BLASTX nr result

ID: Atractylodes22_contig00006737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00006737
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524416.1| 60S acidic ribosomal protein P1, putative [R...   112   5e-23
ref|XP_002515071.1| 60S acidic ribosomal protein P1, putative [R...   106   2e-21
ref|XP_001772615.1| predicted protein [Physcomitrella patens sub...   105   6e-21
ref|NP_001105701.1| 60S acidic ribosomal protein P1 [Zea mays] g...   103   2e-20
ref|XP_002443766.1| hypothetical protein SORBIDRAFT_07g001570 [S...   103   2e-20

>ref|XP_002524416.1| 60S acidic ribosomal protein P1, putative [Ricinus communis]
           gi|223536300|gb|EEF37951.1| 60S acidic ribosomal protein
           P1, putative [Ricinus communis]
          Length = 110

 Score =  112 bits (280), Expect = 5e-23
 Identities = 60/110 (54%), Positives = 68/110 (61%)
 Frame = +1

Query: 10  MSIGELACTYACLILSDDGIPVTAEKIATILKAANVECQSYWPSLFAKLAEKKNIEDLIV 189
           M+ GELACTYA LIL DDGIPVT+EKIAT++KAANV  +SYWPSLFAKLAEKKNI+DL++
Sbjct: 1   MAAGELACTYATLILHDDGIPVTSEKIATLVKAANVAVESYWPSLFAKLAEKKNIDDLVM 60

Query: 190 NVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 339
           NV                                     SDDDMGFSLFD
Sbjct: 61  NVGSGGGAAPVAVSAPAAGAGAAAAAPAVEEKKEEPKEESDDDMGFSLFD 110


>ref|XP_002515071.1| 60S acidic ribosomal protein P1, putative [Ricinus communis]
           gi|223545551|gb|EEF47055.1| 60S acidic ribosomal protein
           P1, putative [Ricinus communis]
          Length = 113

 Score =  106 bits (265), Expect = 2e-21
 Identities = 57/113 (50%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
 Frame = +1

Query: 10  MSIGELACTYACLILSDDGIPVTAEKIATILKAANVECQSYWPSLFAKLAEKKNIEDLIV 189
           MS+GELAC+YA ++L DDGIP+TAEKIA ++KAANV+ +SYWPSLFAKLAEK+NIEDL++
Sbjct: 1   MSVGELACSYAVMVLHDDGIPITAEKIAQLVKAANVQIESYWPSLFAKLAEKRNIEDLVM 60

Query: 190 NV---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 339
           NV                                        SDDDMGFSLFD
Sbjct: 61  NVGSGGGGAPVAVAAPAGGAAAGGAAAAAPPPEEKKEEPQEESDDDMGFSLFD 113


>ref|XP_001772615.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162676170|gb|EDQ62657.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 110

 Score =  105 bits (262), Expect = 6e-21
 Identities = 54/110 (49%), Positives = 65/110 (59%)
 Frame = +1

Query: 10  MSIGELACTYACLILSDDGIPVTAEKIATILKAANVECQSYWPSLFAKLAEKKNIEDLIV 189
           MS+ ELACTYACLIL DDGI +TA+KIA+++KAANV  + YWPSLFAKL EK++++DLI 
Sbjct: 1   MSVSELACTYACLILHDDGIAITADKIASLVKAANVSVEGYWPSLFAKLCEKRSVDDLIT 60

Query: 190 NVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 339
           NV                                     SDDDMGFSLFD
Sbjct: 61  NVGGGKCGGAAVAVSAAPASSAADEAPQVEEKKEEPKEESDDDMGFSLFD 110


>ref|NP_001105701.1| 60S acidic ribosomal protein P1 [Zea mays]
           gi|2431769|gb|AAB71079.1| acidic ribosomal protein P1a
           [Zea mays] gi|195619428|gb|ACG31544.1| 60S acidic
           ribosomal protein P1 [Zea mays]
           gi|238014308|gb|ACR38189.1| unknown [Zea mays]
           gi|413941692|gb|AFW74341.1| acidic ribosomal protein P1a
           [Zea mays]
          Length = 109

 Score =  103 bits (258), Expect = 2e-20
 Identities = 57/110 (51%), Positives = 68/110 (61%)
 Frame = +1

Query: 10  MSIGELACTYACLILSDDGIPVTAEKIATILKAANVECQSYWPSLFAKLAEKKNIEDLIV 189
           M+ GELACTYA LILSDDGI +TAEKIATI+KAAN++ +SYWP+LFAKL EK+N+EDLI+
Sbjct: 1   MASGELACTYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLIL 60

Query: 190 NVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 339
           +V                                     SDDDMGFSLFD
Sbjct: 61  SV-GSGGGAAPVAAAAPAGGAAAAAAPAVEEKKEEAKEESDDDMGFSLFD 109


>ref|XP_002443766.1| hypothetical protein SORBIDRAFT_07g001570 [Sorghum bicolor]
           gi|241940116|gb|EES13261.1| hypothetical protein
           SORBIDRAFT_07g001570 [Sorghum bicolor]
          Length = 109

 Score =  103 bits (258), Expect = 2e-20
 Identities = 57/110 (51%), Positives = 68/110 (61%)
 Frame = +1

Query: 10  MSIGELACTYACLILSDDGIPVTAEKIATILKAANVECQSYWPSLFAKLAEKKNIEDLIV 189
           M+ GELACTYA LILSDDGI +TAEKIATI+KAAN++ +SYWP+LFAKL EK+N+EDLI+
Sbjct: 1   MASGELACTYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLIL 60

Query: 190 NVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 339
           +V                                     SDDDMGFSLFD
Sbjct: 61  SV-GSGGGAAPVAAAAPAGGAAAAAAPAAEEKKEEVKEESDDDMGFSLFD 109


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