BLASTX nr result

ID: Atractylodes22_contig00006744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00006744
         (1289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39533.3| unnamed protein product [Vitis vinifera]              100   6e-19
ref|NP_178336.1| F-box protein PP2-B5 [Arabidopsis thaliana] gi|...    78   4e-12
ref|XP_002318973.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-11
ref|XP_002334203.1| predicted protein [Populus trichocarpa] gi|2...    74   6e-11
ref|XP_002876807.1| phloem protein 2-B2 [Arabidopsis lyrata subs...    74   1e-10

>emb|CBI39533.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score =  100 bits (250), Expect = 6e-19
 Identities = 96/362 (26%), Positives = 152/362 (41%), Gaps = 13/362 (3%)
 Frame = +3

Query: 6    WEMKLPPDWEVIIKILNIPRAIYTVKKELFSYLHKGILFDESNKLFWIND-NGKKCMFIS 182
            WE  LP D+  I+  L  P  + + KKELF  L    L D   K F ++  +GK    +S
Sbjct: 307  WERFLPADYHDILSRLAEPLVVSS-KKELFLRLCDPSLIDGGKKRFRLDKWSGKNSYMMS 365

Query: 183  ARRFLEAINTTWVFQRDYWRFLRVAEFSYQEFHDIKC--------QIKATMLSLGTMYAA 338
            AR     ++ +W     +W +  + E  + E  ++K         +I+  MLS  T Y A
Sbjct: 366  ARE----LSISWSHDPTHWSWTSIPESRFSEVAELKTVCRLEIHGKIRTQMLSPNTKYGA 421

Query: 339  SLVFK-NDWQPNVDLKPSRLITVKWKMEDLSVYSTHVAELTADNWYKIKMWNFINHVPDA 515
             L+ K ++    +DL PS +         +            D W ++++ +F N   D 
Sbjct: 422  YLIIKISNRAFGLDLMPSEISVEVSNSTQVCDGRVPCERRDGDGWMELELGDFFNGEGDE 481

Query: 516  DFDIVIEQLSDLKNPTKCCIFIQGIDFRPIEMMQHEENEEFKTPSTSEEVDTDEDVYWEK 695
            + +  +        P  C   I       +      +       ST+     D D  WEK
Sbjct: 482  EMNFELL-------PQDCISHI-------LSCTSPRDACRSGLVSTTVRHAGDSDSVWEK 527

Query: 696  RLPNDYQRCIQVSDKPLNYTSKKELYFLLCAGFIGYSGKLWFSLCKSTNGICSMLPAVEI 875
             LP+DYQ  +     PL + SKKELY  LC   +   G+  FS+ K+T      L A  +
Sbjct: 528  FLPSDYQEILSRLVSPLVFASKKELYSKLCRPLLIDEGRKSFSISKTTGEKGYTLSARNL 587

Query: 876  ---LSHDCHYKSLETLSLSESRFGEVKKLQDIRSYDCVCRLQSLIFSPQHIYTCYLVFKF 1046
                S +  Y S +   L +SRF E  +L+ I   +   ++ + + SP+  Y  YL+ KF
Sbjct: 588  SITWSSNALYWSWK--PLLQSRFAETVELRTICWLEIQGKISTCMLSPKTTYRAYLIVKF 645

Query: 1047 TD 1052
             D
Sbjct: 646  AD 647



 Score = 95.5 bits (236), Expect = 3e-17
 Identities = 105/392 (26%), Positives = 171/392 (43%), Gaps = 43/392 (10%)
 Frame = +3

Query: 6    WEMKLPPDWEVIIKILNIPRAIYTVKKELFSYLHKGILFDESNKLFWIND-NGKKCMFIS 182
            WE  LP D+  I+  L  P  + + +KELF  L   IL D  +K F ++  +GKK   +S
Sbjct: 46   WERFLPADYHDILCRLVEP-LVCSSRKELFLRLCDPILIDGGSKSFRLDKWSGKKSYLLS 104

Query: 183  ARRFLEAINTTWVFQRDYW--------RFLRVAEFSYQEFHDIKCQIKATMLSLGTMYAA 338
            AR     ++ TW     YW        RF  VAE     + +I  +I+  MLS  T Y A
Sbjct: 105  ARE----LSITWSNDPMYWSWRSTPESRFSHVAELRTMCWLEIHGKIRTQMLSPNTKYGA 160

Query: 339  SLVFK-NDWQPNVDLKPSRLITVKWKMEDLSVYST------HVAELTADNWYKIKMWNFI 497
             L+ K ++    +DL PS  I+V+       + S        V     D W ++++ +F 
Sbjct: 161  YLIMKISNRAYGLDLMPSE-ISVEVSNSTQMLRSRVIEGDGRVPCEREDGWMELELGDFF 219

Query: 498  NHVPDADF--------------DIVIEQLSDLKNPTKCC---IFIQGIDFRP-------I 605
            N   D +                ++IE +   +     C   ++  G++  P       +
Sbjct: 220  NGEGDEEVRMSLREVKGYHLKGGLIIEGIEVRQRAITYCFTMVYCVGLNTLPEGCVSTIL 279

