BLASTX nr result

ID: Atractylodes22_contig00006281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00006281
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143411.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    81   1e-13
ref|XP_002530611.1| dead box ATP-dependent RNA helicase, putativ...    76   2e-12
ref|NP_195217.1| DEAD-box ATP-dependent RNA helicase 16 [Arabido...    74   9e-12
ref|XP_003635571.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    74   1e-11
emb|CBI14828.3| unnamed protein product [Vitis vinifera]               74   1e-11

>ref|XP_004143411.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like [Cucumis
           sativus] gi|449508529|ref|XP_004163338.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 16-like [Cucumis
           sativus]
          Length = 596

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/53 (75%), Positives = 46/53 (86%)
 Frame = -1

Query: 448 EENQDGEEVQELTFEELGLDPRLIRALTKKNIEKPTPIQQTGIPLILEGKDVV 290
           EE ++GEE +EL+FEELGLDPRL+RAL KK I+KPTPIQ   IPLILEGKDVV
Sbjct: 11  EEEKEGEE-EELSFEELGLDPRLVRALIKKEIQKPTPIQHVAIPLILEGKDVV 62



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/37 (70%), Positives = 32/37 (86%)
 Frame = -1

Query: 115 PTAIILVPSRELCQQVYSEVLSLIELCRVQLKVVQLT 5
           P+A++LVP+REL QQVY E+ SLIE CRVQ+KV QLT
Sbjct: 95  PSAVVLVPTRELSQQVYKEISSLIETCRVQVKVAQLT 131


>ref|XP_002530611.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223529859|gb|EEF31791.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 616

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 39/55 (70%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
 Frame = -1

Query: 448 EENQDGEEVQELTFEELGLDPRLIRALTKK--NIEKPTPIQQTGIPLILEGKDVV 290
           +E ++ EE +EL+FEELGLDPRLIRAL KK  +I KPTPIQ+  IPLILEGKDVV
Sbjct: 25  KEEEEEEEEEELSFEELGLDPRLIRALNKKEISIRKPTPIQRVAIPLILEGKDVV 79



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/39 (74%), Positives = 33/39 (84%)
 Frame = -1

Query: 121 LAPTAIILVPSRELCQQVYSEVLSLIELCRVQLKVVQLT 5
           LAP+A ILVPS ELCQQVY EV +LI+ C+VQLK VQLT
Sbjct: 110 LAPSAFILVPSGELCQQVYKEVSALIDWCKVQLKAVQLT 148


>ref|NP_195217.1| DEAD-box ATP-dependent RNA helicase 16 [Arabidopsis thaliana]
           gi|75337761|sp|Q9SW44.1|RH16_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 16
           gi|5123708|emb|CAB45452.1| RNA helicase (RH16)
           [Arabidopsis thaliana] gi|7270442|emb|CAB80208.1| RNA
           helicase (RH16) [Arabidopsis thaliana]
           gi|27754373|gb|AAO22635.1| putative DEAD/DEAH box RNA
           helicase protein [Arabidopsis thaliana]
           gi|28394057|gb|AAO42436.1| putative DEAD/DEAH box RNA
           helicase protein [Arabidopsis thaliana]
           gi|332661036|gb|AEE86436.1| DEAD-box ATP-dependent RNA
           helicase 16 [Arabidopsis thaliana]
          Length = 626

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 38/55 (69%), Positives = 43/55 (78%)
 Frame = -1

Query: 454 RQEENQDGEEVQELTFEELGLDPRLIRALTKKNIEKPTPIQQTGIPLILEGKDVV 290
           R++E +  EE    +FEELGLD RLIRALTKK IEKPT IQQ+ IP ILEGKDVV
Sbjct: 33  REQEEEQKEEEAPKSFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVV 87



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 34/39 (87%), Positives = 36/39 (92%)
 Frame = -1

Query: 121 LAPTAIILVPSRELCQQVYSEVLSLIELCRVQLKVVQLT 5
           LAP+A ILVPSRELCQQVY+EV SLIELCRVQLK VQLT
Sbjct: 119 LAPSAFILVPSRELCQQVYTEVSSLIELCRVQLKAVQLT 157


>ref|XP_003635571.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like, partial
           [Vitis vinifera]
          Length = 301

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/53 (67%), Positives = 41/53 (77%)
 Frame = -1

Query: 448 EENQDGEEVQELTFEELGLDPRLIRALTKKNIEKPTPIQQTGIPLILEGKDVV 290
           E  +  E+ +  TFEELGL+P LIRAL KK IEKPTPIQ+  IPLILEGKDVV
Sbjct: 13  ERREQEEDEESKTFEELGLEPSLIRALIKKGIEKPTPIQEVAIPLILEGKDVV 65



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/39 (87%), Positives = 37/39 (94%)
 Frame = -1

Query: 121 LAPTAIILVPSRELCQQVYSEVLSLIELCRVQLKVVQLT 5
           LAP+A +LVP+RELCQQVYSEVLSLIELCR QLKVVQLT
Sbjct: 96  LAPSAFVLVPTRELCQQVYSEVLSLIELCRGQLKVVQLT 134


>emb|CBI14828.3| unnamed protein product [Vitis vinifera]
          Length = 141

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/53 (67%), Positives = 41/53 (77%)
 Frame = -1

Query: 448 EENQDGEEVQELTFEELGLDPRLIRALTKKNIEKPTPIQQTGIPLILEGKDVV 290
           E  +  E+ +  TFEELGL+P LIRAL KK IEKPTPIQ+  IPLILEGKDVV
Sbjct: 51  ERREQEEDEESKTFEELGLEPSLIRALIKKGIEKPTPIQEVAIPLILEGKDVV 103


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