BLASTX nr result

ID: Atractylodes22_contig00006678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00006678
         (1303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273052.1| PREDICTED: zinc finger CCCH domain-containin...   377   e-102
ref|XP_002285629.1| PREDICTED: zinc finger CCCH domain-containin...   357   3e-96
ref|XP_003536809.1| PREDICTED: zinc finger CCCH domain-containin...   342   1e-91
ref|NP_001240135.1| uncharacterized protein LOC100818781 [Glycin...   338   1e-90
ref|XP_002299153.1| predicted protein [Populus trichocarpa] gi|2...   332   1e-88

>ref|XP_002273052.1| PREDICTED: zinc finger CCCH domain-containing protein 14 [Vitis
            vinifera] gi|147768909|emb|CAN75883.1| hypothetical
            protein VITISV_024456 [Vitis vinifera]
          Length = 296

 Score =  377 bits (968), Expect = e-102
 Identities = 197/312 (63%), Positives = 224/312 (71%), Gaps = 5/312 (1%)
 Frame = +3

Query: 177  MEFGGRKRGRQDGG--WNGAPKRPRDEMESFTPGVGSKSKPCTKFFSTSGCPFGEGCHFL 350
            ME GG++RGR DG    NG  K+ + E ESF+ G+GSKSKPCTKFFSTSGCPFGEGCHFL
Sbjct: 1    MEVGGKRRGRPDGAAFGNGGFKKSKQETESFSTGIGSKSKPCTKFFSTSGCPFGEGCHFL 60

Query: 351  HYVPGGYSAVKQFTNVGGGPLG---RKAPMQQQPFADGPATPVKSKLCNKINTPEGCKFG 521
            HYVPGGYSAV Q TN+GG P      + PM      DGP T VK+++CNK NTPEGCKFG
Sbjct: 61   HYVPGGYSAVTQMTNLGGNPAMPPIARNPMAPPTIPDGPPT-VKTRICNKFNTPEGCKFG 119

Query: 522  DKCRFAHSEVELGSKSSFPSYEDSRAQPGPTNYGGGYQGWMEPAPPGLAAAANFGQSATA 701
            DKC FAH E+ELG +   P++ED RA  GP   GG   G +E  PPGLAAAA+FG SATA
Sbjct: 120  DKCHFAHGELELG-RPIVPTHEDPRAM-GPM--GGRLAGRLEAPPPGLAAAASFGASATA 175

Query: 702  KISIDASLAGPIIGKGGVNSKQICRLTGVKLAIRDHDTDQNQRNIELEGTFDQIKQASAM 881
            KIS+DASLAG IIGKGGVNSKQICRLTGVKL+I++H++D NQRNIELEGTFDQIKQASAM
Sbjct: 176  KISVDASLAGAIIGKGGVNSKQICRLTGVKLSIKEHESDPNQRNIELEGTFDQIKQASAM 235

Query: 882  VHELIVNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANKIKTKMCENFAKGQCTFGER 1061
            V ELI N+                              AN  KTKMC+NFAKG CTFG+R
Sbjct: 236  VRELIFNI--------------GSAAGHAKNPTGSAASANNFKTKMCDNFAKGSCTFGDR 281

Query: 1062 CHFAHGPNELRR 1097
            CHFAHG NELR+
Sbjct: 282  CHFAHGANELRK 293


>ref|XP_002285629.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like [Vitis
            vinifera]
          Length = 301

 Score =  357 bits (917), Expect = 3e-96
 Identities = 193/314 (61%), Positives = 216/314 (68%), Gaps = 7/314 (2%)
 Frame = +3

Query: 177  MEFGG-RKRGRQDG--GWNGAPKRPRDEMESFTPGVGSKSKPCTKFFSTSGCPFGEGCHF 347
            ME GG RKRGRQ+G    NG  K+ + EMESF+ G+GSKSKPCTKFFSTSGCPFGEGCHF
Sbjct: 1    MELGGARKRGRQEGTLNGNGGFKKSKQEMESFSSGIGSKSKPCTKFFSTSGCPFGEGCHF 60

Query: 348  LHYVPGGYSAVKQFTNVGGG-PLGRKA--PMQQQPFADGPATP-VKSKLCNKINTPEGCK 515
            LHYVPGG  AV Q  N+GG  PL   A  P     F DG + P VK++LCNK N+ EGCK
Sbjct: 61   LHYVPGGIKAVSQMVNLGGNTPLAPPARNPAVPPSFPDGSSPPAVKTRLCNKYNSAEGCK 120

