BLASTX nr result

ID: Atractylodes22_contig00006408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00006408
         (872 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264340.1| PREDICTED: 30S ribosomal protein S6 alpha, c...   267   2e-69
gb|AAF19690.1|AC009519_24 F1N19.8 [Arabidopsis thaliana]              265   8e-69
ref|NP_176632.1| 30S ribosomal protein S6 alpha [Arabidopsis tha...   265   8e-69
ref|XP_002886339.1| ribosomal protein S6 family protein [Arabido...   265   1e-68
ref|NP_001236420.1| uncharacterized protein LOC100500072 [Glycin...   260   3e-67

>ref|XP_002264340.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic [Vitis
           vinifera]
          Length = 199

 Score =  267 bits (683), Expect = 2e-69
 Identities = 128/155 (82%), Positives = 142/155 (91%)
 Frame = -3

Query: 711 GFSIKAQTLDFSGTFFEGGLGGEDDPNNSSGSVATAIDEKEEPQCPPGLRQYETMAVLRP 532
           G SI+A TLDFSG+FFEGG G +DDPN+  G    A+++K+EPQCPPGLRQYETMAVLRP
Sbjct: 45  GLSIRALTLDFSGSFFEGGFGSDDDPNSPPGPGIAAVEDKDEPQCPPGLRQYETMAVLRP 104

Query: 531 DMSEDERLSLTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLDGIYLLF 352
           DMSEDERL+LTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGE+NTYLDGIYLLF
Sbjct: 105 DMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGESNTYLDGIYLLF 164

Query: 351 TYFTKPESLEVLETTMTMDDDTIRSSTFQIRKRKY 247
           TYFTKPES+EVLE T+T DDD IRSS+F+IRKRKY
Sbjct: 165 TYFTKPESMEVLEATLTADDDVIRSSSFKIRKRKY 199


>gb|AAF19690.1|AC009519_24 F1N19.8 [Arabidopsis thaliana]
          Length = 231

 Score =  265 bits (678), Expect = 8e-69
 Identities = 133/172 (77%), Positives = 149/172 (86%), Gaps = 1/172 (0%)
 Frame = -3

Query: 759 KNKPTPFHFQHQIGRQGFSIKAQTLDFSGTFFEGGLGGEDDPNNSSGS-VATAIDEKEEP 583
           K+KP     Q + G Q F +K+Q LDFSGTFFEGG G +DDP + SGS V+TA+++K EP
Sbjct: 60  KSKPMCASIQKRDGSQ-FVVKSQALDFSGTFFEGGFGSDDDPTSPSGSGVSTALEDKPEP 118

Query: 582 QCPPGLRQYETMAVLRPDMSEDERLSLTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKK 403
           QCPPGLRQYETMAVLRPDMSEDERL LTQKYEELLVAGGGMYVEVFNRGVIPLAYSI+KK
Sbjct: 119 QCPPGLRQYETMAVLRPDMSEDERLGLTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKK 178

Query: 402 NKAGETNTYLDGIYLLFTYFTKPESLEVLETTMTMDDDTIRSSTFQIRKRKY 247
           NKAGETNTYLDGIYLLFTYFTKPES+  LET +T DDD IRSS+F+I+KRKY
Sbjct: 179 NKAGETNTYLDGIYLLFTYFTKPESIVPLETVLTADDDIIRSSSFKIKKRKY 230


>ref|NP_176632.1| 30S ribosomal protein S6 alpha [Arabidopsis thaliana]
           gi|75161441|sp|Q8VY91.1|RR6_ARATH RecName: Full=30S
           ribosomal protein S6 alpha, chloroplastic; Flags:
           Precursor gi|18252237|gb|AAL61951.1| plastid ribosomal
           protein S6, putative [Arabidopsis thaliana]
           gi|21386993|gb|AAM47900.1| plastid ribosomal protein S6,
           putative [Arabidopsis thaliana]
           gi|21553658|gb|AAM62751.1| plastid ribosomal protein S6,
           putative [Arabidopsis thaliana]
           gi|332196127|gb|AEE34248.1| 30S ribosomal protein S6
           alpha [Arabidopsis thaliana]
          Length = 207

 Score =  265 bits (678), Expect = 8e-69
 Identities = 133/172 (77%), Positives = 149/172 (86%), Gaps = 1/172 (0%)
 Frame = -3

