BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00006867
         (725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum...   379   e-103
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub...   377   e-102
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode...   373   e-101
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ...   367   2e-99
gb|ABG29321.1| DNA-directed RNA polymerase, putative [Solanum bu...   363   3e-98

>gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum lycopersicum]
          Length = 1123

 Score =  379 bits (972), Expect = e-103
 Identities = 183/242 (75%), Positives = 209/242 (86%), Gaps = 1/242 (0%)
 Frame = +2

Query: 2    VQNLHKIKTLKGGGYSFQDLLDNGVVELIGPEEEEDCRTAWEIKYLFLENDGHDPAKYTH 181
            V NL KIK LKGG Y FQ LLDNG++ELIGPEEEEDCRTAW ++Y+   +  + PAKYTH
Sbjct: 666  VSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYILKADKENPPAKYTH 725

Query: 182  CELDMSVMLGLSCGIIPFANHDHAKRVLFQSQKHSQQAIGYSCTNPDIRVDTLSHQLFYP 361
            CELDMS +LGLSCGIIPFANHDHA+RVL+QS+KHSQQAIG+S  NP+ RVDT +HQL+YP
Sbjct: 726  CELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNNRVDTNTHQLYYP 785

Query: 362  QRPLFKTMLSDCLEKPG-QESLKRMIPRPEFYNGQCAIVAVNVHLGYNQEDSLVMNRASL 538
            QRPLF+TML+D L KP   +  K M+PRPE++NGQCAIVAVNVHLGYNQEDSLVMNRASL
Sbjct: 786  QRPLFRTMLADSLGKPKCAQYQKGMLPRPEYFNGQCAIVAVNVHLGYNQEDSLVMNRASL 845

Query: 539  DRGMFRSEHIRSYKAEVDNTEVKGKKIKSSDDAVNFGKIQSKIGRVDSLDDDGFPFIGAN 718
            +RGMFRSEH+RSYKAEVDN E   KK+K  +D+VNFGK QSKIGRVDSLDDDGFPFIGAN
Sbjct: 846  ERGMFRSEHVRSYKAEVDNKEAMAKKLK-IEDSVNFGKTQSKIGRVDSLDDDGFPFIGAN 904

Query: 719  LQ 724
            LQ
Sbjct: 905  LQ 906


>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
            vinifera]
          Length = 1198

 Score =  377 bits (968), Expect = e-102
 Identities = 186/244 (76%), Positives = 212/244 (86%), Gaps = 3/244 (1%)
 Frame = +2

Query: 2    VQNLHKIKTLKGGGYSFQDLLDNGVVELIGPEEEEDCRTAWEIKYLFLENDGHD--PAKY 175
            V+NL K+KT KG  ++FQ LLD G+VELIG EEEEDC TAW IKYL     GHD  P KY
Sbjct: 653  VENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWGIKYLL---KGHDDPPVKY 709

Query: 176  THCELDMSVMLGLSCGIIPFANHDHAKRVLFQSQKHSQQAIGYSCTNPDIRVDTLSHQLF 355
            THCELDMS +LGLSCGIIP+ANHDHA+RVL+QS+KHSQQAIG+S TNP+IRVDTLSHQL+
Sbjct: 710  THCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQLY 769

Query: 356  YPQRPLFKTMLSDCLEKPG-QESLKRMIPRPEFYNGQCAIVAVNVHLGYNQEDSLVMNRA 532
            YPQRPLF+TM+SDCL KPG  E  K ++PRPE++NGQ AIVAVNVHLGYNQEDSLVMNRA
Sbjct: 770  YPQRPLFRTMISDCLGKPGYSEGHKGIVPRPEYFNGQIAIVAVNVHLGYNQEDSLVMNRA 829

Query: 533  SLDRGMFRSEHIRSYKAEVDNTEVKGKKIKSSDDAVNFGKIQSKIGRVDSLDDDGFPFIG 712
            SL+RGMFRSEHIRSYK+EVDN E   KK + S+D+V+FGK+QSKIGRVDSLDDDGFPFIG
Sbjct: 830  SLERGMFRSEHIRSYKSEVDNNESLDKK-RKSEDSVHFGKMQSKIGRVDSLDDDGFPFIG 888

Query: 713  ANLQ 724
            ANLQ
Sbjct: 889  ANLQ 892


>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron macrophyllum]
          Length = 1019

 Score =  373 bits (958), Expect = e-101
 Identities = 182/242 (75%), Positives = 207/242 (85%), Gaps = 1/242 (0%)
 Frame = +2

Query: 2    VQNLHKIKTLKGGGYSFQDLLDNGVVELIGPEEEEDCRTAWEIKYLFLENDGHDPAKYTH 181
            V+NL KIK  KGG YSFQ LLD GV+E IG EEEEDCRTAW I YLF+EN+     KYTH
Sbjct: 473  VENLGKIKASKGGDYSFQSLLDKGVIEFIGTEEEEDCRTAWGINYLFMENEAKATVKYTH 532

Query: 182  CELDMSVMLGLSCGIIPFANHDHAKRVLFQSQKHSQQAIGYSCTNPDIRVDTLSHQLFYP 361
            CELDMS +LGLS  IIPFANHDHA+RVL+QS+KHSQQA+G++ TNP+IRVDT +HQL+YP
Sbjct: 533  CELDMSFLLGLSAAIIPFANHDHARRVLYQSEKHSQQAMGFNTTNPNIRVDTNTHQLYYP 592

