BLASTX nr result

ID: Atractylodes22_contig00006636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00006636
         (1673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270788.1| PREDICTED: pentatricopeptide repeat-containi...   465   e-128
ref|XP_002524769.1| pentatricopeptide repeat-containing protein,...   446   e-123
ref|XP_003520548.1| PREDICTED: pentatricopeptide repeat-containi...   391   e-106
ref|XP_003553441.1| PREDICTED: pentatricopeptide repeat-containi...   389   e-105
ref|XP_004147968.1| PREDICTED: pentatricopeptide repeat-containi...   387   e-105

>ref|XP_002270788.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30780
            [Vitis vinifera] gi|296086664|emb|CBI32299.3| unnamed
            protein product [Vitis vinifera]
          Length = 494

 Score =  465 bits (1196), Expect = e-128
 Identities = 220/383 (57%), Positives = 299/383 (78%)
 Frame = -1

Query: 1151 ILDLYGQFANNWVYAEARAKEELIEQVSVFRDELMKNVKDEYSFEKLLEVEGWNLFKMYS 972
            +  + G F++     + RA+EEL  +VS  RDEL+ +  D     ++LE +G +LF+ YS
Sbjct: 40   LTSMIGLFSDKHSELDLRAREELRGKVSQLRDELVPSGDDSDMVVRVLEEKGESLFRSYS 99

Query: 971  NGAALVELLRLLESSPHLAIKVFNWRRRREDNTRPMSSEEYAKGIKIAGRMKNIDLAVEL 792
            NG+A VELL+ L S P+LA++VFNWRR + D + PM+SEEYAKGI +AGR KN+DLAVEL
Sbjct: 100  NGSAFVELLKQLSSWPYLALQVFNWRRNQTDYSIPMTSEEYAKGISVAGRTKNVDLAVEL 159

Query: 791  FTEASTKQVKNASTYNALMSAYMYNGFTEKCQSVYHNLKKDDTCRPTSATFNLLISLFGH 612
            FTEA+ KQ+K  STYNALM AYM NG  EKCQ+++ +LK++ +C PT  T+N+LIS+FG 
Sbjct: 160  FTEAANKQIKTTSTYNALMGAYMCNGHAEKCQALFRDLKREASCSPTIVTYNILISVFGR 219

Query: 611  RVLTDQMEAMFQEMKDSKISPDLTTYNYMIAGYLTAWMWDSMENTYHMMDTGSVRPNLDT 432
             +L D MEA F+E+K+ ++SP+++TYN +IAGY+TAWMW+ ME+T+  M   +++P+++T
Sbjct: 220  LMLVDHMEATFREIKELELSPNISTYNNIIAGYVTAWMWNRMEDTFRTMKEDNIQPDINT 279

Query: 431  RLLMLRGYAHSGNLEKMEEIYNMVGPYILEQHLPLIRAMICAYCKSSCTHRVKRIEELMR 252
             LLMLRGYAHSGNL+KMEE Y ++  ++ ++ +PLIRAMICAYCKSS T RV++I  LM+
Sbjct: 280  HLLMLRGYAHSGNLQKMEETYELIKGHVNDKEIPLIRAMICAYCKSSITDRVEKIGALMK 339

Query: 251  LIPENEYRPWLNVLLIRVYAQEDLVDQMDRSIDEAFEHNTSVNTVRIMRTIVATYIRSNA 72
            LIPENEYRPWLNV+LIRVYAQED V++M+ SI+EAFEH TSV T+R+MR+I+ATY R NA
Sbjct: 340  LIPENEYRPWLNVMLIRVYAQEDWVEEMENSINEAFEHKTSVKTMRVMRSIIATYFRCNA 399

Query: 71   VDRLAKFITRAGDSGWRMCRPVY 3
            VDRLA F+ RA   GW +CR +Y
Sbjct: 400  VDRLANFVKRAECGGWHICRSLY 422


>ref|XP_002524769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223535953|gb|EEF37612.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 509

 Score =  446 bits (1147), Expect = e-123
 Identities = 228/442 (51%), Positives = 320/442 (72%)
 Frame = -1

