BLASTX nr result

ID: Atractylodes22_contig00006457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00006457
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002871926.1| ribosomal protein L36 family protein [Arabid...   116   2e-24
emb|CAN71764.1| hypothetical protein VITISV_039227 [Vitis vinifera]   115   4e-24
ref|XP_002285234.1| PREDICTED: uncharacterized protein LOC100250...   115   5e-24
ref|NP_197518.1| Ribosomal protein L36 [Arabidopsis thaliana] gi...   112   4e-23
ref|XP_004150587.1| PREDICTED: uncharacterized protein LOC101223...   110   1e-22

>ref|XP_002871926.1| ribosomal protein L36 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297317763|gb|EFH48185.1| ribosomal protein
           L36 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 103

 Score =  116 bits (291), Expect = 2e-24
 Identities = 60/105 (57%), Positives = 73/105 (69%), Gaps = 4/105 (3%)
 Frame = +3

Query: 6   MKVRSSVKKMCEFCRTVKRRGRVFVLCSANPKHKQRQGLSTIAYE----EGSLTSRISEM 173
           MKVRSSVKKMCEFC+TVKRRGRV+++CS+NPKHKQRQG S+ AYE       L+  I+  
Sbjct: 1   MKVRSSVKKMCEFCKTVKRRGRVYIICSSNPKHKQRQGFSSFAYEGIIPSPLLSESIASQ 60

Query: 174 QMTRSSYQAKDAPNYGIGGGLASLLVERKVPALFAGWRVSLASLL 308
           +MTR        P  G+  GLASLL +R +P  F GWR  LAS+L
Sbjct: 61  EMTR-------LPGQGVSAGLASLLHKRPMPTAFFGWRSGLASIL 98


>emb|CAN71764.1| hypothetical protein VITISV_039227 [Vitis vinifera]
          Length = 100

 Score =  115 bits (288), Expect = 4e-24
 Identities = 60/101 (59%), Positives = 77/101 (76%)
 Frame = +3

Query: 6   MKVRSSVKKMCEFCRTVKRRGRVFVLCSANPKHKQRQGLSTIAYEEGSLTSRISEMQMTR 185
           MKVRSSVKKMCE+CRTVKRRGRV+VLC+ANPKHKQRQG+ST A+ EG L    SEM    
Sbjct: 1   MKVRSSVKKMCEYCRTVKRRGRVYVLCTANPKHKQRQGMSTFAH-EGPLPPMSSEM---- 55

Query: 186 SSYQAKDAPNYGIGGGLASLLVERKVPALFAGWRVSLASLL 308
            + + + + N+ + GGLAS++ ++  P++  GWR SLASLL
Sbjct: 56  -NAKQEISXNHRLQGGLASIIPKKPEPSMMYGWRASLASLL 95


>ref|XP_002285234.1| PREDICTED: uncharacterized protein LOC100250810 isoform 2 [Vitis
           vinifera] gi|297738962|emb|CBI28207.3| unnamed protein
           product [Vitis vinifera]
          Length = 100

 Score =  115 bits (287), Expect = 5e-24
 Identities = 60/101 (59%), Positives = 77/101 (76%)
 Frame = +3

Query: 6   MKVRSSVKKMCEFCRTVKRRGRVFVLCSANPKHKQRQGLSTIAYEEGSLTSRISEMQMTR 185
           MKVRSSVKKMCE+CRTVKRRGRV+VLC+ANPKHKQRQG+ST A+ EG L    SEM    
Sbjct: 1   MKVRSSVKKMCEYCRTVKRRGRVYVLCTANPKHKQRQGMSTFAH-EGPLPPMSSEM---- 55

Query: 186 SSYQAKDAPNYGIGGGLASLLVERKVPALFAGWRVSLASLL 308
            + + + + N+ + GGLAS++ ++  P++  GWR SLASLL
Sbjct: 56  -NAKQEISRNHRLQGGLASIIPKKPEPSMMYGWRASLASLL 95


>ref|NP_197518.1| Ribosomal protein L36 [Arabidopsis thaliana]
           gi|30687686|ref|NP_850857.1| Ribosomal protein L36
           [Arabidopsis thaliana] gi|17065488|gb|AAL32898.1|
           Unknown protein [Arabidopsis thaliana]
           gi|20148663|gb|AAM10222.1| unknown protein [Arabidopsis
           thaliana] gi|21555484|gb|AAM63869.1| ribosomal protein
           L36-like [Arabidopsis thaliana]
           gi|222424094|dbj|BAH20007.1| AT5G20180 [Arabidopsis
           thaliana] gi|332005426|gb|AED92809.1| Ribosomal protein
           L36 [Arabidopsis thaliana] gi|332005427|gb|AED92810.1|
           Ribosomal protein L36 [Arabidopsis thaliana]
          Length = 103

 Score =  112 bits (279), Expect = 4e-23
 Identities = 57/101 (56%), Positives = 72/101 (71%)
 Frame = +3

Query: 6   MKVRSSVKKMCEFCRTVKRRGRVFVLCSANPKHKQRQGLSTIAYEEGSLTSRISEMQMTR 185
           MKVRSSVKKMCEFC+TVKRRGRV+V+CS+NPKHKQRQG S+ AYE  + +   +E     
Sbjct: 1   MKVRSSVKKMCEFCKTVKRRGRVYVICSSNPKHKQRQGFSSFAYEGITPSPLFAE---PI 57

Query: 186 SSYQAKDAPNYGIGGGLASLLVERKVPALFAGWRVSLASLL 308
           +S +    P  G+  GLASLL +R +P  + GWR  LAS+L
Sbjct: 58  ASQELVRLPGQGVSAGLASLLHKRPMPTAYFGWRSGLASIL 98


>ref|XP_004150587.1| PREDICTED: uncharacterized protein LOC101223220 isoform 2 [Cucumis
           sativus] gi|449465745|ref|XP_004150588.1| PREDICTED:
           uncharacterized protein LOC101223220 isoform 3 [Cucumis
           sativus] gi|449465747|ref|XP_004150589.1| PREDICTED:
           uncharacterized protein LOC101223220 isoform 4 [Cucumis
           sativus] gi|449523620|ref|XP_004168821.1| PREDICTED:
           uncharacterized LOC101223220 isoform 2 [Cucumis sativus]
           gi|449523622|ref|XP_004168822.1| PREDICTED:
           uncharacterized LOC101223220 isoform 3 [Cucumis sativus]
           gi|449523624|ref|XP_004168823.1| PREDICTED:
           uncharacterized LOC101223220 isoform 4 [Cucumis sativus]
          Length = 100

 Score =  110 bits (275), Expect = 1e-22
 Identities = 57/101 (56%), Positives = 72/101 (71%)
 Frame = +3

Query: 6   MKVRSSVKKMCEFCRTVKRRGRVFVLCSANPKHKQRQGLSTIAYEEGSLTSRISEMQMTR 185
           MKVRSSVKKMCEFCRTVKR+GRV++ CS+NPKHKQRQGLST A  EG   S  S     R
Sbjct: 1   MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFA-SEGPSPSLFS-----R 54

Query: 186 SSYQAKDAPNYGIGGGLASLLVERKVPALFAGWRVSLASLL 308
           +  + +  P+  +  GLASL+ ++  P +F GWR+ LAS+L
Sbjct: 55  TEVKQEILPSQSLRTGLASLIPQKNEPTMFLGWRMGLASIL 95


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