Query: 362  QRPLFKTMLSDCLEKPGQE-SLKRMIPRPEFYNGQCAIVAVNVHLGYNQEDSLVMNRASL 538
            QRPLF+TM+SDCL KPG       ++PR E++NGQCAIVAVNVHLGYNQEDSLVMNRASL
Sbjct: 593  QRPLFRTMVSDCLGKPGYPLGHNGIVPRAEYFNGQCAIVAVNVHLGYNQEDSLVMNRASL 652

Query: 539  DRGMFRSEHIRSYKAEVDNTEVKGKKIKSSDDAVNFGKIQSKIGRVDSLDDDGFPFIGAN 718
            +RGMFRSEHIRSYKA+VDN E  GKK K  +D+VNFGK+QSKIGRVDSLDDDGFPFIGAN
Sbjct: 653  ERGMFRSEHIRSYKADVDNKESVGKKPK-FEDSVNFGKVQSKIGRVDSLDDDGFPFIGAN 711

Query: 719  LQ 724
            LQ
Sbjct: 712  LQ 713


>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
            gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
            subunit, putative [Ricinus communis]
          Length = 1203

 Score =  367 bits (941), Expect = 2e-99
 Identities = 179/242 (73%), Positives = 202/242 (83%), Gaps = 1/242 (0%)
 Frame = +2

Query: 2    VQNLHKIKTLKGGGYSFQDLLDNGVVELIGPEEEEDCRTAWEIKYLFLENDGHDPAKYTH 181
            VQNLHKI+  KGG  +FQ LLD G++E +G EEEEDC TAW IK+L    DG    KYTH
Sbjct: 657  VQNLHKIEAFKGGNCTFQSLLDKGIIEFVGTEEEEDCSTAWGIKFLLSGVDGKQSLKYTH 716

Query: 182  CELDMSVMLGLSCGIIPFANHDHAKRVLFQSQKHSQQAIGYSCTNPDIRVDTLSHQLFYP 361
            CELDMS +LGLSCGIIPFANHDHA+RVL+Q+QKHSQQAIG+  TNP+IRVDTLSHQL+YP
Sbjct: 717  CELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTNPNIRVDTLSHQLYYP 776

Query: 362  QRPLFKTMLSDCLEKPGQ-ESLKRMIPRPEFYNGQCAIVAVNVHLGYNQEDSLVMNRASL 538
            QRPLF+T+ SDCL KPG       ++P+PE YNGQ AIVAVNVHLGYNQEDSLVMNRASL
Sbjct: 777  QRPLFRTVTSDCLGKPGDTRGHNGIVPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRASL 836

Query: 539  DRGMFRSEHIRSYKAEVDNTEVKGKKIKSSDDAVNFGKIQSKIGRVDSLDDDGFPFIGAN 718
            +RGMFRSEHIRSYKA+VDN E+  K+ +  DD VNFGKI SKIGRVDSLDDDGFPFIGAN
Sbjct: 837  ERGMFRSEHIRSYKADVDNKELLDKR-RKYDDNVNFGKIPSKIGRVDSLDDDGFPFIGAN 895

Query: 719  LQ 724
            LQ
Sbjct: 896  LQ 897


>gb|ABG29321.1| DNA-directed RNA polymerase, putative [Solanum bulbocastanum]
          Length = 1018

 Score =  363 bits (931), Expect = 3e-98
 Identities = 180/246 (73%), Positives = 202/246 (82%), Gaps = 5/246 (2%)
 Frame = +2

Query: 2    VQNLHKIKTLK----GGGYSFQDLLDNGVVELIGPEEEEDCRTAWEIKYLFLENDGHDPA 169
            V NL  IK LK    GG Y FQ LLD G++ELIGPEEEEDCRTAW ++YL   +  + P 
Sbjct: 699  VSNLKNIKALKDGMKGGDYGFQTLLDKGIIELIGPEEEEDCRTAWGVEYLLKADKENPPV 758

Query: 170  KYTHCELDMSVMLGLSCGIIPFANHDHAKRVLFQSQKHSQQAIGYSCTNPDIRVDTLSHQ 349
             YTHCELDMS +LGLSCG+IPFANHDHA+RVL+QS+KHSQQAIG+S  NP+ RVDT +HQ
Sbjct: 759  NYTHCELDMSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNARVDTNTHQ 818

Query: 350  LFYPQRPLFKTMLSDCLEKPG-QESLKRMIPRPEFYNGQCAIVAVNVHLGYNQEDSLVMN 526
            L+YPQRPLF TMLSD L KP      K M+ RPE+YNGQCAIVAVNVHLGYNQEDS+VMN
Sbjct: 819  LYYPQRPLFGTMLSDSLGKPKCARHQKGMLSRPEYYNGQCAIVAVNVHLGYNQEDSVVMN 878

Query: 527  RASLDRGMFRSEHIRSYKAEVDNTEVKGKKIKSSDDAVNFGKIQSKIGRVDSLDDDGFPF 706
            RASL+RGMFRSEH+RSYKAEVDN E  GKK K  +D+VNFGK QSKIGRVDSLDDDGFPF
Sbjct: 879  RASLERGMFRSEHVRSYKAEVDNKEAMGKKSK-VEDSVNFGKTQSKIGRVDSLDDDGFPF 937

Query: 707  IGANLQ 724
            IGANLQ
Sbjct: 938  IGANLQ 943