BLASTX nr result

ID: Atractylodes22_contig00006899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00006899
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275116.1| PREDICTED: protein TOPLESS [Vitis vinifera] ...    88   1e-15
ref|XP_002520011.1| conserved hypothetical protein [Ricinus comm...    86   4e-15
gb|AAP45184.2| Beta transducin-like protein, putative [Solanum b...    85   1e-14
ref|XP_001781989.1| predicted protein [Physcomitrella patens sub...    84   2e-14
gb|AAN62336.1|AF506028_3 CTV.2 [Citrus trifoliata]                     84   3e-14

>ref|XP_002275116.1| PREDICTED: protein TOPLESS [Vitis vinifera]
           gi|297737353|emb|CBI26554.3| unnamed protein product
           [Vitis vinifera]
          Length = 1135

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 40/59 (67%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
 Frame = -2

Query: 240 LNWRHQICKNTRLNPDIKRLFFTDHTCAFDNGGQAPPPTNSSLTGPVPKAGVF-PIGAH 67
           LNW+HQ+CKN R NPDIK LF TDH C   NG + PPPTN+ L GP+PKAG F PIGAH
Sbjct: 179 LNWQHQLCKNPRSNPDIKTLF-TDHACTPTNGARPPPPTNNPLVGPIPKAGAFPPIGAH 236


>ref|XP_002520011.1| conserved hypothetical protein [Ricinus communis]
           gi|223540775|gb|EEF42335.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1137

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 41/62 (66%), Positives = 48/62 (77%), Gaps = 3/62 (4%)
 Frame = -2

Query: 240 LNWRHQICKNTRLNPDIKRLFFTDHTC--AFDNGGQAPPPTNSSLTGPVPKAGVF-PIGA 70
           LNW+HQ+CKN R NPDIK L FTDH+C  +  NG + PPPTNS + GP+PKAG F PIGA
Sbjct: 179 LNWQHQLCKNPRPNPDIKTL-FTDHSCSPSTANGARPPPPTNSPIVGPIPKAGAFPPIGA 237

Query: 69  HG 64
           HG
Sbjct: 238 HG 239


>gb|AAP45184.2| Beta transducin-like protein, putative [Solanum bulbocastanum]
          Length = 610

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 39/59 (66%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
 Frame = -2

Query: 240 LNWRHQICKNTRLNPDIKRLFFTDHTCAFDNGGQAPPPTNSSLTGPVPKAGVF-PIGAH 67
           LNW+HQ+CKN R NPDIK LF TDHTC+  NG + PPP N+ L GPVPK G F P+GAH
Sbjct: 179 LNWQHQLCKNPRPNPDIKTLF-TDHTCSSSNGTRPPPPGNTPLAGPVPKPGAFPPLGAH 236


>ref|XP_001781989.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162666562|gb|EDQ53213.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 1102

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 36/58 (62%), Positives = 42/58 (72%)
 Frame = -2

Query: 240 LNWRHQICKNTRLNPDIKRLFFTDHTCAFDNGGQAPPPTNSSLTGPVPKAGVFPIGAH 67
           LNW+HQ+CKN R NPDIK LF  DHTC   NG +APPP N+ L G +PK G FP+G H
Sbjct: 179 LNWQHQLCKNPRPNPDIKTLFI-DHTCGPPNGARAPPPANNPLVGGIPKQGAFPLGTH 235


>gb|AAN62336.1|AF506028_3 CTV.2 [Citrus trifoliata]
          Length = 1127

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 39/60 (65%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
 Frame = -2

Query: 240 LNWRHQICKNTRLNPDIKRLFFTDHTCAFDNGGQAPPPTNSSLTGPVPKAGVF-PIGAHG 64
           LNW+HQ+CKN R NPDIK LF  DHTC   NG +AP P N+ L G +PKAGVF P+GAHG
Sbjct: 171 LNWQHQLCKNPRPNPDIKTLF-VDHTCGQPNGARAPSPANNPLLGSLPKAGVFPPLGAHG 229


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