BLASTX nr result

ID: Atractylodes22_contig00006256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00006256
         (1931 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297879.1| predicted protein [Populus trichocarpa] gi|2...   401   e-109
ref|XP_002512828.1| ubiquinol-cytochrome C reductase iron-sulfur...   400   e-109
ref|XP_002304638.1| predicted protein [Populus trichocarpa] gi|2...   400   e-109
ref|XP_002271311.1| PREDICTED: cytochrome b-c1 complex subunit R...   399   e-108
ref|NP_001239641.1| uncharacterized protein LOC100806917 [Glycin...   394   e-107

>ref|XP_002297879.1| predicted protein [Populus trichocarpa] gi|222845137|gb|EEE82684.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score =  401 bits (1030), Expect = e-109
 Identities = 200/267 (74%), Positives = 220/267 (82%), Gaps = 10/267 (3%)
 Frame = +1

Query: 148 WRHNNTASAS-IISTNTQIQDADADDDYHLRSTHCSHPFNHPFH-----QLSRGFASNLI 309
           WR + + + S  +S NT     D  D     S   S P   P+       L RGF+S  +
Sbjct: 14  WRSSQSQTTSAFVSRNTAFVSDDGRD-----SAASSRPILSPYQFSFPPDLIRGFSSGAL 68

Query: 310 TPRFE----DKIPATVAAITNPTSKIIYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYAS 477
           T   +      +P TVAA+ NPTSKI+YDEHNHERYPPGDPSKRAFAYFVLTGGRFVYAS
Sbjct: 69  TSGHDMGIISDLPPTVAAVKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYAS 128

Query: 478 LIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTDDDVKLA 657
           LIRLLVLKFVLSMSASKDVLA+ASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT+DD+KLA
Sbjct: 129 LIRLLVLKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLA 188

Query: 658 NSVDVSSLRDPQEDAARVKNPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISG 837
           NSVD++SLRDPQEDAARVKNPEWL+VVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISG
Sbjct: 189 NSVDLASLRDPQEDAARVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISG 248

Query: 838 RIRKGPAPYNLEVPTYSFMEDNKLMIG 918
           RIRKGPAPYNLEVPTYSFME+NKL++G
Sbjct: 249 RIRKGPAPYNLEVPTYSFMEENKLLVG 275


>ref|XP_002512828.1| ubiquinol-cytochrome C reductase iron-sulfur subunit, putative
           [Ricinus communis] gi|223547839|gb|EEF49331.1|
           ubiquinol-cytochrome C reductase iron-sulfur subunit,
           putative [Ricinus communis]
          Length = 280

 Score =  400 bits (1029), Expect = e-109
 Identities = 196/262 (74%), Positives = 223/262 (85%), Gaps = 5/262 (1%)
 Frame = +1

Query: 148 WRHNNTASASIISTNT-QIQDADADDDYHLRSTHCSHPFNHPFHQLSRGFASNLITPRFE 324
           WR N  A+++I S N     D+ + DD   +  +    F   FH   RGF+S+ + P+ E
Sbjct: 19  WRPNQAATSAIASRNPINGGDSSSSDDVKSKVLNDYFAFRPQFHIPHRGFSSDSLMPKNE 78

Query: 325 D----KIPATVAAITNPTSKIIYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLL 492
           D    ++PATVAAI NPT KI+YDE+NHER+PPGDPSKRAFAYFVLTGGRFVYASLIRLL
Sbjct: 79  DGIVSEVPATVAAIKNPTPKIVYDEYNHERFPPGDPSKRAFAYFVLTGGRFVYASLIRLL 138

Query: 493 VLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTDDDVKLANSVDV 672
           +LK VLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT+DD+KLANSV++
Sbjct: 139 ILKLVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVEL 198

Query: 673 SSLRDPQEDAARVKNPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKG 852
           +SLRDPQ DA RVKNPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKG
Sbjct: 199 ASLRDPQPDADRVKNPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKG 258

Query: 853 PAPYNLEVPTYSFMEDNKLMIG 918
           PAPYNLEVPTYSF+++NKL+IG
Sbjct: 259 PAPYNLEVPTYSFLDENKLLIG 280


>ref|XP_002304638.1| predicted protein [Populus trichocarpa] gi|222842070|gb|EEE79617.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  400 bits (1027), Expect = e-109
 Identities = 198/262 (75%), Positives = 221/262 (84%), Gaps = 5/262 (1%)
 Frame = +1

Query: 148 WRHNNTASASIISTNTQIQDADADDDYHLRSTHCSHPFNHPFH-QLSRGFASNLITPRFE 324
           WR + T SA +   +  + D     D    S     P++  F   L RGF+S  +TP  +
Sbjct: 14  WRCSQTTSAFVSQNSPFLSDGR---DSAASSRSILSPYHLSFTPDLIRGFSSGALTPGQD 70