Query: 1328 MKRVLRVSEMAAAKSEMLYCHCGFSIPKSLMNPTTIPDTRAIPSRWFSTKESQSLPSKPI 1149
            MKRV ++S++A  ++E+L  +   SI ++L  P  +  T++   +      S+ +   P 
Sbjct: 1    MKRVSKISDLAV-QAELLSLNKFPSITQTL-TPYILTLTKSPIYKLARAHTSEPVSFFP- 57

Query: 1148 LDLYGQFANNWVYAEARAKEELIEQVSVFRDELMKNVKDEYSFEKLLEVEGWNLFKMYSN 969
             ++   F+  +   + +A E+L + VS  RDEL+++ +D   F ++LE +G +LF+M S+
Sbjct: 58   -NIISLFSRRFP-VDNKAIEDLSKTVSHLRDELVQHAEDSDKFFRVLEEQGDSLFRMRSD 115

Query: 968  GAALVELLRLLESSPHLAIKVFNWRRRREDNTRPMSSEEYAKGIKIAGRMKNIDLAVELF 789
             +ALVELLR L S PHLA++VFNWRR++ + + PM+ EEYAKGI IAGR KN+DLA+E+F
Sbjct: 116  RSALVELLRQLVSLPHLAVEVFNWRRKQTEWSTPMTHEEYAKGITIAGRAKNVDLAIEIF 175

Query: 788  TEASTKQVKNASTYNALMSAYMYNGFTEKCQSVYHNLKKDDTCRPTSATFNLLISLFGHR 609
             EA +K+ K    YNALM AYMYNG  +KCQS++ + KK+    P+  T+N+LIS+FG  
Sbjct: 176  AEACSKRRKKTCIYNALMGAYMYNGHYDKCQSLFLDFKKEANIGPSVVTYNILISVFGRS 235

Query: 608  VLTDQMEAMFQEMKDSKISPDLTTYNYMIAGYLTAWMWDSMENTYHMMDTGSVRPNLDTR 429
            +L D MEA F+E+ +  ISP+++TYN +IAGY+TAWMWD ME  + +M  G + P+LDT 
Sbjct: 236  MLVDHMEATFRELMNLNISPNVSTYNNLIAGYVTAWMWDDMEQVFQLMKEGPIYPHLDTY 295

Query: 428  LLMLRGYAHSGNLEKMEEIYNMVGPYILEQHLPLIRAMICAYCKSSCTHRVKRIEELMRL 249
            LLMLRGYAHSGN+EKMEE+Y +V  ++    +PLIR MICAYCKSS T R+K+IEEL+RL
Sbjct: 296  LLMLRGYAHSGNIEKMEEMYKLVQDHVNVNEVPLIRTMICAYCKSSITDRIKKIEELLRL 355

Query: 248  IPENEYRPWLNVLLIRVYAQEDLVDQMDRSIDEAFEHNTSVNTVRIMRTIVATYIRSNAV 69
            IPE EYRPWLNVLLI+VYAQ++L++ M+  IDEAF+H T++ TV IMRTI+A+Y R NAV
Sbjct: 356  IPEEEYRPWLNVLLIKVYAQQNLLEAMENKIDEAFKHETTITTVGIMRTIIASYFRCNAV 415

Query: 68   DRLAKFITRAGDSGWRMCRPVY 3
            DRLA F+ RA  SGWR+CR +Y
Sbjct: 416  DRLADFVKRAECSGWRICRSLY 437


>ref|XP_003520548.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30780-like
            [Glycine max]
          Length = 442

 Score =  391 bits (1004), Expect = e-106
 Identities = 181/362 (50%), Positives = 267/362 (73%)
 Frame = -1

Query: 1088 ELIEQVSVFRDELMKNVKDEYSFEKLLEVEGWNLFKMYSNGAALVELLRLLESSPHLAIK 909
            +LI +V++ ++EL+++  D    + +L+     LF+ + NG+AL++L+  L S+P LA++
Sbjct: 10   DLINKVTILKNELIRDSCDSARVQTILDDSFDTLFRRHPNGSALLKLMNQLNSNPSLALQ 69

Query: 908  VFNWRRRREDNTRPMSSEEYAKGIKIAGRMKNIDLAVELFTEASTKQVKNASTYNALMSA 729
            VF+WRR+R +   PM + EY+KGIK AGR  N+DLAV+LF EA+ K +K   TYNALM A
Sbjct: 70   VFSWRRKRSNAENPMDAYEYSKGIKAAGRSGNVDLAVKLFKEAAVKGIKTTGTYNALMGA 129

