BLASTX nr result

ID: Atractylodes22_contig00006831 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00006831
         (1248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271253.1| PREDICTED: RING-H2 finger protein ATL2-like ...   163   7e-38
ref|XP_002516957.1| ring finger protein, putative [Ricinus commu...   163   1e-37
ref|XP_002271292.1| PREDICTED: RING-H2 finger protein ATL2-like ...   162   2e-37
ref|XP_002328624.1| predicted protein [Populus trichocarpa] gi|2...   156   1e-35
gb|AEI72266.1| ring zinc finger transcription factor [Citrus tri...   154   6e-35

>ref|XP_002271253.1| PREDICTED: RING-H2 finger protein ATL2-like isoform 1 [Vitis
            vinifera]
          Length = 317

 Score =  163 bits (413), Expect = 7e-38
 Identities = 108/306 (35%), Positives = 140/306 (45%), Gaps = 22/306 (7%)
 Frame = -3

Query: 1105 DLEGESSSNNYALSGKIMLASXXXXXXXXXXXXXLHLYARWYLVRLQXXXXXXXXXXXXX 926
            D    +++  YALSGKIML++             LH+YARWYL R +             
Sbjct: 10   DWSANNAATGYALSGKIMLSAIVILFAVVVLMVCLHIYARWYLYRTRRRHHARARRRHH- 68

Query: 925  XXRIIFYLDPDR---GLAVPTGGLDASLLNSLPLFIYSSETDGKMPECAVCLSEFEDGEK 755
               ++FY+DP      ++ PT GLDAS+LNSLP+F+YSS+T   M ECAVCLSEFE+ EK
Sbjct: 69   ---LVFYVDPTNPAASVSSPTRGLDASILNSLPVFVYSSKTHTDMSECAVCLSEFEENEK 125

Query: 754  GRTLPKCKHSFHTECIDMWFHSNSTCPLCRAPVEPVESEMTIIVXXXXXXXXXXXXXXXX 575
            GR LPKC HSFH  CIDMWFHS+STCPLCR+ V    SE                     
Sbjct: 126  GRRLPKCNHSFHIGCIDMWFHSHSTCPLCRSAVNAETSESASRNPTDVVISMAETEGGST 185

Query: 574  XXXXPGVEHGE-------------TTSLADRRKGID---VRIDVPSRNETVA---DNDFR 452
                   +H E             ++S+  RRK  +   V I+VP RNE      D    
Sbjct: 186  SALCSTCQHDEDRTGRLRTSSSVGSSSVGSRRKSSELAGVSIEVPRRNENFGLSEDESLL 245

Query: 451  LQXXXXXXXXXXXSLLYLKRILSMSLKXXXXXXXXXXXXSCLPVAAESDLESARQESAHE 272
                          +L LKRILS   K                   E+D+E   +++   
Sbjct: 246  DSPATRVQKSPGSRILSLKRILSRDRKSMLSPTSVPGVSCGSVTEFEADIERGTEDTQQI 305

Query: 271  STRPGP 254
             T+  P
Sbjct: 306  QTQTQP 311


>ref|XP_002516957.1| ring finger protein, putative [Ricinus communis]
            gi|223544045|gb|EEF45571.1| ring finger protein, putative
            [Ricinus communis]
          Length = 292

 Score =  163 bits (412), Expect = 1e-37
 Identities = 94/215 (43%), Positives = 119/215 (55%), Gaps = 6/215 (2%)
 Frame = -3

Query: 1090 SSSNNYALSGKIMLASXXXXXXXXXXXXXLHLYARWYLVRLQXXXXXXXXXXXXXXXRII 911
            S++  YALSGKIML++             LHLYARWYL+  +                +I
Sbjct: 13   STTKGYALSGKIMLSAIIILFFVVIMMVCLHLYARWYLLNARRRQHRRARNRRAH---LI 69

Query: 910  FYLDPDRG--LAVPTGGLDASLLNSLPLFIYSSETDGKMPECAVCLSEFEDGEKGRTLPK 737
            FY+DP     + VP+ GLDA++LN+LP+F YSS+T     ECAVCLSEFE+ E+GRTLPK
Sbjct: 70   FYVDPSNANNVTVPSRGLDAAVLNTLPVFAYSSKTHPDPIECAVCLSEFEENERGRTLPK 129

Query: 736  CKHSFHTECIDMWFHSNSTCPLCRAPVEPVESEMTIIVXXXXXXXXXXXXXXXXXXXXPG 557
            C HSFH ECIDMWFHS+STCPLCR+ VEPV  +   +                       
Sbjct: 130  CNHSFHIECIDMWFHSHSTCPLCRSAVEPVPEDSVRVNSEINETGSRAGLCVTCQHEENR 189

Query: 556  VEH-GETTSLADRRKG---IDVRIDVPSRNETVAD 464
            V+    T+S   RRK    + V I+VP RN    D
Sbjct: 190  VDGVASTSSFNGRRKPAEFVGVTIEVPRRNGVFED 224


>ref|XP_002271292.1| PREDICTED: RING-H2 finger protein ATL2-like isoform 2 [Vitis
            vinifera]
          Length = 320

 Score =  162 bits (410), Expect = 2e-37
 Identities = 110/319 (34%), Positives = 143/319 (44%), Gaps = 22/319 (6%)
 Frame = -3

