BLASTX nr result

ID: Atractylodes22_contig00006504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00006504
         (1834 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258...   345   7e-95
ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glyc...   338   1e-94
ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitoch...   330   4e-92
ref|XP_003603877.1| RNA-binding protein 24-B [Medicago truncatul...   328   3e-87
ref|XP_002307819.1| predicted protein [Populus trichocarpa] gi|2...   318   5e-87

>ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258188 [Vitis vinifera]
          Length = 346

 Score =  345 bits (885), Expect(2) = 7e-95
 Identities = 162/228 (71%), Positives = 184/228 (80%), Gaps = 3/228 (1%)
 Frame = -1

Query: 1384 GDTTFTKVFVGGLAWETQSETMRHYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESA 1205
            GDTT+TKVFVGGLAWETQSETMR YFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESA
Sbjct: 27   GDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESA 86

Query: 1204 AKACVDPAPVIDGRRANCNLASLGRPRPALPFGHITSPIPYAGGVQAARVPSIGSYGYQQ 1025
             +AC+DPAP+IDGRRANCNLASLGRPRP++ +G +    PY G V A R   +G++GYQQ
Sbjct: 87   RRACLDPAPIIDGRRANCNLASLGRPRPSMSYGRLRPVTPYLGSVPATRGSYVGNFGYQQ 146

Query: 1024 PLFYSYRQGLVYPSYPYGTYGPEYVYPQGIYNLHSGQQYLQIY---GAVNTPMYPYNQMG 854
            P+ YSY+QG +YPSY Y  YGPEYVYPQG+YN + GQQYLQIY   G VNT +YPY Q+G
Sbjct: 147  PVSYSYQQGFMYPSYGYAAYGPEYVYPQGVYNPYPGQQYLQIYGVPGTVNTAIYPYGQLG 206

Query: 853  QIGTGGHGYPAFQSYPLPGHQVMQFGGASVHATATSSIQTIQAAYPIG 710
            Q     HGY   Q Y +PGHQ MQFGG+SV+A +TS I TIQA YP G
Sbjct: 207  QTLPSSHGYTTVQGYAMPGHQFMQFGGSSVNAISTSPIPTIQAPYPTG 254



 Score = 30.8 bits (68), Expect(2) = 7e-95
 Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = -2

Query: 642 GVAAPVQGQ-QFVIPSAPSQVMQGGVGSDQSAG 547
           G+AAPV  Q QF++P+   Q +QG  G DQ+ G
Sbjct: 254 GIAAPVPAQPQFIVPAHSPQFIQGS-GPDQTTG 285


>ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glycine max]
          Length = 286

 Score =  338 bits (868), Expect(2) = 1e-94
 Identities = 160/229 (69%), Positives = 186/229 (81%), Gaps = 4/229 (1%)
 Frame = -1

Query: 1384 GDTTFTKVFVGGLAWETQSETMRHYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESA 1205
            GDTT+TKVFVGGLAWETQSETMR YF+QFGEILEAVVITDKNTGRSKGYGFVTFRDPE+A
Sbjct: 27   GDTTYTKVFVGGLAWETQSETMRRYFDQFGEILEAVVITDKNTGRSKGYGFVTFRDPEAA 86

Query: 1204 AKACVDPAPVIDGRRANCNLASLGRPRPALPFGHITSPIPYAGGVQAARVPSIGSYGYQQ 1025
             +AC DP+PVIDGRRANCNLASLGRPRP LP+G I    PY G +Q AR   +G +GYQQ
Sbjct: 87   RRACADPSPVIDGRRANCNLASLGRPRPPLPYGRIRPASPYVGSLQPARGAYVGGFGYQQ 146

Query: 1024 PLFYSYRQGLVYPSYPYGTYGPEYVYPQGIYNLHSGQQYLQIY---GAVN-TPMYPYNQM 857
            P+ YSY+QGLVYP Y Y +YGPEY+YPQ +YN + GQQYLQIY   GAVN T +YPY Q+
Sbjct: 147  PVSYSYQQGLVYPPYGYTSYGPEYIYPQSLYNPYMGQQYLQIYGVPGAVNTTTIYPYGQV 206

