BLASTX nr result

ID: Atractylodes22_contig00006895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00006895
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA34085.1| DNA-binding protein [Nicotiana tabacum]                212   5e-53
gb|AAB23811.1| Box II Factor, partial [Nicotiana tabacum] gi|404...   212   5e-53
prf||2103313A GT1a protein                                            212   5e-53
ref|XP_002315635.1| predicted protein [Populus trichocarpa] gi|2...   209   4e-52
emb|CAN73236.1| hypothetical protein VITISV_030092 [Vitis vinifera]   208   7e-52

>gb|AAA34085.1| DNA-binding protein [Nicotiana tabacum]
          Length = 380

 Score =  212 bits (540), Expect = 5e-53
 Identities = 120/212 (56%), Positives = 143/212 (67%), Gaps = 18/212 (8%)
 Frame = +2

Query: 86  PQAINLYPPS----QQANMMMESTSTPHHH---QTQMIVAAPGGGDATSS----EENTIK 232
           P +INLY       Q +N M+   +TP+ H     Q+++    GGD TSS      N +K
Sbjct: 6   PTSINLYEEQESMDQHSNHMIIEVATPNAHLQQPQQILLPGISGGDTTSSGGEDNNNNVK 65

Query: 233 XXXXXXXXPVKKRAETWVKEETRTLIMLRHEMDSLFNTSKSNKHLWDQISLKMREKGFDR 412
                     KKRAETWV+EETR LI LR E+DSLFNTSKSNKHLWDQISLKMREKGFDR
Sbjct: 66  LAP-------KKRAETWVQEETRALISLRRELDSLFNTSKSNKHLWDQISLKMREKGFDR 118

Query: 413 SPTMCTDKWRNLLKEFKKAK--QQENGVNHNGYSANSKMQFYKEVEEIIRDRNKN----- 571
           SPTMCTDKWRNLLKEFKKAK  Q+ NG        ++KM ++KE+EEI++ RNKN     
Sbjct: 119 SPTMCTDKWRNLLKEFKKAKHNQEPNG--------SAKMSYHKEIEEILKARNKNYKNPT 170

Query: 572 SKADSFMHFSDKGVEDTSIPFGPVEDNGRGAL 667
            K D+FM FS KG++DTSI FGPVE+NGR  L
Sbjct: 171 LKVDTFMQFSQKGLDDTSITFGPVEENGRPTL 202


>gb|AAB23811.1| Box II Factor, partial [Nicotiana tabacum] gi|404085|gb|AAA34054.1|
           DNA-binding protein, partial [Nicotiana tabacum]
          Length = 392

 Score =  212 bits (540), Expect = 5e-53
 Identities = 120/212 (56%), Positives = 143/212 (67%), Gaps = 18/212 (8%)
 Frame = +2

Query: 86  PQAINLYPPS----QQANMMMESTSTPHHH---QTQMIVAAPGGGDATSS----EENTIK 232
           P +INLY       Q +N M+   +TP+ H     Q+++    GGD TSS      N +K
Sbjct: 18  PTSINLYEEQESMDQHSNHMIIEVATPNAHLQQPQQILLPGISGGDTTSSGGEDNNNNVK 77

Query: 233 XXXXXXXXPVKKRAETWVKEETRTLIMLRHEMDSLFNTSKSNKHLWDQISLKMREKGFDR 412
                     KKRAETWV+EETR LI LR E+DSLFNTSKSNKHLWDQISLKMREKGFDR
Sbjct: 78  LAP-------KKRAETWVQEETRALISLRRELDSLFNTSKSNKHLWDQISLKMREKGFDR 130

Query: 413 SPTMCTDKWRNLLKEFKKAK--QQENGVNHNGYSANSKMQFYKEVEEIIRDRNKN----- 571
           SPTMCTDKWRNLLKEFKKAK  Q+ NG        ++KM ++KE+EEI++ RNKN     
Sbjct: 131 SPTMCTDKWRNLLKEFKKAKHNQEPNG--------SAKMSYHKEIEEILKARNKNYKNPT 182

Query: 572 SKADSFMHFSDKGVEDTSIPFGPVEDNGRGAL 667
            K D+FM FS KG++DTSI FGPVE+NGR  L
Sbjct: 183 LKVDTFMQFSQKGLDDTSITFGPVEENGRPTL 214


>prf||2103313A GT1a protein
          Length = 380

 Score =  212 bits (540), Expect = 5e-53
 Identities = 120/212 (56%), Positives = 143/212 (67%), Gaps = 18/212 (8%)
 Frame = +2

Query: 86  PQAINLYPPS----QQANMMMESTSTPHHH---QTQMIVAAPGGGDATSS----EENTIK 232
           P +INLY       Q +N M+   +TP+ H     Q+++    GGD TSS      N +K
Sbjct: 6   PTSINLYEEQESMDQHSNHMIIEVATPNAHLQQPQQILLPGISGGDTTSSGGEDNNNNVK 65

