BLASTX nr result
ID: Atractylodes22_contig00006304
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00006304
(1241 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing fact... 390 e-138
ref|XP_003632762.1| PREDICTED: pre-mRNA-processing-splicing fact... 390 e-138
emb|CAN66492.1| hypothetical protein VITISV_019851 [Vitis vinifera] 390 e-138
ref|XP_003597914.1| Pre-mRNA-processing-splicing factor [Medicag... 390 e-138
ref|XP_002517654.1| Pre-mRNA-processing-splicing factor, putativ... 390 e-138
>ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like isoform 1
[Vitis vinifera]
Length = 2367
Score = 390 bits (1002), Expect(3) = e-138
Identities = 189/198 (95%), Positives = 191/198 (96%), Gaps = 3/198 (1%)
Frame = -2
Query: 730 FWE---GFEESMKYKKLTNAQRSGLKQIPNHRFTPWWSPTINRANVYVGFKVQLDLTGIF 560
FWE GFEESMKYKKLTNAQRSGL QIPN RFT WWSPTINRANVYVGF+VQLDLTGIF
Sbjct: 1534 FWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIF 1593
Query: 559 MHGKIPTLKISLIQIFRAHLWQKVHESVVMDLCQVLDQELDALEFKTVQKETIHPRKSYK 380
MHGKIPTLKISLIQIFRAHLWQKVHESVVMDLCQVLDQELDALE +TVQKETIHPRKSYK
Sbjct: 1594 MHGKIPTLKISLIQIFRAHLWQKVHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYK 1653
Query: 379 MNSSCADILLFAAHRWPMSKPSLVAESKDVFDQKASNKYWIDVQLRWGDYDSHDIERYTR 200
MNSSCADILLFAAHRWPMSKPSLVAESKDVFDQKASNKYWIDVQLRWGDYDSHDIERYTR
Sbjct: 1654 MNSSCADILLFAAHRWPMSKPSLVAESKDVFDQKASNKYWIDVQLRWGDYDSHDIERYTR 1713
Query: 199 AKFMDYTTDNMSIYPSPT 146
AKFMDYTTDNMSIYPSPT
Sbjct: 1714 AKFMDYTTDNMSIYPSPT 1731
Score = 80.9 bits (198), Expect(3) = e-138
Identities = 38/44 (86%), Positives = 41/44 (93%)
Frame = -3
Query: 147 QSNPTLYVLRERLRKGLQLYSSGPTEPYLSSQNYGEIFSNQITY 16
+SNP LYVLRER+RKGLQLYSS PTEPYLSSQNYGEIFSNQI +
Sbjct: 1767 KSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQIIW 1810
Score = 69.7 bits (169), Expect(3) = e-138
Identities = 34/38 (89%), Positives = 34/38 (89%)
Frame = -1
Query: 842 LNNYRTDVIPALGGVEGILEHTLFKGT*YVFPTWEGLF 729
LNNYRTDVI ALGGVEGILEHTLFKGT FPTWEGLF
Sbjct: 1499 LNNYRTDVIQALGGVEGILEHTLFKGT--YFPTWEGLF 1534
Score = 117 bits (293), Expect(2) = 3e-43
Identities = 56/61 (91%), Positives = 57/61 (93%)
Frame = -1
Query: 1241 VPGLLVPIENMILRFVKSKADWWTNVAHYNRERIRRGATVDKPVWRKNLGRLTHLWLKAE 1062
VPGL VPIENMILR+VKSKADWWTNVAHYNRERIRRGATVDK V RKNLGRLT LWLKAE
Sbjct: 759 VPGLPVPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAE 818
Query: 1061 Q 1059
Q
Sbjct: 819 Q 819
Score = 85.5 bits (210), Expect(2) = 3e-43
Identities = 39/42 (92%), Positives = 39/42 (92%)
Frame = -3
Query: 966 GPYVTPEEAVAIYTTTVHWLESRKFLPIAFPPLSYKHDIKLL 841
GPYVTPEEAVAIYTTTVHWLESRKF PI FPPLSYKHD KLL
Sbjct: 829 GPYVTPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLL 870
>ref|XP_003632762.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like isoform 2
[Vitis vinifera] gi|297743472|emb|CBI36339.3| unnamed
protein product [Vitis vinifera]
Length = 2347