Query: 856  GQIGTGGHGYPAFQSYPLPGHQVMQFGGASVHATATSSIQTIQAAYPIG 710
            GQ  T GHGY A Q Y +PGHQ++ +GG++V+A  TS +  IQA+YP G
Sbjct: 207  GQAITSGHGYSAMQGYTVPGHQIVPYGGSNVNAITTSPMPAIQASYPSG 255



 Score = 36.6 bits (83), Expect(2) = 1e-94
 Identities = 19/33 (57%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
 Frame = -2

Query: 642 GVAAPVQGQ-QFVIPSAPSQVMQGGVGSDQSAG 547
           G+AAPV GQ QF++P+   Q MQG  G DQ+AG
Sbjct: 255 GIAAPVPGQPQFIVPAPSPQFMQGS-GPDQTAG 286


>ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Glycine
            max]
          Length = 293

 Score =  330 bits (847), Expect(2) = 4e-92
 Identities = 160/236 (67%), Positives = 184/236 (77%), Gaps = 11/236 (4%)
 Frame = -1

Query: 1384 GDTTFTKVFVGGLAWETQSETMRHYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESA 1205
            GDTT+TKVFVGGLAWETQSETMR YF+QFGEILEAVVITDKNTGRSKGYGFVTFRDPE+A
Sbjct: 27   GDTTYTKVFVGGLAWETQSETMRRYFDQFGEILEAVVITDKNTGRSKGYGFVTFRDPEAA 86

Query: 1204 AKACVDPAPVIDGRRANCNLASLGRPRPALPFG-------HITSPIPYAGGVQAARVPSI 1046
             +AC DP PVIDGRRANCNLASLGRPRP LP+G        I    PY G +Q AR   +
Sbjct: 87   RRACADPTPVIDGRRANCNLASLGRPRPPLPYGIVLCLIRRIRPASPYVGSLQPARGAYV 146

Query: 1045 GSYGY-QQPLFYSYRQGLVYPSYPYGTYGPEYVYPQGIYNLHSGQQYLQIY---GAVNTP 878
            G +GY QQP+ YSY+QGLVYP Y Y TYGPEY+YPQ +YN + GQQYLQIY   GAVNT 
Sbjct: 147  GGFGYQQQPVSYSYQQGLVYPPYGYTTYGPEYIYPQSLYNPYMGQQYLQIYGVPGAVNTT 206

Query: 877  MYPYNQMGQIGTGGHGYPAFQSYPLPGHQVMQFGGASVHATATSSIQTIQAAYPIG 710
            +YPY Q+GQ    GHGY A Q Y +PGHQ++ +GG++V+A  TS +  IQA+YP G
Sbjct: 207  VYPYGQVGQAIPSGHGYSAIQGYTVPGHQIVPYGGSNVNAITTSPMPAIQASYPSG 262



 Score = 36.2 bits (82), Expect(2) = 4e-92
 Identities = 19/33 (57%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
 Frame = -2

Query: 642 GVAAPVQGQ-QFVIPSAPSQVMQGGVGSDQSAG 547
           G+AAPV GQ QF++P+   Q MQG  G DQ+AG
Sbjct: 262 GIAAPVPGQPQFIVPAHSPQFMQGS-GPDQTAG 293


>ref|XP_003603877.1| RNA-binding protein 24-B [Medicago truncatula]
            gi|355492925|gb|AES74128.1| RNA-binding protein 24-B
            [Medicago truncatula]
          Length = 371

 Score =  328 bits (841), Expect = 3e-87
 Identities = 156/228 (68%), Positives = 182/228 (79%), Gaps = 5/228 (2%)
 Frame = -1

Query: 1384 GDTTFTKVFVGGLAWETQSETMRHYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESA 1205
            GDTT+TKVFVGGLAWETQSETMR YFEQFG+ILEAVVITDKNTGRSKGYGFVTFRDPE+A
Sbjct: 24   GDTTYTKVFVGGLAWETQSETMRRYFEQFGDILEAVVITDKNTGRSKGYGFVTFRDPEAA 83