Query: 516  FGDKCRFAHSEVELGSKSSFPSYEDSRAQPGPTNYGGGYQGWMEPAPPGLAAAANFGQSA 695
            FGDKC FAH E ELG K + PS+ +     G     G   G +EP PPGLAAAA+FG SA
Sbjct: 121  FGDKCHFAHGEWELG-KPTLPSHHEDHRGMG----SGRLAGRLEPPPPGLAAAASFGASA 175

Query: 696  TAKISIDASLAGPIIGKGGVNSKQICRLTGVKLAIRDHDTDQNQRNIELEGTFDQIKQAS 875
            TAKIS+DASLAG IIGK GVNSKQICRLTG KL+I+DHD+D N RNIELEGTFDQIKQAS
Sbjct: 176  TAKISVDASLAGAIIGKSGVNSKQICRLTGAKLSIKDHDSDPNLRNIELEGTFDQIKQAS 235

Query: 876  AMVHELIVNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANKIKTKMCENFAKGQCTFG 1055
            AMV ELIVN+                              AN  KTK+CENF KG CTFG
Sbjct: 236  AMVRELIVNI------------SSASGPPMRNPAMQASAAANNFKTKLCENFTKGSCTFG 283

Query: 1056 ERCHFAHGPNELRR 1097
            ERCHFAHG +ELR+
Sbjct: 284  ERCHFAHGADELRK 297


>ref|XP_003536809.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
            [Glycine max]
          Length = 297

 Score =  342 bits (878), Expect = 1e-91
 Identities = 183/308 (59%), Positives = 212/308 (68%), Gaps = 6/308 (1%)
 Frame = +3

Query: 192  RKRGRQDGGWN--GAPKRPRDEMESFTPGVGSKSKPCTKFFSTSGCPFGEGCHFLHYVPG 365
            RKRGR +  +N  G  K+ R EM+SF  G+GSKSKPCTKFFSTSGCPFGEGCHFLHYVPG
Sbjct: 3    RKRGRHEAAFNFNGGAKKSRPEMDSFPTGLGSKSKPCTKFFSTSGCPFGEGCHFLHYVPG 62

Query: 366  GYSAVKQFTNVGGGPLGRKAPMQQQP--FADGPATPV-KSKLCNKINTPEGCKFGDKCRF 536
            G+ AV Q  NVG  P+  +      P  F DG + PV K++LCNK NT EGCKFGDKC F
Sbjct: 63   GFKAVSQLINVGSNPVIPQVGRNPVPPSFPDGSSPPVVKTRLCNKFNTAEGCKFGDKCHF 122

Query: 537  AHSEVELGSKSSFPSYEDSRAQPG-PTNYGGGYQGWMEPAPPGLAAAANFGQSATAKISI 713
            AH E ELG  ++ PSYED R     P++  GG    +EP  P   AAA+FG SATAKISI
Sbjct: 123  AHGEWELGRPTA-PSYEDPRVMGQMPSSRVGGR---VEPPHPAHGAAASFGASATAKISI 178

Query: 714  DASLAGPIIGKGGVNSKQICRLTGVKLAIRDHDTDQNQRNIELEGTFDQIKQASAMVHEL 893
            +ASLAG +IGK GVNSKQICR+TG KL+IRDHDTD N RNIELEG+FDQIKQASAMVHE+
Sbjct: 179  NASLAGAVIGKNGVNSKQICRVTGAKLSIRDHDTDPNLRNIELEGSFDQIKQASAMVHEV 238

Query: 894  IVNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANKIKTKMCENFAKGQCTFGERCHFA 1073
            I+N+                              A+  KTK+CENFAKG CTFGERCHFA
Sbjct: 239  ILNV------------SSASGPPMKSFTSQNSAPASNFKTKLCENFAKGSCTFGERCHFA 286

Query: 1074 HGPNELRR 1097
            HG +ELR+
Sbjct: 287  HGNDELRK 294


>ref|NP_001240135.1| uncharacterized protein LOC100818781 [Glycine max]
            gi|255636715|gb|ACU18693.1| unknown [Glycine max]
          Length = 297

 Score =  338 bits (868), Expect = 1e-90
 Identities = 181/308 (58%), Positives = 210/308 (68%), Gaps = 6/308 (1%)
 Frame = +3

Query: 192  RKRGRQDGGWN--GAPKRPRDEMESFTPGVGSKSKPCTKFFSTSGCPFGEGCHFLHYVPG 365
            RKRGR +  +N  G  K+ R E +SF  G+GSKSKPCTKFFSTSGCPFGEGCHFLHYVPG
Sbjct: 3    RKRGRPEAAFNFNGGAKKSRPETDSFPTGLGSKSKPCTKFFSTSGCPFGEGCHFLHYVPG 62