Score = 390 bits (1002), Expect(3) = e-138
Identities = 189/198 (95%), Positives = 191/198 (96%), Gaps = 3/198 (1%)
Frame = -2
Query: 730 FWE---GFEESMKYKKLTNAQRSGLKQIPNHRFTPWWSPTINRANVYVGFKVQLDLTGIF 560
FWE GFEESMKYKKLTNAQRSGL QIPN RFT WWSPTINRANVYVGF+VQLDLTGIF
Sbjct: 1514 FWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIF 1573
Query: 559 MHGKIPTLKISLIQIFRAHLWQKVHESVVMDLCQVLDQELDALEFKTVQKETIHPRKSYK 380
MHGKIPTLKISLIQIFRAHLWQKVHESVVMDLCQVLDQELDALE +TVQKETIHPRKSYK
Sbjct: 1574 MHGKIPTLKISLIQIFRAHLWQKVHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYK 1633
Query: 379 MNSSCADILLFAAHRWPMSKPSLVAESKDVFDQKASNKYWIDVQLRWGDYDSHDIERYTR 200
MNSSCADILLFAAHRWPMSKPSLVAESKDVFDQKASNKYWIDVQLRWGDYDSHDIERYTR
Sbjct: 1634 MNSSCADILLFAAHRWPMSKPSLVAESKDVFDQKASNKYWIDVQLRWGDYDSHDIERYTR 1693
Query: 199 AKFMDYTTDNMSIYPSPT 146
AKFMDYTTDNMSIYPSPT
Sbjct: 1694 AKFMDYTTDNMSIYPSPT 1711
Score = 80.9 bits (198), Expect(3) = e-138
Identities = 38/44 (86%), Positives = 41/44 (93%)
Frame = -3
Query: 147 QSNPTLYVLRERLRKGLQLYSSGPTEPYLSSQNYGEIFSNQITY 16
+SNP LYVLRER+RKGLQLYSS PTEPYLSSQNYGEIFSNQI +
Sbjct: 1747 KSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQIIW 1790
Score = 69.7 bits (169), Expect(3) = e-138
Identities = 34/38 (89%), Positives = 34/38 (89%)
Frame = -1
Query: 842 LNNYRTDVIPALGGVEGILEHTLFKGT*YVFPTWEGLF 729
LNNYRTDVI ALGGVEGILEHTLFKGT FPTWEGLF
Sbjct: 1479 LNNYRTDVIQALGGVEGILEHTLFKGT--YFPTWEGLF 1514
Score = 117 bits (293), Expect(2) = 3e-43
Identities = 56/61 (91%), Positives = 57/61 (93%)
Frame = -1
Query: 1241 VPGLLVPIENMILRFVKSKADWWTNVAHYNRERIRRGATVDKPVWRKNLGRLTHLWLKAE 1062
VPGL VPIENMILR+VKSKADWWTNVAHYNRERIRRGATVDK V RKNLGRLT LWLKAE
Sbjct: 739 VPGLPVPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAE 798
Query: 1061 Q 1059
Q
Sbjct: 799 Q 799
Score = 85.5 bits (210), Expect(2) = 3e-43
Identities = 39/42 (92%), Positives = 39/42 (92%)
Frame = -3
Query: 966 GPYVTPEEAVAIYTTTVHWLESRKFLPIAFPPLSYKHDIKLL 841
GPYVTPEEAVAIYTTTVHWLESRKF PI FPPLSYKHD KLL
Sbjct: 809 GPYVTPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLL 850
>emb|CAN66492.1| hypothetical protein VITISV_019851 [Vitis vinifera]
Length = 2294
Score = 390 bits (1002), Expect(3) = e-138
Identities = 189/198 (95%), Positives = 191/198 (96%), Gaps = 3/198 (1%)
Frame = -2
Query: 730 FWE---GFEESMKYKKLTNAQRSGLKQIPNHRFTPWWSPTINRANVYVGFKVQLDLTGIF 560
FWE GFEESMKYKKLTNAQRSGL QIPN RFT WWSPTINRANVYVGF+VQLDLTGIF
Sbjct: 1485 FWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIF 1544
Query: 559 MHGKIPTLKISLIQIFRAHLWQKVHESVVMDLCQVLDQELDALEFKTVQKETIHPRKSYK 380
MHGKIPTLKISLIQIFRAHLWQKVHESVVMDLCQVLDQELDALE +TVQKETIHPRKSYK
Sbjct: 1545 MHGKIPTLKISLIQIFRAHLWQKVHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYK 1604
Query: 379 MNSSCADILLFAAHRWPMSKPSLVAESKDVFDQKASNKYWIDVQLRWGDYDSHDIERYTR 200
MNSSCADILLFAAHRWPMSKPSLVAESKDVFDQKASNKYWIDVQLRWGDYDSHDIERYTR
Sbjct: 1605 MNSSCADILLFAAHRWPMSKPSLVAESKDVFDQKASNKYWIDVQLRWGDYDSHDIERYTR 1664