Query: 1144 GTTHDSPNNRQWRDLEGESSSNNYALSGKIMLASXXXXXXXXXXXXXLHLYARWYLVRLQ 965
            G      + R W      +++  YALSGKIML++             LH+YARWYL R +
Sbjct: 2    GVIQFEKSQRLWGS--ANNAATGYALSGKIMLSAIVILFAVVVLMVCLHIYARWYLYRTR 59

Query: 964  XXXXXXXXXXXXXXXRIIFYLDPDR---GLAVPTGGLDASLLNSLPLFIYSSETDGKMPE 794
                            ++FY+DP      ++ PT GLDAS+LNSLP+F+YSS+T   M E
Sbjct: 60   RRHHARARRRHH----LVFYVDPTNPAASVSSPTRGLDASILNSLPVFVYSSKTHTDMSE 115

Query: 793  CAVCLSEFEDGEKGRTLPKCKHSFHTECIDMWFHSNSTCPLCRAPVEPVESEMTIIVXXX 614
            CAVCLSEFE+ EKGR LPKC HSFH  CIDMWFHS+STCPLCR+ V    SE        
Sbjct: 116  CAVCLSEFEENEKGRRLPKCNHSFHIGCIDMWFHSHSTCPLCRSAVNAETSESASRNPTD 175

Query: 613  XXXXXXXXXXXXXXXXXPGVEHGE-------------TTSLADRRKGID---VRIDVPSR 482
                                +H E             ++S+  RRK  +   V I+VP R
Sbjct: 176  VVISMAETEGGSTSALCSTCQHDEDRTGRLRTSSSVGSSSVGSRRKSSELAGVSIEVPRR 235

Query: 481  NETVA---DNDFRLQXXXXXXXXXXXSLLYLKRILSMSLKXXXXXXXXXXXXSCLPVAAE 311
            NE      D                  +L LKRILS   K                   E
Sbjct: 236  NENFGLSEDESLLDSPATRVQKSPGSRILSLKRILSRDRKSMLSPTSVPGVSCGSVTEFE 295

Query: 310  SDLESARQESAHESTRPGP 254
            +D+E   +++    T+  P
Sbjct: 296  ADIERGTEDTQQIQTQTQP 314


>ref|XP_002328624.1| predicted protein [Populus trichocarpa] gi|222838606|gb|EEE76971.1|
            predicted protein [Populus trichocarpa]
          Length = 293

 Score =  156 bits (394), Expect = 1e-35
 Identities = 92/211 (43%), Positives = 111/211 (52%), Gaps = 7/211 (3%)
 Frame = -3

Query: 1075 YALSGKIMLASXXXXXXXXXXXXXLHLYARWYLVRLQXXXXXXXXXXXXXXXRIIFYLD- 899
            YALSGKIML++             LHLYARWYL R +                ++FY+D 
Sbjct: 16   YALSGKIMLSAIVILFFVVILMVFLHLYARWYLTRARQRQVRRVRNRRTH---LVFYVDS 72

Query: 898  ---PDRGLAVPTGGLDASLLNSLPLFIYSSETDGKMPECAVCLSEFEDGEKGRTLPKCKH 728
               P+   +  T GL+ ++ NSLP+F+YS +T     ECAVCLSEFE+ E+GR LPKC H
Sbjct: 73   AQDPNNVTSHVTRGLEETVKNSLPVFVYSRKTHQDSIECAVCLSEFEENERGRVLPKCNH 132

Query: 727  SFHTECIDMWFHSNSTCPLCRAPVEPVESEMTIIVXXXXXXXXXXXXXXXXXXXXPGVEH 548
            SFHTECIDMWFHS+STCPLCR+PVEPV                              V  
Sbjct: 133  SFHTECIDMWFHSHSTCPLCRSPVEPVAENPVPEGSNFGISEAGSGLCTSCQHEEDHVGS 192

Query: 547  GETTSLADRRKG---IDVRIDVPSRNETVAD 464
              T+S  D RK    I V IDVP RN    D
Sbjct: 193  ASTSSFNDGRKPVGLIGVTIDVPRRNGNFED 223


>gb|AEI72266.1| ring zinc finger transcription factor [Citrus trifoliata]
          Length = 234

 Score =  154 bits (388), Expect = 6e-35
 Identities = 79/157 (50%), Positives = 97/157 (61%), Gaps = 1/157 (0%)
 Frame = -3

Query: 1105 DLEGESSSNN-YALSGKIMLASXXXXXXXXXXXXXLHLYARWYLVRLQXXXXXXXXXXXX 929
            D  G +S N  YALSG+IML+S             LHLYARWYLV+ +            
Sbjct: 6    DPRGSNSDNRGYALSGRIMLSSIVILFFVVILMVCLHLYARWYLVQARRRQVRRHRHRRT 65

Query: 928  XXXRIIFYLDPDRGLAVPTGGLDASLLNSLPLFIYSSETDGKMPECAVCLSEFEDGEKGR 749
                 +FY+DP    A  + GLD+S+L SLP+F+YSS+T     +CAVCLSEFE+ E GR
Sbjct: 66   Q---FVFYVDPTNPSATSSRGLDSSVLKSLPVFVYSSKTHADAMDCAVCLSEFEENESGR 122

Query: 748  TLPKCKHSFHTECIDMWFHSNSTCPLCRAPVEPVESE 638
             LP C HSFH  CIDMWFHS+STCPLCR PVE V ++
Sbjct: 123  VLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVELVTAQ 159


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