Query: 728  YMYNGFTEKCQSVYHNLKKDDTCRPTSATFNLLISLFGHRVLTDQMEAMFQEMKDSKISP 549
            +M+NG  + CQS++ +LK+D TC P+ AT+N+L+S++G  +L D MEA F E++   ++ 
Sbjct: 130  FMFNGLPDNCQSLFCDLKRDLTCDPSIATYNILLSVYGRLMLVDHMEATFSEIQRLNLAM 189

Query: 548  DLTTYNYMIAGYLTAWMWDSMENTYHMMDTGSVRPNLDTRLLMLRGYAHSGNLEKMEEIY 369
            ++ TYN++IAGY+TAWMWD ME  + M+   SV PN+ T LLMLRGYA+SGNLEKMEE+Y
Sbjct: 190  NICTYNHLIAGYITAWMWDDMEKVFQMLKLSSVEPNMKTHLLMLRGYANSGNLEKMEEMY 249

Query: 368  NMVGPYILEQHLPLIRAMICAYCKSSCTHRVKRIEELMRLIPENEYRPWLNVLLIRVYAQ 189
            + +  ++  + + LIR MICAYC+SS   R+K+IE L++ IP+ EYRPWLNVLLI++YA+
Sbjct: 250  SFIRDHVNIKEISLIRCMICAYCRSSHADRLKKIELLLKFIPQKEYRPWLNVLLIKLYAK 309

Query: 188  EDLVDQMDRSIDEAFEHNTSVNTVRIMRTIVATYIRSNAVDRLAKFITRAGDSGWRMCRP 9
            ED + +M+ +I+EAFEH TS+ T  I+R I+ATY R NAV++L  F+ RA  SGW +CR 
Sbjct: 310  EDWLAKMENAINEAFEHGTSITTKGILRRIIATYYRCNAVEKLENFVRRAEISGWSICRS 369

Query: 8    VY 3
            +Y
Sbjct: 370  LY 371


>ref|XP_003553441.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30780-like
            [Glycine max]
          Length = 504

 Score =  389 bits (998), Expect = e-105
 Identities = 206/450 (45%), Positives = 293/450 (65%), Gaps = 8/450 (1%)
 Frame = -1

Query: 1328 MKRVLRVSEMAAAKSEML------YCHCGFSIPKSLMNPTTIPDTRAIPSRWFSTKESQS 1167
            M+RV R S  A  ++++L      Y H GFS PK+             PS   +    ++
Sbjct: 1    MRRVWRFSSDATRRAQLLLLLQSHYFH-GFSNPKTT------------PSLATALSHHRN 47

Query: 1166 LPSKP--ILDLYGQFANNWVYAEARAKEELIEQVSVFRDELMKNVKDEYSFEKLLEVEGW 993
            L S P    DL   F      + + AKE+LI + S+ ++EL++   D      +L+    
Sbjct: 48   LNSVPNACSDLIPLFTAK---SCSSAKEDLINKASILKNELIRESSDSARVLSILDDNSD 104

Query: 992  NLFKMYSNGAALVELLRLLESSPHLAIKVFNWRRRREDNTRPMSSEEYAKGIKIAGRMKN 813
             L + + +G+ L+ L+  L S+P LA++VF+WRR+R +   PM + EY+KGIK AGR  N
Sbjct: 105  TLIQRHPDGSVLLRLMNQLNSNPSLALQVFSWRRKRSNVENPMDAYEYSKGIKAAGRSGN 164

Query: 812  IDLAVELFTEASTKQVKNASTYNALMSAYMYNGFTEKCQSVYHNLKKDDTCRPTSATFNL 633
            +DLAV+LF EA+ K +K  STYNALM A M NG  + CQS++ +LK+D TC P+ AT+N+
Sbjct: 165  VDLAVKLFKEAAVKGIKTTSTYNALMGACMSNGLADNCQSLFCDLKRDPTCDPSIATYNI 224

Query: 632  LISLFGHRVLTDQMEAMFQEMKDSKISPDLTTYNYMIAGYLTAWMWDSMENTYHMMDTGS 453
            L+S+FG  +L D MEA F+E++    + ++ TYN+MIAGY+TAWMWD MEN + M+    
Sbjct: 225  LLSVFGRLMLVDHMEATFREIQKLTFTMNICTYNHMIAGYITAWMWDDMENVFQMLKRSP 284