Query: 199 AKFMDYTTDNMSIYPSPT 146
AKFMDYTTDNMSIYPSPT
Sbjct: 1665 AKFMDYTTDNMSIYPSPT 1682
Score = 80.9 bits (198), Expect(3) = e-138
Identities = 38/44 (86%), Positives = 41/44 (93%)
Frame = -3
Query: 147 QSNPTLYVLRERLRKGLQLYSSGPTEPYLSSQNYGEIFSNQITY 16
+SNP LYVLRER+RKGLQLYSS PTEPYLSSQNYGEIFSNQI +
Sbjct: 1718 KSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQIIW 1761
Score = 69.7 bits (169), Expect(3) = e-138
Identities = 34/38 (89%), Positives = 34/38 (89%)
Frame = -1
Query: 842 LNNYRTDVIPALGGVEGILEHTLFKGT*YVFPTWEGLF 729
LNNYRTDVI ALGGVEGILEHTLFKGT FPTWEGLF
Sbjct: 1450 LNNYRTDVIQALGGVEGILEHTLFKGT--YFPTWEGLF 1485
Score = 117 bits (293), Expect(2) = 3e-43
Identities = 56/61 (91%), Positives = 57/61 (93%)
Frame = -1
Query: 1241 VPGLLVPIENMILRFVKSKADWWTNVAHYNRERIRRGATVDKPVWRKNLGRLTHLWLKAE 1062
VPGL VPIENMILR+VKSKADWWTNVAHYNRERIRRGATVDK V RKNLGRLT LWLKAE
Sbjct: 739 VPGLPVPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAE 798
Query: 1061 Q 1059
Q
Sbjct: 799 Q 799
Score = 85.5 bits (210), Expect(2) = 3e-43
Identities = 39/42 (92%), Positives = 39/42 (92%)
Frame = -3
Query: 966 GPYVTPEEAVAIYTTTVHWLESRKFLPIAFPPLSYKHDIKLL 841
GPYVTPEEAVAIYTTTVHWLESRKF PI FPPLSYKHD KLL
Sbjct: 809 GPYVTPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLL 850
>ref|XP_003597914.1| Pre-mRNA-processing-splicing factor [Medicago truncatula]
gi|355486962|gb|AES68165.1| Pre-mRNA-processing-splicing
factor [Medicago truncatula]
Length = 2398
Score = 390 bits (1001), Expect(3) = e-138
Identities = 188/198 (94%), Positives = 191/198 (96%), Gaps = 3/198 (1%)
Frame = -2
Query: 730 FWE---GFEESMKYKKLTNAQRSGLKQIPNHRFTPWWSPTINRANVYVGFKVQLDLTGIF 560
FWE GFEESMKYKKLTNAQRSGL QIPN RFT WWSPTINRANVYVGF+VQLDLTGIF
Sbjct: 1524 FWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIF 1583
Query: 559 MHGKIPTLKISLIQIFRAHLWQKVHESVVMDLCQVLDQELDALEFKTVQKETIHPRKSYK 380
MHGKIPTLKISLIQIFRAHLWQK+HESVVMDLCQVLDQELDALE +TVQKETIHPRKSYK
Sbjct: 1584 MHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYK 1643
Query: 379 MNSSCADILLFAAHRWPMSKPSLVAESKDVFDQKASNKYWIDVQLRWGDYDSHDIERYTR 200
MNSSCADILLFAAHRWPMSKPSLVAESKDVFDQKASNKYWIDVQLRWGDYDSHDIERYTR
Sbjct: 1644 MNSSCADILLFAAHRWPMSKPSLVAESKDVFDQKASNKYWIDVQLRWGDYDSHDIERYTR 1703
Query: 199 AKFMDYTTDNMSIYPSPT 146
AKFMDYTTDNMSIYPSPT
Sbjct: 1704 AKFMDYTTDNMSIYPSPT 1721
Score = 80.9 bits (198), Expect(3) = e-138
Identities = 38/44 (86%), Positives = 41/44 (93%)
Frame = -3
Query: 147 QSNPTLYVLRERLRKGLQLYSSGPTEPYLSSQNYGEIFSNQITY 16
+SNP LYVLRER+RKGLQLYSS PTEPYLSSQNYGEIFSNQI +
Sbjct: 1757 KSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQIIW 1800
Score = 69.7 bits (169), Expect(3) = e-138
Identities = 34/38 (89%), Positives = 34/38 (89%)
Frame = -1
Query: 842 LNNYRTDVIPALGGVEGILEHTLFKGT*YVFPTWEGLF 729
LNNYRTDVI ALGGVEGILEHTLFKGT FPTWEGLF
Sbjct: 1489 LNNYRTDVIQALGGVEGILEHTLFKGT--YFPTWEGLF 1524