Query: 233 XXXXXXXXPVKKRAETWVKEETRTLIMLRHEMDSLFNTSKSNKHLWDQISLKMREKGFDR 412
                     KKRAETWV+EETR LI LR E+DSLFNTSKSNKHLWDQISLKMREKGFDR
Sbjct: 66  LAP-------KKRAETWVQEETRALISLRRELDSLFNTSKSNKHLWDQISLKMREKGFDR 118

Query: 413 SPTMCTDKWRNLLKEFKKAK--QQENGVNHNGYSANSKMQFYKEVEEIIRDRNKN----- 571
           SPTMCTDKWRNLLKEFKKAK  Q+ NG        ++KM ++KE+EEI++ RNKN     
Sbjct: 119 SPTMCTDKWRNLLKEFKKAKHNQEPNG--------SAKMSYHKEIEEILKARNKNYKNPT 170

Query: 572 SKADSFMHFSDKGVEDTSIPFGPVEDNGRGAL 667
            K D+FM FS KG++DTSI FGPVE+NGR  L
Sbjct: 171 LKVDTFMQFSQKGLDDTSITFGPVEENGRPTL 202


>ref|XP_002315635.1| predicted protein [Populus trichocarpa] gi|222864675|gb|EEF01806.1|
           predicted protein [Populus trichocarpa]
          Length = 384

 Score =  209 bits (532), Expect = 4e-52
 Identities = 118/224 (52%), Positives = 148/224 (66%), Gaps = 24/224 (10%)
 Frame = +2

Query: 68  MFSPAKPQAINLYP----PSQQANMMMESTST-----PHHHQT-------QMIVAAPGGG 199
           M+S  KP+ ++ Y     PS + NM++E  S+     PHH  T       QMI+     G
Sbjct: 1   MYSSEKPRPLDFYKEEVTPSSRDNMIIEVVSSNGDLPPHHLPTTTNTNPHQMIL-----G 55

Query: 200 DATSSEENTIKXXXXXXXXPVKKRAETWVKEETRTLIMLRHEMDSLFNTSKSNKHLWDQI 379
           D++  + + +K          KKRAETWV++ETR+LI LR EMD LFNTSKSNKHLW+QI
Sbjct: 56  DSSGDDNHEVKAP--------KKRAETWVQDETRSLIGLRREMDGLFNTSKSNKHLWEQI 107

Query: 380 SLKMREKGFDRSPTMCTDKWRNLLKEFKKAKQQENGVNHNGYSANSKMQFYKEVEEIIRD 559
           S KMREKGFDRSPTMCTDKWRNLLKEFKKAK ++ G      S ++KM +YKE++EI+R+
Sbjct: 108 SAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHKDRG------SGSAKMSYYKEIDEILRE 161

Query: 560 RNKN--------SKADSFMHFSDKGVEDTSIPFGPVEDNGRGAL 667
           RNKN        SK DS+M F+DKG EDTSI FGPVE + R  L
Sbjct: 162 RNKNPQYKSPIPSKVDSYMQFADKGFEDTSISFGPVEASPRPTL 205


>emb|CAN73236.1| hypothetical protein VITISV_030092 [Vitis vinifera]
          Length = 384

 Score =  208 bits (530), Expect = 7e-52
 Identities = 115/211 (54%), Positives = 145/211 (68%), Gaps = 11/211 (5%)
 Frame = +2

Query: 68  MFSPAKPQAINLYPPSQQA-NMMMESTSTPH--HHQTQMIVAAPGGGDATSSEENTIKXX 238
           M+ P KP+ ++ Y   ++  +MM+E  S     H Q QMI+     GD+ S E++  K  
Sbjct: 1   MYLPEKPRPLDFYKEEEEGRDMMIEVVSNGGLPHQQQQMIL-----GDS-SGEDHEPKAP 54

Query: 239 XXXXXXPVKKRAETWVKEETRTLIMLRHEMDSLFNTSKSNKHLWDQISLKMREKGFDRSP 418
                   KKRAETWV++ETR+LI  R +MD LFNTSKSNKHLW+QIS KMREKGFDRSP
Sbjct: 55  --------KKRAETWVQDETRSLIAFRRDMDCLFNTSKSNKHLWEQISAKMREKGFDRSP 106

Query: 419 TMCTDKWRNLLKEFKKAKQQENGVNHNGYSANSKMQFYKEVEEIIRDRNKN--------S 574
           TMCTDKWRNLLKEFKKAK Q+ G      S ++KM +YKE+EEI+++R+KN        S
Sbjct: 107 TMCTDKWRNLLKEFKKAKHQDRG------SGSAKMSYYKEIEEILKERSKNAHYKSPTMS 160

Query: 575 KADSFMHFSDKGVEDTSIPFGPVEDNGRGAL 667
           K D F+ FSDKG++DTSIPFGPVE +GR  L
Sbjct: 161 KVDPFIQFSDKGIDDTSIPFGPVEASGRPTL 191


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