Query: 452  VRPNLDTRLLMLRGYAHSGNLEKMEEIYNMVGPYILEQHLPLIRAMICAYCKSSCTHRVK 273
            V PN+ T +LMLRGYA+SGNLEKMEEIY+ +   +  + + LIR MICAY +SS   R+K
Sbjct: 285  VEPNMKTYMLMLRGYANSGNLEKMEEIYSFITDRVDIKEISLIRCMICAYSRSSDADRLK 344

Query: 272  RIEELMRLIPENEYRPWLNVLLIRVYAQEDLVDQMDRSIDEAFEHNTSVNTVRIMRTIVA 93
            +IE L++ IP  EYRPWLNVLLI++YA+ED +++M+ +I+EAFEH TS+ T  I+R IVA
Sbjct: 345  KIELLLKFIPGKEYRPWLNVLLIKLYAKEDWLEKMENAINEAFEHGTSITTKGILRCIVA 404

Query: 92   TYIRSNAVDRLAKFITRAGDSGWRMCRPVY 3
            TY R NAV++L  F+ RA  SGW +CR  Y
Sbjct: 405  TYYRYNAVEKLENFVRRAEISGWSICRSAY 434


>ref|XP_004147968.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30780-like
            [Cucumis sativus] gi|449494249|ref|XP_004159492.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At2g30780-like [Cucumis sativus]
          Length = 514

 Score =  387 bits (993), Expect = e-105
 Identities = 190/351 (54%), Positives = 257/351 (73%)
 Frame = -1

Query: 1055 ELMKNVKDEYSFEKLLEVEGWNLFKMYSNGAALVELLRLLESSPHLAIKVFNWRRRREDN 876
            EL+ N +D     K+LE     L   +++G+A VELL+ L S P+LA++VFNWRRR +  
Sbjct: 91   ELILNSEDSNKIVKILEDSKDLLLWKHTDGSAFVELLKQLGSQPNLALEVFNWRRR-QGG 149

Query: 875  TRPMSSEEYAKGIKIAGRMKNIDLAVELFTEASTKQVKNASTYNALMSAYMYNGFTEKCQ 696
            + P++ EEYAKGI +AG+ K+IDLAV LF EAS K+VK  STYNALM  +M+NG  +KC 
Sbjct: 150  SFPLTVEEYAKGIAVAGKSKHIDLAVGLFNEASNKRVKATSTYNALMGVFMFNGLADKCN 209

Query: 695  SVYHNLKKDDTCRPTSATFNLLISLFGHRVLTDQMEAMFQEMKDSKISPDLTTYNYMIAG 516
            SV+ +LK+D  C P   T+N+LIS+FG  +L D MEA  +E+ +  +SP++ TYN +IAG
Sbjct: 210  SVFRDLKRDAGCVPNIVTYNILISVFGRLMLVDHMEATMREIHNLNLSPNVNTYNSLIAG 269

Query: 515  YLTAWMWDSMENTYHMMDTGSVRPNLDTRLLMLRGYAHSGNLEKMEEIYNMVGPYILEQH 336
            Y+TAWMW  ME  +  M   S+ PN +T LLMLRGYAHS NLEKMEE+++ +  ++ + +
Sbjct: 270  YITAWMWKRMEQAFMKMKASSITPNTETFLLMLRGYAHSDNLEKMEEMHHFLKDHVNKNN 329

Query: 335  LPLIRAMICAYCKSSCTHRVKRIEELMRLIPENEYRPWLNVLLIRVYAQEDLVDQMDRSI 156
             PLIRAMI AY +SS T +V +I+ L++LIPE EYRPWLNV LIRVYAQ D +++M+ SI
Sbjct: 330  FPLIRAMIYAYSRSSITDKVHKIDALLKLIPEEEYRPWLNVKLIRVYAQADCLERMENSI 389

Query: 155  DEAFEHNTSVNTVRIMRTIVATYIRSNAVDRLAKFITRAGDSGWRMCRPVY 3
            +EAFEH TSV TV +MR+I+A+Y R NAVD+L  FI+RA  SGWR+CR +Y
Sbjct: 390  NEAFEHGTSVYTVHVMRSIIASYFRCNAVDKLINFISRAESSGWRICRSLY 440


Top