BLASTX nr result

ID: Atractylodes22_contig00006368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00006368
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531570.1| PREDICTED: uncharacterized protein LOC100306...    71   1e-10
gb|ACU14190.1| unknown [Glycine max]                                   70   2e-10
gb|AFX67026.1| hypothetical protein [Solanum tuberosum]                68   1e-09
ref|XP_002321794.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_003593113.1| hypothetical protein MTR_2g007950 [Medicago ...    67   3e-09

>ref|XP_003531570.1| PREDICTED: uncharacterized protein LOC100306150 [Glycine max]
          Length = 66

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 30/56 (53%), Positives = 37/56 (66%)
 Frame = +3

Query: 141 VALVMLLIVSSNELTRVESQGVDCFDSCSTGCVNSDTRLMQRCERKCQIRCSPDQS 308
           VA +ML ++ S ++  VE    DC D CST CV SD+RL  RCERKC IRC PD +
Sbjct: 5   VAAMMLFLLISTQMKSVEPDAADCLDGCSTACVQSDSRLQARCERKCSIRCGPDST 60


>gb|ACU14190.1| unknown [Glycine max]
          Length = 66

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 30/56 (53%), Positives = 37/56 (66%)
 Frame = +3

Query: 141 VALVMLLIVSSNELTRVESQGVDCFDSCSTGCVNSDTRLMQRCERKCQIRCSPDQS 308
           VA +ML ++ S ++  VE    DC D CST CV SD+RL  RCERKC IRC PD +
Sbjct: 5   VAAMMLFLLISTQMKSVEPDAADCSDGCSTACVQSDSRLQARCERKCSIRCGPDST 60


>gb|AFX67026.1| hypothetical protein [Solanum tuberosum]
          Length = 74

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 29/73 (39%), Positives = 52/73 (71%), Gaps = 3/73 (4%)
 Frame = +3

Query: 114 MEKKTM--IAAVALVMLLIVSSN-ELTRVESQGVDCFDSCSTGCVNSDTRLMQRCERKCQ 284
           MEKK M  +AA+A+V+++++S+N ++  V +QGV+C+D+C+TGC    ++   +C++KC 
Sbjct: 1   MEKKKMNAVAAMAMVLMILLSANMDIAGVAAQGVNCYDNCNTGCAGLPSKEYLKCDKKCH 60

Query: 285 IRCSPDQSADGHL 323
            RC  D   DG++
Sbjct: 61  KRCGDDDKIDGNV 73


>ref|XP_002321794.1| predicted protein [Populus trichocarpa] gi|222868790|gb|EEF05921.1|
           predicted protein [Populus trichocarpa]
          Length = 67

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
 Frame = +3

Query: 147 LVMLLIVS--SNELTRVESQGVDCFDSCSTGCVNSDTRLMQRCERKCQIRCSPDQSADGH 320
           LV +LIVS  ++    V S   DC D+C+TGCV S+TRLM+RCE KC IRC PD   + H
Sbjct: 6   LVAVLIVSMVASHFENVASDASDCNDACTTGCVQSNTRLMRRCEIKCGIRCGPDSEVEDH 65


>ref|XP_003593113.1| hypothetical protein MTR_2g007950 [Medicago truncatula]
           gi|355482161|gb|AES63364.1| hypothetical protein
           MTR_2g007950 [Medicago truncatula]
           gi|388504710|gb|AFK40421.1| unknown [Medicago
           truncatula]
          Length = 73

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 31/71 (43%), Positives = 39/71 (54%)
 Frame = +3

Query: 114 MEKKTMIAAVALVMLLIVSSNELTRVESQGVDCFDSCSTGCVNSDTRLMQRCERKCQIRC 293
           M K  M   V  +M+L V  +++  V     DC D C TGCV  D+RL  RCERKC IRC
Sbjct: 3   MMKMKMKKTVFAMMVLFVIFSQMDSVVPDAFDCLDGCQTGCVQRDSRLTARCERKCSIRC 62

Query: 294 SPDQSADGHLD 326
            PD   +  +D
Sbjct: 63  GPDSMFEKGMD 73


Top