BLASTX nr result

ID: Atractylodes22_contig00006277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00006277
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea...    68   7e-10
ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-...    67   1e-09
ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-...    67   1e-09
ref|NP_001141474.1| uncharacterized protein LOC100273584 [Zea ma...    65   8e-09
ref|XP_002468278.1| hypothetical protein SORBIDRAFT_01g042890 [S...    64   1e-08

>dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea nil]
          Length = 604

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 36/54 (66%), Positives = 42/54 (77%), Gaps = 6/54 (11%)
 Frame = +1

Query: 46  FQM*LKKATWVPYLF*VFV------NEKRQRITVKDTAPVDFAAESKFLLEEMS 189
           +QM LK+ATWVPYLF V V      NEKRQRITV+  APVDFAAES++ LEEM+
Sbjct: 545 YQMKLKEATWVPYLFRVSVTPQEYNNEKRQRITVRAAAPVDFAAESRYFLEEMA 598


>ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
           partial [Cucumis sativus]
          Length = 560

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/58 (60%), Positives = 44/58 (75%), Gaps = 6/58 (10%)
 Frame = +1

Query: 34  QARGFQM*LKKATWVPYLF*VFV------NEKRQRITVKDTAPVDFAAESKFLLEEMS 189
           +   +Q+ LK+ATWVP+LF V V      NEKRQRITV+  APVDFAAES+FLLEE++
Sbjct: 498 EENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRSVAPVDFAAESRFLLEEIA 555


>ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 603

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/58 (60%), Positives = 44/58 (75%), Gaps = 6/58 (10%)
 Frame = +1

Query: 34  QARGFQM*LKKATWVPYLF*VFV------NEKRQRITVKDTAPVDFAAESKFLLEEMS 189
           +   +Q+ LK+ATWVP+LF V V      NEKRQRITV+  APVDFAAES+FLLEE++
Sbjct: 541 EENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRSVAPVDFAAESRFLLEEIA 598


>ref|NP_001141474.1| uncharacterized protein LOC100273584 [Zea mays]
           gi|194704722|gb|ACF86445.1| unknown [Zea mays]
           gi|195647462|gb|ACG43199.1| replication protein A 70 kDa
           DNA-binding subunit [Zea mays]
           gi|413956552|gb|AFW89201.1| Replication protein A
           DNA-binding subunit [Zea mays]
          Length = 623

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 33/50 (66%), Positives = 41/50 (82%), Gaps = 6/50 (12%)
 Frame = +1

Query: 58  LKKATWVPYLF*V------FVNEKRQRITVKDTAPVDFAAESKFLLEEMS 189
           LK+ATWVP+LF V      ++NEKRQRITV+  APVDFAAESK+LLEE++
Sbjct: 569 LKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIA 618


>ref|XP_002468278.1| hypothetical protein SORBIDRAFT_01g042890 [Sorghum bicolor]
           gi|241922132|gb|EER95276.1| hypothetical protein
           SORBIDRAFT_01g042890 [Sorghum bicolor]
          Length = 623

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/50 (64%), Positives = 41/50 (82%), Gaps = 6/50 (12%)
 Frame = +1

Query: 58  LKKATWVPYLF*V------FVNEKRQRITVKDTAPVDFAAESKFLLEEMS 189
           LK+ATWVP+LF V      ++NEKRQRITV+  APVD+AAESK+LLEE++
Sbjct: 569 LKEATWVPHLFRVSVTQHEYMNEKRQRITVRSEAPVDYAAESKYLLEEIA 618


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