Query: 1204 AKACVDPAPVIDGRRANCNLASLGRPR-PALPFGHITSPIPYAGGVQAARVPSIGSYGYQ 1028
             +AC DP+PVIDGRRANCNLAS GRPR P + +G +    PY G +Q AR   +G YGYQ
Sbjct: 84   RRACADPSPVIDGRRANCNLASHGRPRGPPISYGRVRPASPYVGSLQPARGAYVGGYGYQ 143

Query: 1027 QPLFYSYRQGLVYPSYPYGTYGPEYVYPQGIYNLHSG-QQYLQIY---GAVNTPMYPYNQ 860
            QPL Y Y+QG+VYP Y Y TYGPEYVYPQG+YN ++G QQYLQIY   GA+NT +YPY Q
Sbjct: 144  QPLSYGYQQGMVYPPYGYTTYGPEYVYPQGMYNPYAGQQQYLQIYGVPGAMNTTIYPYGQ 203

Query: 859  MGQIGTGGHGYPAFQSYPLPGHQVMQFGGASVHATATSSIQTIQAAYP 716
            +GQ   GGHGY A Q Y +PGHQ++ +GG++V+A  TS +  IQ  YP
Sbjct: 204  LGQAIPGGHGYTAMQGYTVPGHQIVPYGGSNVNAITTSPVPAIQVPYP 251


>ref|XP_002307819.1| predicted protein [Populus trichocarpa] gi|222857268|gb|EEE94815.1|
            predicted protein [Populus trichocarpa]
          Length = 286

 Score =  318 bits (815), Expect(2) = 5e-87
 Identities = 153/229 (66%), Positives = 176/229 (76%), Gaps = 4/229 (1%)
 Frame = -1

Query: 1384 GDTTFTKVFVGGLAWETQSETMRHYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESA 1205
            GDTT+TKVFVGGLAWETQSETMR YFEQFG+ILEAVVITDKNTGRSKGYGFVTFR+P++A
Sbjct: 27   GDTTYTKVFVGGLAWETQSETMRRYFEQFGDILEAVVITDKNTGRSKGYGFVTFREPDAA 86

Query: 1204 AKACVDPAPVIDGRRANCNLASLGRPRPALPFGHITSPIPYAGGVQAARVPSIGSYGYQQ 1025
             +AC DP P+IDGRRANCNLASLGRPRP LP+G      PY   VQ  R   +GS+GYQQ
Sbjct: 87   RRACADPTPIIDGRRANCNLASLGRPRPPLPYGRPRPAAPYITSVQTPRGTYVGSFGYQQ 146

Query: 1024 PLFYSYRQGLVYPSYPYGTYGPEYVYPQGIYNLH-SGQQYLQIY---GAVNTPMYPYNQM 857
            P+ Y Y+QGL+Y  Y Y  YGPEYVY QG YN + +G QYLQIY   G VN+ MYPY Q+
Sbjct: 147  PVSYGYQQGLMYNPYGYAAYGPEYVYQQGAYNPYATGHQYLQIYGVPGTVNSGMYPYGQL 206

Query: 856  GQIGTGGHGYPAFQSYPLPGHQVMQFGGASVHATATSSIQTIQAAYPIG 710
             Q   GGHGY +   Y +PGHQ++QFGG SV+A  TSS+ TIQA Y  G
Sbjct: 207  SQNVPGGHGYTSMPGYAVPGHQIVQFGGPSVNAITTSSMPTIQAPYHTG 255



 Score = 31.6 bits (70), Expect(2) = 5e-87
 Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = -2

Query: 642 GVAAPVQGQ-QFVIPSAPSQVMQGGVGSDQSAG 547
           G+AA V  Q QF++P+   Q MQG  GSDQ+ G
Sbjct: 255 GIAAAVPAQSQFIVPAPSPQYMQGS-GSDQTTG 286


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