Query: 606  EMMQHEENEEFKTPSTSEEVDTDEDVYWEKRLPNDYQRCIQVSDKPLNYTSKKELYFLLC 785
             +    +  +    S+      + DV WE+ LP DY   +    +PL  +SKKEL+  LC
Sbjct: 280  SLTSPPDACKSSLVSSIFRAAAESDVVWERFLPADYHDILSRLAEPLVVSSKKELFLRLC 339

Query: 786  AGFIGYSGKLWFSLCKSTNGICSMLPAVEI---LSHDCHYKSLETLSLSESRFGEVKKLQ 956
               +   GK  F L K +     M+ A E+    SHD  + S    S+ ESRF EV +L+
Sbjct: 340  DPSLIDGGKKRFRLDKWSGKNSYMMSARELSISWSHDPTHWS--WTSIPESRFSEVAELK 397

Query: 957  DIRSYDCVCRLQSLIFSPQHIYTCYLVFKFTD 1052
             +   +   ++++ + SP   Y  YL+ K ++
Sbjct: 398  TVCRLEIHGKIRTQMLSPNTKYGAYLIIKISN 429


>ref|NP_178336.1| F-box protein PP2-B5 [Arabidopsis thaliana]
            gi|75274863|sp|Q9ZVR1.1|PP2B5_ARATH RecName: Full=F-box
            protein PP2-B5; AltName: Full=Protein PHLOEM PROTEIN
            2-LIKE B5; Short=AtPP2-B5 gi|3894163|gb|AAC78513.1|
            putative phloem-specific lectin [Arabidopsis thaliana]
            gi|28207170|gb|AAO37225.1| hypothetical protein
            [Arabidopsis thaliana] gi|109946445|gb|ABG48401.1|
            At2g02300 [Arabidopsis thaliana]
            gi|330250470|gb|AEC05564.1| F-box protein PP2-B5
            [Arabidopsis thaliana]
          Length = 284

 Score = 78.2 bits (191), Expect = 4e-12
 Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 2/166 (1%)
 Frame = +3

Query: 648  STSEEVDTDEDVYWEKRLPN-DYQRCIQVSDKPLNYTSKKELYFLLCAGFIGYSGKLWFS 824
            S S  +  + D  WEK LP  DY   + +  K   ++SKKELYF LC  F  ++GK+ F 
Sbjct: 62   SKSFGLQFNSDSVWEKFLPPPDY---VSLLPKSRVFSSKKELYFALCDPFPNHNGKMSFR 118

Query: 825  LCKSTNGICSMLPAVEIL-SHDCHYKSLETLSLSESRFGEVKKLQDIRSYDCVCRLQSLI 1001
            L K++   C ML A ++L S   + K  + +S+ ESRF EV +L +I S+D    L + I
Sbjct: 119  LDKASGKKCVMLSAKKLLISRVVNPKYWKWISIPESRFDEVPELLNIDSFDIRGVLNTRI 178

Query: 1002 FSPQHIYTCYLVFKFTDNFQHAHVRSLRAICHLDNQHISTSFSKMN 1139
             SP   Y+ Y+V+  T +F       ++A        +S +F + +
Sbjct: 179  ISPGTHYSAYIVYTKTSHFNGFQTSPIQAGVGFQRHGMSKTFIRFD 224


>ref|XP_002318973.1| predicted protein [Populus trichocarpa] gi|222857349|gb|EEE94896.1|
            predicted protein [Populus trichocarpa]
          Length = 287

 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 62/215 (28%), Positives = 95/215 (44%), Gaps = 1/215 (0%)
 Frame = +3

Query: 648  STSEEVDTDEDVYWEKRLPNDYQRCIQVSDKPLNYTSKKELYFLLCAGFIGYSGKLWFSL 827
            ST  +   D DV WE+ LP DYQ  +  S  P  ++SKKEL+ LLC   +   GK  F L
Sbjct: 37   STIFQAAADSDVVWERFLPTDYQDIVSRSMVPFKFSSKKELFLLLCNSLLIDGGKKSFKL 96

Query: 828  CKSTNGICSMLPAVEI-LSHDCHYKSLETLSLSESRFGEVKKLQDIRSYDCVCRLQSLIF 1004
             +S+     ML A ++ ++           SL ESRF EV  L+ +   + V  +++ + 
Sbjct: 97   ERSSGKKSFMLSARDLHITWSDESPYWHWASLPESRFSEVAVLRTMCWLEIVGMIKTQML 156

Query: 1005 SPQHIYTCYLVFKFTDNFQHAHVRSLRAICHLDNQHISTSFSKMNLIHPMNIPTIKPKND 1184
            +P   Y  YLV K TD      +        + N  +S + + + L              
Sbjct: 157  TPNTKYGAYLVLKITDRSYGLDLMPSEISVEVGNNQVSRNTAYLRLAKEHARKKQMESLF 216

