BLASTX nr result

ID: Atractylodes22_contig00006604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00006604
         (1030 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36838.3| unnamed protein product [Vitis vinifera]              139   8e-45
emb|CBI39513.3| unnamed protein product [Vitis vinifera]              139   8e-45
ref|XP_002264738.1| PREDICTED: probable U6 snRNA-associated Sm-l...   137   3e-44
ref|XP_003518961.1| PREDICTED: probable U6 snRNA-associated Sm-l...   137   3e-44
ref|XP_002283804.1| PREDICTED: probable U6 snRNA-associated Sm-l...   137   3e-44

>emb|CBI36838.3| unnamed protein product [Vitis vinifera]
          Length = 196

 Score =  139 bits (350), Expect(2) = 8e-45
 Identities = 62/63 (98%), Positives = 63/63 (100%)
 Frame = +2

Query: 173 KMLPLSLLKTSQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC 352
           KMLPLSLLKT+QGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC
Sbjct: 46  KMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC 105

Query: 353 YIR 361
           YIR
Sbjct: 106 YIR 108



 Score = 68.6 bits (166), Expect(2) = 8e-45
 Identities = 31/32 (96%), Positives = 31/32 (96%)
 Frame = +3

Query: 426 PECYIRGNTIKYLRVPDEVIDKVQEETKNRTD 521
           PECYIRGNTIKYLRVPDEVIDKVQEETKNR D
Sbjct: 103 PECYIRGNTIKYLRVPDEVIDKVQEETKNRAD 134


>emb|CBI39513.3| unnamed protein product [Vitis vinifera]
          Length = 162

 Score =  139 bits (350), Expect(2) = 8e-45
 Identities = 62/63 (98%), Positives = 63/63 (100%)
 Frame = +2

Query: 173 KMLPLSLLKTSQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC 352
           KMLPLSLLKT+QGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC
Sbjct: 13  KMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC 72

Query: 353 YIR 361
           YIR
Sbjct: 73  YIR 75



 Score = 68.6 bits (166), Expect(2) = 8e-45
 Identities = 31/32 (96%), Positives = 31/32 (96%)
 Frame = +3

Query: 426 PECYIRGNTIKYLRVPDEVIDKVQEETKNRTD 521
           PECYIRGNTIKYLRVPDEVIDKVQEETKNR D
Sbjct: 70  PECYIRGNTIKYLRVPDEVIDKVQEETKNRAD 101


>ref|XP_002264738.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           [Vitis vinifera]
          Length = 150

 Score =  137 bits (345), Expect(2) = 3e-44
 Identities = 61/62 (98%), Positives = 62/62 (100%)
 Frame = +2

Query: 176 MLPLSLLKTSQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 355
           MLPLSLLKT+QGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 356 IR 361
           IR
Sbjct: 61  IR 62



 Score = 68.6 bits (166), Expect(2) = 3e-44
 Identities = 31/32 (96%), Positives = 31/32 (96%)
 Frame = +3

Query: 426 PECYIRGNTIKYLRVPDEVIDKVQEETKNRTD 521
           PECYIRGNTIKYLRVPDEVIDKVQEETKNR D
Sbjct: 57  PECYIRGNTIKYLRVPDEVIDKVQEETKNRAD 88


>ref|XP_003518961.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           [Glycine max]
          Length = 149

 Score =  137 bits (345), Expect(2) = 3e-44
 Identities = 61/62 (98%), Positives = 62/62 (100%)
 Frame = +2

Query: 176 MLPLSLLKTSQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 355
           MLPLSLLKT+QGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 356 IR 361
           IR
Sbjct: 61  IR 62



 Score = 68.6 bits (166), Expect(2) = 3e-44
 Identities = 31/32 (96%), Positives = 32/32 (100%)
 Frame = +3

Query: 426 PECYIRGNTIKYLRVPDEVIDKVQEETKNRTD 521
           PECYIRGNTIKYLRVPDEVIDKVQEETK+RTD
Sbjct: 57  PECYIRGNTIKYLRVPDEVIDKVQEETKSRTD 88


>ref|XP_002283804.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           [Vitis vinifera]
          Length = 149

 Score =  137 bits (345), Expect(2) = 3e-44
 Identities = 61/62 (98%), Positives = 62/62 (100%)
 Frame = +2

Query: 176 MLPLSLLKTSQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 355
           MLPLSLLKT+QGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 356 IR 361
           IR
Sbjct: 61  IR 62



 Score = 68.6 bits (166), Expect(2) = 3e-44
 Identities = 31/32 (96%), Positives = 31/32 (96%)
 Frame = +3

Query: 426 PECYIRGNTIKYLRVPDEVIDKVQEETKNRTD 521
           PECYIRGNTIKYLRVPDEVIDKVQEETKNR D
Sbjct: 57  PECYIRGNTIKYLRVPDEVIDKVQEETKNRAD 88


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