Query: 759 KNKPTPFHFQHQIGRQGFSIKAQTLDFSGTFFEGGLGGEDDPNNSSGS-VATAIDEKEEP 583
           K+KP     Q + G Q F +K+Q LDFSGTFFEGG G +DDP + SGS V+TA+++K EP
Sbjct: 36  KSKPMCASIQKRDGSQ-FVVKSQALDFSGTFFEGGFGSDDDPTSPSGSGVSTALEDKPEP 94

Query: 582 QCPPGLRQYETMAVLRPDMSEDERLSLTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKK 403
           QCPPGLRQYETMAVLRPDMSEDERL LTQKYEELLVAGGGMYVEVFNRGVIPLAYSI+KK
Sbjct: 95  QCPPGLRQYETMAVLRPDMSEDERLGLTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKK 154

Query: 402 NKAGETNTYLDGIYLLFTYFTKPESLEVLETTMTMDDDTIRSSTFQIRKRKY 247
           NKAGETNTYLDGIYLLFTYFTKPES+  LET +T DDD IRSS+F+I+KRKY
Sbjct: 155 NKAGETNTYLDGIYLLFTYFTKPESIVPLETVLTADDDIIRSSSFKIKKRKY 206


>ref|XP_002886339.1| ribosomal protein S6 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297332180|gb|EFH62598.1| ribosomal protein S6
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 211

 Score =  265 bits (677), Expect = 1e-68
 Identities = 133/174 (76%), Positives = 148/174 (85%), Gaps = 3/174 (1%)
 Frame = -3

Query: 759 KNKPTPFHFQHQIGRQG--FSIKAQTLDFSGTFFEGGLGGEDDPNNSSGS-VATAIDEKE 589
           K+KP     Q Q  R G  F +K+Q LDFSGTFFEGG G +DDP +  GS V+TA+++K 
Sbjct: 37  KSKPICASLQQQQKRDGSQFVVKSQALDFSGTFFEGGFGSDDDPTSPPGSGVSTALEDKP 96

Query: 588 EPQCPPGLRQYETMAVLRPDMSEDERLSLTQKYEELLVAGGGMYVEVFNRGVIPLAYSIK 409
           EPQCPPGLRQYETMAVLRPDMSEDERL LTQKYEELLVAGGGMYVEVFNRGVIPLAYSI+
Sbjct: 97  EPQCPPGLRQYETMAVLRPDMSEDERLGLTQKYEELLVAGGGMYVEVFNRGVIPLAYSIR 156

Query: 408 KKNKAGETNTYLDGIYLLFTYFTKPESLEVLETTMTMDDDTIRSSTFQIRKRKY 247
           KKNKAGETNTYLDGIYLLFTYFTKPES+  LET +T DDD IRSS+F+I+KRKY
Sbjct: 157 KKNKAGETNTYLDGIYLLFTYFTKPESITPLETVLTADDDIIRSSSFKIKKRKY 210


>ref|NP_001236420.1| uncharacterized protein LOC100500072 [Glycine max]
           gi|255628961|gb|ACU14825.1| unknown [Glycine max]
          Length = 214

 Score =  260 bits (664), Expect = 3e-67
 Identities = 128/165 (77%), Positives = 141/165 (85%)
 Frame = -3

Query: 741 FHFQHQIGRQGFSIKAQTLDFSGTFFEGGLGGEDDPNNSSGSVATAIDEKEEPQCPPGLR 562
           FHF  +    GFSI+AQTLDFS +FFEGG G ED P++  G   TA++EKEEPQCPPGLR
Sbjct: 50  FHFHPKRNDYGFSIRAQTLDFSDSFFEGGFGSEDVPSSPGGPGFTAVEEKEEPQCPPGLR 109

Query: 561 QYETMAVLRPDMSEDERLSLTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETN 382
           QYETM VLRPDMSEDERL+LTQKYEE+LVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETN
Sbjct: 110 QYETMMVLRPDMSEDERLALTQKYEEVLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETN 169

Query: 381 TYLDGIYLLFTYFTKPESLEVLETTMTMDDDTIRSSTFQIRKRKY 247
           TYLDGIYLLFTYFTKPES+  LE TM  DD+ IRS + +IRKRKY
Sbjct: 170 TYLDGIYLLFTYFTKPESITPLEETMLTDDNVIRSMSSKIRKRKY 214


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