Query: 1185 YGSHDSSNMPRIKSLGHMEYVEDGWIKQREDGWME 1289
            YG    + M  +KS   +   E     +R+DGW+E
Sbjct: 217  YG----NRMQVLKS--RVAEGEGRVPSERDDGWLE 245


>ref|XP_002334203.1| predicted protein [Populus trichocarpa] gi|222870034|gb|EEF07165.1|
            predicted protein [Populus trichocarpa]
          Length = 287

 Score = 74.3 bits (181), Expect = 6e-11
 Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 2/216 (0%)
 Frame = +3

Query: 648  STSEEVDTDEDVYWEKRLPNDYQRCIQVSDKPLNYTSKKELYFLLCAGFIGYSGKLWFSL 827
            ST  +   D D+ WE+ LP DYQ  +  S+ P  ++SKKEL+  LC   +   G+  F +
Sbjct: 37   STIFQSAADSDIVWERFLPTDYQDIVSKSNFPFKFSSKKELFLQLCNSLLIDGGRKSFRI 96

Query: 828  CKSTNGICSMLPAVEI-LSHDCHYKSLETLSLSESRFGEVKKLQDIRSYDCVCRLQSLIF 1004
             KS+     +L A ++ ++     +     SL ESRF EV  L+ +   + V ++++ + 
Sbjct: 97   EKSSGKKSFILSARDLHITWSNEPQYWHWASLPESRFSEVAVLRTMCWLEIVGKIETQML 156

Query: 1005 SPQHIYTCYLVFKFTDNFQHAHVRSLRAICHLDNQHISTSFSKMNLIHPMNIPTIKPKND 1184
            SP   Y  YL+ K ++               + N   ST+ + + L           +  
Sbjct: 157  SPNTKYGAYLILKISERSYGLDSMPSEISVEVGNNQGSTTTAYLRLAQEHARKQQMERLF 216

Query: 1185 YGSHDSSNMPRIKSLGHMEYVEDGWI-KQREDGWME 1289
            YG+       R+          DG +  +REDGW+E
Sbjct: 217  YGNRTERLKSRVAE-------GDGRVASEREDGWLE 245



 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 10/140 (7%)
 Frame = +3

Query: 6   WEMKLPPDWEVIIKILNIPRAIYTVKKELFSYLHKGILFDESNKLFWI-NDNGKKCMFIS 182
           WE  LP D++ I+   N P   ++ KKELF  L   +L D   K F I   +GKK   +S
Sbjct: 50  WERFLPTDYQDIVSKSNFPFK-FSSKKELFLQLCNSLLIDGGRKSFRIEKSSGKKSFILS 108

Query: 183 ARRFLEAINTTWVFQRDYWRFLRVAEFSYQE--------FHDIKCQIKATMLSLGTMYAA 338
           AR     ++ TW  +  YW +  + E  + E        + +I  +I+  MLS  T Y A
Sbjct: 109 AR----DLHITWSNEPQYWHWASLPESRFSEVAVLRTMCWLEIVGKIETQMLSPNTKYGA 164

Query: 339 SLVFK-NDWQPNVDLKPSRL 395
            L+ K ++    +D  PS +
Sbjct: 165 YLILKISERSYGLDSMPSEI 184


>ref|XP_002876807.1| phloem protein 2-B2 [Arabidopsis lyrata subsp. lyrata]
           gi|297322645|gb|EFH53066.1| phloem protein 2-B2
           [Arabidopsis lyrata subsp. lyrata]
          Length = 296

 Score = 73.6 bits (179), Expect = 1e-10
 Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 28/227 (12%)
 Frame = +3

Query: 6   WEMKLPPDWEVIIKILNIPRAIYTVKKEL-FSYLHKGILFDESNKLFWIND-NGKKCMFI 179
           W+  LPPD+  +I     P  +++ KKEL F+     +L D+  K FW+   NGKKC+ +
Sbjct: 76  WDKFLPPDYSSLIP----PLRVFSSKKELYFAICDNPVLIDDGKKSFWLEKGNGKKCIML 131

Query: 180 SARRFLEAINTTWVFQRDYWRFLRVAEFSYQE--------FHDIKCQIKATMLSLGTMYA 335
           S ++ +     TWV    YWR++ + E  ++E        + +++  +    LS  T Y+
Sbjct: 132 SPKKDMWI---TWVSTPQYWRWISIPEARFEEVPELLNVCWFEVRGGMSTKYLSPRTRYS 188

Query: 336 ASLVFK-NDWQPNVDLKPSRLIT--VKWKMEDLSVY-----------STHVAELTA---D 464
           A +VFK  D  PN+   P+      V        +Y            T V        D
Sbjct: 189 AYIVFKTKDRCPNLGDVPAEATVGLVGQASSQRFIYFVGPTNRGRERETRVVTKPTERKD 248

Query: 465 NWYKIKMWNFINHVPDADFDIVIEQLSDLKNP-TKCCIFIQGIDFRP 602
            W + ++  F N   ++  D V   + + K+P  K  + IQGI+FRP
Sbjct: 249 GWMEAELGEFFN---ESSCDEVATSILETKSPYWKRGLIIQGIEFRP 292


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