BLASTX nr result

ID: Atractylodes22_contig00006245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00006245
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606065.1| F-box family protein [Medicago truncatula] g...    60   2e-07
ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein...    57   2e-06
emb|CBI23317.3| unnamed protein product [Vitis vinifera]               57   2e-06
emb|CAN83117.1| hypothetical protein VITISV_017709 [Vitis vinifera]    57   2e-06
ref|XP_004141639.1| PREDICTED: F-box/FBD/LRR-repeat protein At2g...    55   6e-06

>ref|XP_003606065.1| F-box family protein [Medicago truncatula]
           gi|357476019|ref|XP_003608295.1| F-box family protein
           [Medicago truncatula] gi|355507120|gb|AES88262.1| F-box
           family protein [Medicago truncatula]
           gi|355509350|gb|AES90492.1| F-box family protein
           [Medicago truncatula]
          Length = 69

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/46 (60%), Positives = 34/46 (73%)
 Frame = +1

Query: 1   PDCLLLEILSRLPSTESAIRTGTLSKRWKYLWTSVPTLIFKQGYDY 138
           PDC+LL ILS L S +  +RTG LSKRWK+LW  +PT IF QG+ Y
Sbjct: 11  PDCVLLHILSMLDS-KHRVRTGILSKRWKHLWKHIPTKIFSQGFYY 55


>ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein At3g18150-like [Vitis
           vinifera]
          Length = 665

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/63 (46%), Positives = 42/63 (66%)
 Frame = +1

Query: 1   PDCLLLEILSRLPSTESAIRTGTLSKRWKYLWTSVPTLIFKQGYDYQRPEKFSDFVSFVD 180
           PD +L+ ILS LP  ++AIRTG LSKR+ Y W S P L+F Q  +++      DF++FV+
Sbjct: 41  PDLVLVHILSFLPM-DAAIRTGVLSKRFAYKWASTPNLVFDQDSEWE----IDDFITFVN 95

Query: 181 KTL 189
           + L
Sbjct: 96  RAL 98


>emb|CBI23317.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/63 (46%), Positives = 42/63 (66%)
 Frame = +1

Query: 1   PDCLLLEILSRLPSTESAIRTGTLSKRWKYLWTSVPTLIFKQGYDYQRPEKFSDFVSFVD 180
           PD +L+ ILS LP  ++AIRTG LSKR+ Y W S P L+F Q  +++      DF++FV+
Sbjct: 41  PDLVLVHILSFLPM-DAAIRTGVLSKRFAYKWASTPNLVFDQDSEWE----IDDFITFVN 95

Query: 181 KTL 189
           + L
Sbjct: 96  RAL 98


>emb|CAN83117.1| hypothetical protein VITISV_017709 [Vitis vinifera]
          Length = 526

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/63 (46%), Positives = 42/63 (66%)
 Frame = +1

Query: 1   PDCLLLEILSRLPSTESAIRTGTLSKRWKYLWTSVPTLIFKQGYDYQRPEKFSDFVSFVD 180
           PD +L+ ILS LP  ++AIRTG LSKR+ Y W S P L+F Q  +++      DF++FV+
Sbjct: 41  PDLVLVHILSFLPM-DAAIRTGVLSKRFAYKWASTPNLVFDQDSEWE----IDDFITFVN 95

Query: 181 KTL 189
           + L
Sbjct: 96  RAL 98


>ref|XP_004141639.1| PREDICTED: F-box/FBD/LRR-repeat protein At2g26030-like [Cucumis
           sativus]
          Length = 365

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/55 (54%), Positives = 36/55 (65%)
 Frame = +1

Query: 1   PDCLLLEILSRLPSTESAIRTGTLSKRWKYLWTSVPTLIFKQGYDYQRPEKFSDF 165
           PDCLL EILS L +T+S ++T  LSKRWK LWT +PTL     +DY     FS F
Sbjct: 18  PDCLLHEILSFL-NTKSVVQTCVLSKRWKTLWTEIPTL----NFDYNSSYSFSIF 67


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