 TSYRDTHRYGSGSE 202
           T YRD  RYG GSE
Sbjct: 761 TPYRDAPRYGMGSE 774


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