Query: 325 ----DKIPATVAAITNPTSKIIYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLL 492
                 +PATVAA+ NPTSKI+YDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLL
Sbjct: 71  MGIISDLPATVAAVKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLL 130

Query: 493 VLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTDDDVKLANSVDV 672
           VLKFVLSMSASKDVLA+ASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT+DD+KLANSVDV
Sbjct: 131 VLKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLANSVDV 190

Query: 673 SSLRDPQEDAARVKNPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKG 852
           +SLRDPQEDAARVK+PEWL+VVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKG
Sbjct: 191 ASLRDPQEDAARVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKG 250

Query: 853 PAPYNLEVPTYSFMEDNKLMIG 918
           PAP+NLEVPTYSF+E+NKL++G
Sbjct: 251 PAPFNLEVPTYSFLEENKLLVG 272


>ref|XP_002271311.1| PREDICTED: cytochrome b-c1 complex subunit Rieske-2, mitochondrial
           [Vitis vinifera] gi|296085532|emb|CBI29264.3| unnamed
           protein product [Vitis vinifera]
          Length = 272

 Score =  399 bits (1026), Expect = e-108
 Identities = 190/232 (81%), Positives = 207/232 (89%), Gaps = 4/232 (1%)
 Frame = +1

Query: 235 RSTHCSHPFNHPFHQLSRGFASNLITPRFE----DKIPATVAAITNPTSKIIYDEHNHER 402
           RS    H FN  F  L RGF+S  + P  +      +P TVAA+ NPTSKI+YD+HNHER
Sbjct: 41  RSISSPHLFNSEFRDLIRGFSSESLAPSHDLGMISDLPPTVAALKNPTSKIVYDDHNHER 100

Query: 403 YPPGDPSKRAFAYFVLTGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG 582
           +PPGDPSKRAFAYFVLTGGRF+YASLIRLLVLKFVLSMSASKDVLALAS+EVDLSSIEPG
Sbjct: 101 FPPGDPSKRAFAYFVLTGGRFIYASLIRLLVLKFVLSMSASKDVLALASIEVDLSSIEPG 160

Query: 583 STVTVKWRGKPVFIRRRTDDDVKLANSVDVSSLRDPQEDAARVKNPEWLIVVGVCTHLGC 762
           STVTVKWRGKPVFIRRRT+DD+KLANSVDV SLRDPQEDA RVK+PEWLIV+GVCTHLGC
Sbjct: 161 STVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQEDAVRVKDPEWLIVIGVCTHLGC 220

Query: 763 IPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFMEDNKLMIG 918
           IPLPNAGDFGGWFCPCHGSHYD+SGRIRKGPAPYNLEVPTYSF+E+NKLMIG
Sbjct: 221 IPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYSFLEENKLMIG 272


>ref|NP_001239641.1| uncharacterized protein LOC100806917 [Glycine max]
           gi|255642305|gb|ACU21417.1| unknown [Glycine max]
          Length = 264

 Score =  394 bits (1012), Expect = e-107
 Identities = 199/261 (76%), Positives = 218/261 (83%), Gaps = 4/261 (1%)
 Frame = +1

Query: 148 WRHNNTASASIISTNTQIQDADADDDYHLRSTHCSHPFNHPFHQLSRGFASNLITPRFED 327
           WR N+ ASA  +S N  + D         RS   SHP   PF    RGFA+  +    E+
Sbjct: 18  WRPNHAASA-YVSRNAVVDDR--------RSDPSSHPL-FPF----RGFATESLIHPIEN 63

Query: 328 ----KIPATVAAITNPTSKIIYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLV 495
               +IPATV A+ NPTSKI+YDEHNHER+PPGDPSKRAFAYFVLTGGRF YASL+RLLV
Sbjct: 64  SIIPEIPATVTAVKNPTSKIVYDEHNHERFPPGDPSKRAFAYFVLTGGRFAYASLVRLLV 123

Query: 496 LKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTDDDVKLANSVDVS 675
           LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT+DD+KLANSVDV 
Sbjct: 124 LKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVG 183

Query: 676 SLRDPQEDAARVKNPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGP 855
           SLRDPQ DA RVK+PEWLIV+GVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGP
Sbjct: 184 SLRDPQLDADRVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGP 243

Query: 856 APYNLEVPTYSFMEDNKLMIG 918
           APYNLEVPTY+F+E+NKLMIG
Sbjct: 244 APYNLEVPTYTFLEENKLMIG 264


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