Score = 117 bits (293), Expect(2) = 3e-43
Identities = 56/61 (91%), Positives = 57/61 (93%)
Frame = -1
Query: 1241 VPGLLVPIENMILRFVKSKADWWTNVAHYNRERIRRGATVDKPVWRKNLGRLTHLWLKAE 1062
VPGL VPIENMILR+VKSKADWWTNVAHYNRERIRRGATVDK V RKNLGRLT LWLKAE
Sbjct: 747 VPGLPVPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAE 806
Query: 1061 Q 1059
Q
Sbjct: 807 Q 807
Score = 85.5 bits (210), Expect(2) = 3e-43
Identities = 39/42 (92%), Positives = 39/42 (92%)
Frame = -3
Query: 966 GPYVTPEEAVAIYTTTVHWLESRKFLPIAFPPLSYKHDIKLL 841
GPYVTPEEAVAIYTTTVHWLESRKF PI FPPLSYKHD KLL
Sbjct: 817 GPYVTPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLL 858
>ref|XP_002517654.1| Pre-mRNA-processing-splicing factor, putative [Ricinus communis]
gi|223543286|gb|EEF44818.1| Pre-mRNA-processing-splicing
factor, putative [Ricinus communis]
Length = 2376
Score = 390 bits (1001), Expect(3) = e-138
Identities = 188/198 (94%), Positives = 191/198 (96%), Gaps = 3/198 (1%)
Frame = -2
Query: 730 FWE---GFEESMKYKKLTNAQRSGLKQIPNHRFTPWWSPTINRANVYVGFKVQLDLTGIF 560
FWE GFEESMKYKKLTNAQRSGL QIPN RFT WWSPTINRANVYVGF+VQLDLTGIF
Sbjct: 1543 FWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIF 1602
Query: 559 MHGKIPTLKISLIQIFRAHLWQKVHESVVMDLCQVLDQELDALEFKTVQKETIHPRKSYK 380
MHGKIPTLKISLIQIFRAHLWQK+HESVVMDLCQVLDQELDALE +TVQKETIHPRKSYK
Sbjct: 1603 MHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYK 1662
Query: 379 MNSSCADILLFAAHRWPMSKPSLVAESKDVFDQKASNKYWIDVQLRWGDYDSHDIERYTR 200
MNSSCADILLFAAHRWPMSKPSLVAESKDVFDQKASNKYWIDVQLRWGDYDSHDIERYTR
Sbjct: 1663 MNSSCADILLFAAHRWPMSKPSLVAESKDVFDQKASNKYWIDVQLRWGDYDSHDIERYTR 1722
Query: 199 AKFMDYTTDNMSIYPSPT 146
AKFMDYTTDNMSIYPSPT
Sbjct: 1723 AKFMDYTTDNMSIYPSPT 1740
Score = 80.9 bits (198), Expect(3) = e-138
Identities = 38/44 (86%), Positives = 41/44 (93%)
Frame = -3
Query: 147 QSNPTLYVLRERLRKGLQLYSSGPTEPYLSSQNYGEIFSNQITY 16
+SNP LYVLRER+RKGLQLYSS PTEPYLSSQNYGEIFSNQI +
Sbjct: 1776 KSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQIIW 1819
Score = 69.7 bits (169), Expect(3) = e-138
Identities = 34/38 (89%), Positives = 34/38 (89%)
Frame = -1
Query: 842 LNNYRTDVIPALGGVEGILEHTLFKGT*YVFPTWEGLF 729
LNNYRTDVI ALGGVEGILEHTLFKGT FPTWEGLF
Sbjct: 1508 LNNYRTDVIQALGGVEGILEHTLFKGT--YFPTWEGLF 1543
Score = 117 bits (293), Expect(2) = 3e-43
Identities = 56/61 (91%), Positives = 57/61 (93%)
Frame = -1
Query: 1241 VPGLLVPIENMILRFVKSKADWWTNVAHYNRERIRRGATVDKPVWRKNLGRLTHLWLKAE 1062
VPGL VPIENMILR+VKSKADWWTNVAHYNRERIRRGATVDK V RKNLGRLT LWLKAE
Sbjct: 768 VPGLPVPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAE 827
Query: 1061 Q 1059
Q
Sbjct: 828 Q 828
Score = 85.5 bits (210), Expect(2) = 3e-43
Identities = 39/42 (92%), Positives = 39/42 (92%)
Frame = -3
Query: 966 GPYVTPEEAVAIYTTTVHWLESRKFLPIAFPPLSYKHDIKLL 841
GPYVTPEEAVAIYTTTVHWLESRKF PI FPPLSYKHD KLL
Sbjct: 838 GPYVTPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLL 879