Query: 366  GYSAVKQFTNVGGGPLGRKAPMQQQP--FADGPATPV-KSKLCNKINTPEGCKFGDKCRF 536
            G+ AV Q  NVG  P+  +      P  F DG + PV K++LCNK NT EGCKFGDKC F
Sbjct: 63   GFKAVSQLINVGSNPVTPQVGRNPVPPSFPDGSSPPVVKTRLCNKFNTAEGCKFGDKCHF 122

Query: 537  AHSEVELGSKSSFPSYEDSRAQPG-PTNYGGGYQGWMEPAPPGLAAAANFGQSATAKISI 713
            AH E ELG  ++ PSYED R     P++  GG    +EP  P   AAA+FG SATAKISI
Sbjct: 123  AHGEWELGRPTA-PSYEDPRVLGQMPSSRVGGR---VEPPHPAHGAAASFGASATAKISI 178

Query: 714  DASLAGPIIGKGGVNSKQICRLTGVKLAIRDHDTDQNQRNIELEGTFDQIKQASAMVHEL 893
            +ASLAG +IGK GVNSKQICR+TG KL+IRDHDTD N RNIELEG+FDQIKQASAMVHE+
Sbjct: 179  NASLAGAVIGKNGVNSKQICRVTGAKLSIRDHDTDPNLRNIELEGSFDQIKQASAMVHEV 238

Query: 894  IVNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANKIKTKMCENFAKGQCTFGERCHFA 1073
            I+N+                               +  KTK+CENFAKG CTFGERCHFA
Sbjct: 239  ILNV------------SSASGPPMKSFTSQTSAPTSNFKTKLCENFAKGSCTFGERCHFA 286

Query: 1074 HGPNELRR 1097
            HG +ELR+
Sbjct: 287  HGTDELRK 294


>ref|XP_002299153.1| predicted protein [Populus trichocarpa] gi|222846411|gb|EEE83958.1|
            predicted protein [Populus trichocarpa]
          Length = 304

 Score =  332 bits (851), Expect = 1e-88
 Identities = 182/316 (57%), Positives = 205/316 (64%), Gaps = 9/316 (2%)
 Frame = +3

Query: 177  MEFGG--RKRGRQDGGWNG--APKRPRDEMESFTPGVGSKSKPCTKFFSTSGCPFGEGCH 344
            MEFGG  RKR R D  +NG    K+ R EMESF+ G+GSKSKPCTKFFSTSGCPFGEGCH
Sbjct: 1    MEFGGGHRKRTRNDAAFNGNGGHKKNRQEMESFSTGIGSKSKPCTKFFSTSGCPFGEGCH 60

Query: 345  FLHYVPGGYSAVKQFTNVGGGPL----GRKAPMQQQPFADGPATP-VKSKLCNKINTPEG 509
            FLHYVPGG+ AV Q  NVGG P      R   +    + D  + P VKS+LCNK NT EG
Sbjct: 61   FLHYVPGGFKAVSQMLNVGGSPALPPASRNQGVPTLSYQDRSSPPSVKSRLCNKYNTVEG 120

Query: 510  CKFGDKCRFAHSEVELGSKSSFPSYEDSRAQPGPTNYGGGYQGWMEPAPPGLAAAANFGQ 689
            CKFGDKC FAH E ELG  S+ PSYED RA  GP    G     ME    G  AAA+FG 
Sbjct: 121  CKFGDKCHFAHGEWELGKASAAPSYEDPRAM-GPIP--GRMSRHMEHPHQGHGAAASFGS 177

Query: 690  SATAKISIDASLAGPIIGKGGVNSKQICRLTGVKLAIRDHDTDQNQRNIELEGTFDQIKQ 869
            SAT KISIDASLAG IIGK GVNSK ICR+TG KL+IRDH+ D  +R+IELEG+FDQI Q
Sbjct: 178  SATTKISIDASLAGAIIGKNGVNSKHICRVTGAKLSIRDHEADPKKRSIELEGSFDQISQ 237

Query: 870  ASAMVHELIVNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANKIKTKMCENFAKGQCT 1049
            AS MV +LI N+                              +N  KTK+CENF KG CT
Sbjct: 238  ASDMVRQLISNV------------GQASGPPIKNQAMHSSGGSNNFKTKICENFNKGSCT 285

Query: 1050 FGERCHFAHGPNELRR 1097
            FG+RCHFAHG  ELR+
Sbjct: 286  FGDRCHFAHGAEELRK 301


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